11-62444001-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444001
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444001
    reference: chr 11
allele count: 1
allele frequency: 4.704996706502305e-5
allele num: 21254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.*33C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*61C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1245C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2042C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*189C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*61C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1884C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9611
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

11-62444019-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444019
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444019
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 23858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*43A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*43A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.*15A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1227A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*171A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1866A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2024A>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22746
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-62444030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444030
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444030
    reference: chr 11
allele count: 1
allele frequency: 3.563030000712606e-5
allele num: 28066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*32C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1855C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1216C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*160C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2013C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8891
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

11-62444031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444031
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444031
    reference: chr 11
allele count: 1
allele frequency: 3.503117774819589e-5
allele num: 28546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1215C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1854C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*31C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2012C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*159C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29555
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-62444033-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444033
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444033
    reference: chr 11
allele count: 1
allele frequency: 3.365643511039311e-5
allele num: 29712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2010C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1852C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*157C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.*1C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*29C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1213C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*29C>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30200
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13744
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9128
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

11-62444034-TCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444034
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444032
    reference: chr 11
allele count: 1
allele frequency: 3.321817698644698e-5
allele num: 30104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1849_1850delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*154_*155delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.301_302delTG
  hgvsp: ENSP00000432189.1:p.Ter101Thr
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*26_*27delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1210_1211delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*26_*27delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2007_2008delTG
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13241
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ter101Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: TCA
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

11-62444035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444035
    reference: chr 11
allele count: 158
allele frequency: 5.103029520056844e-3
allele num: 30962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*27G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2008G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.302G>A
  hgvsp: ENST00000533000.1:c.302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1850G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1211G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*155G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30917
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 1.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 12485
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 9.75e1
  variant carriers: 152
genotype quality: GenotypeQuality
  all individuals: 9271
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Ter101Ter
num of homozygotes: 2
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

11-62444038-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444038
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444038
    reference: chr 11
allele count: 1
allele frequency: 2.980270608571258e-5
allele num: 33554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.299T>C
  hgvsp: ENSP00000432189.1:p.Leu100Pro
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*152T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1847T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.2005T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*24T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1208T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu100Pro
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-62444045-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444045
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444045
    reference: chr 11
allele count: 1
allele frequency: 2.560163850486431e-5
allele num: 39060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1998G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.*17G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.*17G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.292G>T
  hgvsp: ENSP00000432189.1:p.Val98Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1840G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*145G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1201G>T
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7380
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val98Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

11-62444065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444065
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444065
    reference: chr 11
allele count: 4
allele frequency: 6.383046628155619e-5
allele num: 62666
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*125C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1978C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.879C>T
  hgvsp: ENST00000529640.1:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.891C>T
  hgvsp: ENST00000301935.5:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.272C>T
  hgvsp: ENSP00000432189.1:p.Ala91Val
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1820C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1181C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala91Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-62444091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444091
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444091
    reference: chr 11
allele count: 1
allele frequency: 1.003069392340562e-5
allele num: 99694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.246C>T
  hgvsp: ENST00000533000.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1952C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1155C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.853C>T
  hgvsp: ENSP00000435964.1:p.Leu285Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1794C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*99C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.865C>T
  hgvsp: ENSP00000303991.5:p.Leu289Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.865C>T
  hgvsp: ENSP00000435625.1:p.Leu289Phe
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10589
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu289Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

11-62444102-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444102
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444102
    reference: chr 11
allele count: 1
allele frequency: 8.999118086427529e-6
allele num: 111122
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*88C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1144C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.235C>G
  hgvsp: ENSP00000432189.1:p.Leu79Val
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1783C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1941C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.854C>G
  hgvsp: ENSP00000303991.5:p.Pro285Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.842C>G
  hgvsp: ENSP00000435964.1:p.Pro281Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.854C>G
  hgvsp: ENSP00000435625.1:p.Pro285Arg
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu79Val
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/11-62444105-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444105
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444105
    reference: chr 11
allele count: 1
allele frequency: 8.832673827020915e-6
allele num: 113216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.851T>G
  hgvsp: ENSP00000435625.1:p.Val284Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1780T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1938T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1141T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.851T>G
  hgvsp: ENSP00000303991.5:p.Val284Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*85T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.839T>G
  hgvsp: ENSP00000435964.1:p.Val280Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.232T>G
  hgvsp: ENSP00000432189.1:p.Cys78Gly
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11289
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44169
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys78Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-62444106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444106
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444106
    reference: chr 11
allele count: 2
allele frequency: 1.758272672926117e-5
allele num: 113748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1140G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1937G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.850G>A
  hgvsp: ENSP00000435625.1:p.Val284Met
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1779G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.850G>A
  hgvsp: ENSP00000303991.5:p.Val284Met
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.838G>A
  hgvsp: ENSP00000435964.1:p.Val280Met
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*84G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.231G>A
  hgvsp: ENST00000533000.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val284Met
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

11-62444107-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444107
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444107
    reference: chr 11
allele count: 1
allele frequency: 8.715812226541391e-6
allele num: 114734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1936C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*83C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1139C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.849C>T
  hgvsp: ENST00000301935.5:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.837C>T
  hgvsp: ENST00000529640.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.849C>T
  hgvsp: ENST00000534176.1:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.230C>T
  hgvsp: ENSP00000432189.1:p.Ser77Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1778C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser77Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

11-62444121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444121
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444121
    reference: chr 11
allele count: 2
allele frequency: 1.666805567130594e-5
allele num: 119990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-10C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*69C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-10C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1922C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-10C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-10C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-10C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-10C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-62444124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444124
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444124
    reference: chr 11
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-13C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-13C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1919C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*66C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-13C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-13C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-13C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-13C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-62444129-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444129
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444129
    reference: chr 11
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-18G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-18G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*61G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-18G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-18G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-18G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1914G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-18G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-62444138-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444138
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444138
    reference: chr 11
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-27T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-27T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-27T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*52T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-27T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-27T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1905T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-27T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

11-62444141-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444141
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444141
    reference: chr 11
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1902T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-30T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*49T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-30T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-30T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-30T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-30T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-30T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

11-62444143-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444143
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444143
    reference: chr 11
allele count: 9
allele frequency: 7.420232500618352e-5
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-32T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-32T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*47T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-32T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1900T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-32T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-32T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-32T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 48995
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

11-62444144-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444144
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444144
    reference: chr 11
allele count: 10
allele frequency: 8.24334350012365e-5
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-33T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*46T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-33T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-33T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-33T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1899T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-33T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-33T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-62444145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444145
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444145
    reference: chr 11
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-34C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*45C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-34C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-34C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1898C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-34C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-34C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-34C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48998
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

11-62444149-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444149
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444149
    reference: chr 11
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1894T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-38T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-38T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-38T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*41T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-38T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-38T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-38T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

11-62444154-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444154
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444154
    reference: chr 11
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-43C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*36C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-43C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-43C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-43C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-43C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1889C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-43C>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/11-62444169-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444169
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444169
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-58T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-58T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-58T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1874T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*21T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-58T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-58T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-58T>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6043
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-62444176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444176
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444176
    reference: chr 11
allele count: 10
allele frequency: 8.236825198095645e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-65C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-65C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-65C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-65C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1867C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-65C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-65C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

11-62444186-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444186
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444186
    reference: chr 11
allele count: 24
allele frequency: 1.976805482340538e-4
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*4T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1857T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-75T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-75T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-75T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-75T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-75T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-75T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6035
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

11-62444187-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444187
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444187
    reference: chr 11
allele count: 12
allele frequency: 9.884027411702688e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-76A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-76A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.*3A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-76A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1856A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-76A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-76A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-76A>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

11-62444193-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444193
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444193
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.845-82G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1774-82G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-82G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.833-82G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1135-82G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.936G>A
  hgvsp: ENST00000294119.2:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1850G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.845-82G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu312Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

11-62444199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444199
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444199
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+86G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+86G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-88G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+86G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+86G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.930G>A
  hgvsp: ENST00000294119.2:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1844G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+86G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly310Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-62444201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444201
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444201
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+84G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.928G>A
  hgvsp: ENSP00000294119.2:p.Gly310Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1842G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-90G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+84G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+84G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+84G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+84G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly310Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

11-62444213-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444213
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444213
    reference: chr 11
allele count: 8
allele frequency: 6.589243060703402e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+72A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+72A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1830A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+72A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-102A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.916A>C
  hgvsp: ENSP00000294119.2:p.Met306Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+72A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+72A>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 42408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met306Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

11-62444220-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444220
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444220
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.909A>C
  hgvsp: ENSP00000294119.2:p.Lys303Asn
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+65A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+65A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+65A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-109A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1823A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+65A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+65A>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys303Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

11-62444225-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444225
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444225
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.904G>C
  hgvsp: ENSP00000294119.2:p.Gly302Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+60G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+60G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+60G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+60G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1818G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-114G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+60G>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly302Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

11-62444237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444237
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444237
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+48G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+48G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+48G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.892G>A
  hgvsp: ENSP00000294119.2:p.Glu298Lys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+48G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-126G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1806G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+48G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49196
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu298Lys
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

11-62444238-C-CCTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444238
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444241
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: CCTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+44_844+46dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1802_1804dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+44_844+46dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-130_226-128dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.888_890dupTAG
  hgvsp: ENSP00000294119.2:p.Ser296dup
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+44_1773+46dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+44_1134+46dupTAG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+44_832+46dupTAG
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49196
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser296dup
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-62444238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444238
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444238
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+47G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-127G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+47G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1805G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.891G>A
  hgvsp: ENST00000294119.2:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+47G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+47G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+47G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6037
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg297Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

11-62444243-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444243
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444242
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-133delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+41delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+41delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.885delG
  hgvsp: ENSP00000294119.2:p.Ser296ValfsTer6
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+41delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1799delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+41delG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+41delG
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser296ValfsTer6
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: TC
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/11-62444247-CCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444247
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444245
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1794_1795delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+36_832+37delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+36_844+37delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+36_1773+37delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+36_844+37delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+36_1134+37delTG
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.880_881delTG
  hgvsp: ENSP00000294119.2:p.Trp294GlyfsTer3
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-138_226-137delTG
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp294GlyfsTer3
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: CCA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS

11-62444248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444248
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444248
    reference: chr 11
allele count: 4
allele frequency: 3.294621530351701e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+37G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+37G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1795G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+37G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+37G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.881G>A
  hgvsp: ENSP00000294119.2:p.Trp294Ter
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+37G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-137G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Trp294Ter
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

11-62444249-AGTTTCTAGTCCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444236
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsp: ENSP00000294119.2:p.Arg290GlyfsTer8
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg290GlyfsTer8
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: AGTTTCTAGTCCTG
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-62444255-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444255
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444255
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+30A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+30A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+30A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+30A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-144A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+30A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.874A>G
  hgvsp: ENSP00000294119.2:p.Arg292Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1788A>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg292Gly
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-62444263-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444263
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444263
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+22C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+22C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+22C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+22C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-152C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1780C>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.866C>A
  hgvsp: ENSP00000294119.2:p.Thr289Asn
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+22C>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr289Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

11-62444270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444270
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444270
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+15C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.859C>T
  hgvsp: ENST00000294119.2:c.859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+15C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+15C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1773C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+15C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-159C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+15C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu287Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-62444275-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444275
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444275
    reference: chr 11
allele count: 126
allele frequency: 1.043668411636074e-3
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1773+10C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1134+10C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-164C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.854C>G
  hgvsp: ENSP00000294119.2:p.Ala285Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.844+10C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1768C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.844+10C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.832+10C>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 41907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 48676
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5920
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 9
hgvs: p.Ala285Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/11-62444289-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444289
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444289
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1769G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.840G>T
  hgvsp: ENSP00000435625.1:p.Glu280Asp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1754G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-178G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1130G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.828G>T
  hgvsp: ENSP00000435964.1:p.Glu276Asp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.840G>T
  hgvsp: ENSP00000294119.2:p.Glu280Asp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.840G>T
  hgvsp: ENSP00000303991.5:p.Glu280Asp
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu280Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

11-62444295-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444295
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444295
    reference: chr 11
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.834G>A
  hgvsp: ENST00000301935.5:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.834G>A
  hgvsp: ENST00000294119.2:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1124G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-184G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1763G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.834G>A
  hgvsp: ENST00000534176.1:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.822G>A
  hgvsp: ENST00000529640.1:c.822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1748G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu278Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

11-62444302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444302
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444302
    reference: chr 11
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.827G>A
  hgvsp: ENSP00000303991.5:p.Arg276Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1741G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1756G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-191G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.815G>A
  hgvsp: ENSP00000435964.1:p.Arg272Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1117G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.827G>A
  hgvsp: ENSP00000294119.2:p.Arg276Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.827G>A
  hgvsp: ENSP00000435625.1:p.Arg276Gln
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg276Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

11-62444322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444322
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444322
    reference: chr 11
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.807C>T
  hgvsp: ENST00000294119.2:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.807C>T
  hgvsp: ENST00000301935.5:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.795C>T
  hgvsp: ENST00000529640.1:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1721C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.807C>T
  hgvsp: ENST00000534176.1:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-211C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1736C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1097C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe269Phe
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-62444322-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444322
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444322
    reference: chr 11
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-211C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1721C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.807C>G
  hgvsp: ENSP00000303991.5:p.Phe269Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1736C>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.807C>G
  hgvsp: ENSP00000294119.2:p.Phe269Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.795C>G
  hgvsp: ENSP00000435964.1:p.Phe265Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.807C>G
  hgvsp: ENSP00000435625.1:p.Phe269Leu
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1097C>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe269Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum

11-62444325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444325
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444325
    reference: chr 11
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-214C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1094C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.792C>T
  hgvsp: ENST00000529640.1:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1718C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.804C>T
  hgvsp: ENST00000534176.1:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1733C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.804C>T
  hgvsp: ENST00000301935.5:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.804C>T
  hgvsp: ENST00000294119.2:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala268Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-62444328-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444328
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444328
    reference: chr 11
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1730G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.801G>T
  hgvsp: ENST00000294119.2:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.789G>T
  hgvsp: ENST00000529640.1:c.789G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.801G>T
  hgvsp: ENST00000534176.1:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-217G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.801G>T
  hgvsp: ENST00000301935.5:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1715G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1091G>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg267Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

11-62444330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444330
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444330
    reference: chr 11
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.799C>T
  hgvsp: ENSP00000294119.2:p.Arg267Trp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.799C>T
  hgvsp: ENSP00000435625.1:p.Arg267Trp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1089C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.799C>T
  hgvsp: ENSP00000303991.5:p.Arg267Trp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-219C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1728C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.787C>T
  hgvsp: ENSP00000435964.1:p.Arg263Trp
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1713C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5959
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48734
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg267Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

11-62444333-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444333
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444333
    reference: chr 11
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.796A>G
  hgvsp: ENSP00000294119.2:p.Arg266Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.796A>G
  hgvsp: ENSP00000303991.5:p.Arg266Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1725A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-222A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.784A>G
  hgvsp: ENSP00000435964.1:p.Arg262Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1710A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.796A>G
  hgvsp: ENSP00000435625.1:p.Arg266Gly
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1086A>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg266Gly
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

11-62444333-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444333
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444333
    reference: chr 11
allele count: 3
allele frequency: 2.474349246148263e-5
allele num: 121244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.784A>C
  hgvsp: ENST00000529640.1:c.784A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-222A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1086A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1725A>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.796A>C
  hgvsp: ENST00000534176.1:c.796A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.796A>C
  hgvsp: ENST00000294119.2:c.796A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.796A>C
  hgvsp: ENST00000301935.5:c.796A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1710A>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5946
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg266Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

11-62444337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444337
    reference: chr 11
allele count: 156
allele frequency: 1.30334525281556e-3
allele num: 119692
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.792C>T
  hgvsp: ENST00000294119.2:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.792C>T
  hgvsp: ENST00000534176.1:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1082C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1706C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1721C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.792C>T
  hgvsp: ENST00000301935.5:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.780C>T
  hgvsp: ENST00000529640.1:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-226C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41100
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13324
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 9.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 6
hgvs: p.Phe264Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-62444349-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444349
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444349
    reference: chr 11
allele count: 23
allele frequency: 1.897658454480949e-4
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.780G>T
  hgvsp: ENSP00000294119.2:p.Leu260Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1070G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.780G>T
  hgvsp: ENSP00000435625.1:p.Leu260Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1709G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.768G>T
  hgvsp: ENSP00000435964.1:p.Leu256Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-238G>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.780G>T
  hgvsp: ENSP00000303991.5:p.Leu260Phe
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1694G>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu260Phe
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

11-62444351-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444351
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444351
    reference: chr 11
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1068T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.766T>C
  hgvsp: ENST00000529640.1:c.766T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.778T>C
  hgvsp: ENST00000294119.2:c.778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.778T>C
  hgvsp: ENST00000534176.1:c.778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1707T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.778T>C
  hgvsp: ENST00000301935.5:c.778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1692T>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-240T>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu260Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-62444352-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444352
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444352
    reference: chr 11
allele count: 10
allele frequency: 8.252867871585376e-5
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1691A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.777A>G
  hgvsp: ENST00000534176.1:c.777A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-241A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1067A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.777A>G
  hgvsp: ENST00000294119.2:c.777A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.777A>G
  hgvsp: ENST00000301935.5:c.777A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1706A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.765A>G
  hgvsp: ENST00000529640.1:c.765A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln259Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-62444378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444378
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444378
    reference: chr 11
allele count: 4
allele frequency: 3.309395373465268e-5
allele num: 120868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.739C>T
  hgvsp: ENST00000529640.1:c.739C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.751C>T
  hgvsp: ENST00000294119.2:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.751C>T
  hgvsp: ENST00000534176.1:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1041C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.473C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.751C>T
  hgvsp: ENST00000301935.5:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1680C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1665C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-267C>T
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5870
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu251Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

11-62444381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444381
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444381
    reference: chr 11
allele count: 2
allele frequency: 1.655492095025246e-5
allele num: 120810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1662G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1038G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-270G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.470G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.748G>A
  hgvsp: ENSP00000435625.1:p.Glu250Lys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1677G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.736G>A
  hgvsp: ENSP00000435964.1:p.Glu246Lys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.748G>A
  hgvsp: ENSP00000303991.5:p.Glu250Lys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.748G>A
  hgvsp: ENSP00000294119.2:p.Glu250Lys
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu250Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

11-62444382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444382
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444382
    reference: chr 11
allele count: 1
allele frequency: 8.278008642241022e-6
allele num: 120802
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.747G>A
  hgvsp: ENST00000294119.2:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.469G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1661G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.735G>A
  hgvsp: ENST00000529640.1:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.747G>A
  hgvsp: ENST00000301935.5:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.747G>A
  hgvsp: ENST00000534176.1:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1037G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1676G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-271G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu249Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

11-62444384-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444384
    reference: chr 11
allele count: 739
allele frequency: 6.118562675939725e-3
allele num: 120780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-273G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1659G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.745G>C
  hgvsp: ENSP00000303991.5:p.Glu249Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.467G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.745G>C
  hgvsp: ENSP00000435625.1:p.Glu249Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1035G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.733G>C
  hgvsp: ENSP00000435964.1:p.Glu245Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1674G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.745G>C
  hgvsp: ENSP00000294119.2:p.Glu249Gln
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40457
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 642
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13559
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu249Gln
num of homozygotes: 5
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ

11-62444387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444387
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444387
    reference: chr 11
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-276G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1671G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.742G>A
  hgvsp: ENSP00000294119.2:p.Gly248Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1656G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.742G>A
  hgvsp: ENSP00000435625.1:p.Gly248Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.730G>A
  hgvsp: ENSP00000435964.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.464G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.742G>A
  hgvsp: ENSP00000303991.5:p.Gly248Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1032G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly248Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-62444389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444389
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444389
    reference: chr 11
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.728G>A
  hgvsp: ENSP00000435964.1:p.Arg243His
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.740G>A
  hgvsp: ENSP00000435625.1:p.Arg247His
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.740G>A
  hgvsp: ENSP00000294119.2:p.Arg247His
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1669G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-278G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1030G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.740G>A
  hgvsp: ENSP00000303991.5:p.Arg247His
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.462G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1654G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg247His
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-62444390-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444390
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444390
    reference: chr 11
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.461C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1668C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1653C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1029C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.739C>T
  hgvsp: ENSP00000435625.1:p.Arg247Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.739C>T
  hgvsp: ENSP00000294119.2:p.Arg247Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-279C>T
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.727C>T
  hgvsp: ENSP00000435964.1:p.Arg243Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.739C>T
  hgvsp: ENSP00000303991.5:p.Arg247Cys
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg247Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

11-62444404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444404
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444404
    reference: chr 11
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.1015A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1654A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-293A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.447A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1639A>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.713A>G
  hgvsp: ENSP00000435964.1:p.Tyr238Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.725A>G
  hgvsp: ENSP00000294119.2:p.Tyr242Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.725A>G
  hgvsp: ENSP00000435625.1:p.Tyr242Cys
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.725A>G
  hgvsp: ENSP00000303991.5:p.Tyr242Cys
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr242Cys
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-62444422-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444422
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444422
    reference: chr 11
allele count: 1
allele frequency: 8.345712807330875e-6
allele num: 119822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1636T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.707T>G
  hgvsp: ENSP00000294119.2:p.Leu236Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.429T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.707T>G
  hgvsp: ENSP00000435625.1:p.Leu236Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.695T>G
  hgvsp: ENSP00000435964.1:p.Leu232Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.997T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.707T>G
  hgvsp: ENSP00000303991.5:p.Leu236Arg
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1621T>G
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-311T>G
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu236Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

11-62444430-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444430
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444430
    reference: chr 11
allele count: 30
allele frequency: 2.511426992817319e-4
allele num: 119454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.421G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-319G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.699G>C
  hgvsp: ENST00000534176.1:c.699G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.687G>C
  hgvsp: ENST00000529640.1:c.687G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.699G>C
  hgvsp: ENST00000301935.5:c.699G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1628G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1613G>C
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.699G>C
  hgvsp: ENST00000294119.2:c.699G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.989G>C
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13346
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 39709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46873
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg233Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

11-62444431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62444431
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 62444431
    reference: chr 11
allele count: 1
allele frequency: 8.37408722449253e-6
allele num: 119416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525717
  gene symbol: UBXN1
  hgvsc: ENST00000525717.1:n.988G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000532904
  gene symbol: UBXN1
  hgvsc: ENST00000532904.1:n.1612G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000525004
  gene symbol: UBXN1
  hgvsc: ENST00000525004.1:n.420G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435625
  ensembl transcript: ENST00000534176
  gene symbol: UBXN1
  hgvsc: ENST00000534176.1:c.698G>A
  hgvsp: ENSP00000435625.1:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000303991
  ensembl transcript: ENST00000301935
  gene symbol: UBXN1
  hgvsc: ENST00000301935.5:c.698G>A
  hgvsp: ENSP00000303991.5:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000294119
  ensembl transcript: ENST00000294119
  gene symbol: UBXN1
  hgvsc: ENST00000294119.2:c.698G>A
  hgvsp: ENSP00000294119.2:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162191
  ensembl transcript: ENST00000533476
  gene symbol: UBXN1
  hgvsc: ENST00000533476.1:n.1627G>A
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000435964
  ensembl transcript: ENST00000529640
  gene symbol: UBXN1
  hgvsc: ENST00000529640.1:c.686G>A
  hgvsp: ENSP00000435964.1:p.Arg229Gln
  variant of: http://identifiers.org/hgnc/18402
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162191
  ensembl protein: ENSP00000432189
  ensembl transcript: ENST00000533000
  gene symbol: UBXN1
  hgvsc: ENST00000533000.1:c.226-320G>A
  variant of: http://identifiers.org/hgnc/18402
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 3
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg233Gln
num of homozygotes: 0
reference allele: C

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.032520325203252e-3
allele num: 492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.21326e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.58e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.493e0

QD
type: SiteQuality
SIO_000300: 1.251e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1828
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2004
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.17e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 1.0e0

VQSLOD
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SIO_000300: -3.236e0

BaseQRankSum
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SIO_000300: 2.05e0

MQRankSum
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SIO_000300: -1.422e0

ClippingRankSum
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SIO_000300: -1.422e0

QD
type: SiteQuality
SIO_000300: 3.63e0

DP
type: SiteQuality
SIO_000300: 5.05714e5

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2132
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.135073779795687e-4
allele num: 8810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12584
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 918
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.05e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 4.615e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 5.80191e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

African
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allele frequency: 0.0e0
allele num: 2546
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 7.763975155279503e-5
allele num: 12880
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 948
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
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SIO_000300: -2.97e-2

VQSLOD
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SIO_000300: -1.207e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 5.84435e5

MQ
type: SiteQuality
SIO_000300: 5.875e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.387e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 9.652509652509653e-4
allele num: 1036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2198
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.725e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.064e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.96457e5

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2230
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1074
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13832
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

South Asian
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allele frequency: 1.114081996434938e-4
allele num: 8976
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2736
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

DP
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SIO_000300: 6.03335e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.791e0

MQRankSum
type: SiteQuality
SIO_000300: 6.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.466e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ClippingRankSum
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SIO_000300: -1.154e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 3.563791874554526e-4
allele num: 2806
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Other
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allele num: 332
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.465e0

BaseQRankSum
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MQRankSum
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DP
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SIO_000300: 6.15838e5

ReadPosRankSum
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SIO_000300: 4.85e-1

ClippingRankSum
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SIO_000300: -1.9e-1

InbreedingCoeff
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SIO_000300: -2.49e-2

VQSLOD
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele num: 3096
num of homozygotes: 0

East Asian
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Latino
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allele num: 1170
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.534e1

InbreedingCoeff
type: SiteQuality
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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SIO_000300: -8.25e-1

DP
type: SiteQuality
SIO_000300: 6.41504e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

European (Non-Finnish)
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allele num: 19142
num of homozygotes: 0

Latino
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allele num: 1532
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Other
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allele num: 398
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European (Finnish)
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East Asian
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South Asian
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QD
type: SiteQuality
SIO_000300: 1.229e1

VQSLOD
type: SiteQuality
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3714
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.389256058295204e-4
allele num: 11802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33358
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

DP
type: SiteQuality
SIO_000300: 8.83559e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.794e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14588
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5854
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.3e-3

QD
type: SiteQuality
SIO_000300: 1.575e1

VQSLOD
type: SiteQuality
SIO_000300: -1.742e-1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.642305797339464e-5
allele num: 60890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQRankSum
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SIO_000300: 5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.537e0

DP
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SIO_000300: 1.32352e6

InbreedingCoeff
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SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

QD
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SIO_000300: 1.322e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.455370650529501e-5
allele num: 10576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.435e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

DP
type: SiteQuality
SIO_000300: 1.346127e6

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 2.413e1

VQSLOD
type: SiteQuality
SIO_000300: -2.562e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.87e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.303580433686334e-5
allele num: 15864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.279754287176862e-4
allele num: 7814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62364
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

FS
type: SiteQuality
SIO_000300: 3.726e0

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.648e0

DP
type: SiteQuality
SIO_000300: 1.35481e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590077913817777e-5
allele num: 62890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65930
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 1.213886865744113e-4
allele num: 16476
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
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South Asian
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Other
type: Population
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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African
type: Population
allele count: 0
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Latino
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East Asian
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allele num: 8558
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MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 319
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variant carriers: 1

GenotypeQuality
all individuals: 1018
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.098e0

QD
type: SiteQuality
SIO_000300: 1.474e1

DP
type: SiteQuality
SIO_000300: 1.43707e6

FS
type: SiteQuality
SIO_000300: 1.688e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999760019198464e-5
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.097e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.438041e6

FS
type: SiteQuality
SIO_000300: 6.089e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.451241671714113e-4
allele num: 16510
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: -1.787e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.38e-2

DP
type: SiteQuality
SIO_000300: 1.438562e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.779e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.156604210039325e-3
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.254e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.438895e6

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 339
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.817e0

FS
type: SiteQuality
SIO_000300: 3.408e0

DP
type: SiteQuality
SIO_000300: 1.438779e6

VQSLOD
type: SiteQuality
SIO_000300: -2.465e0

QD
type: SiteQuality
SIO_000300: 2.501e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 340
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

FS
type: SiteQuality
SIO_000300: 2.611e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.141e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

DP
type: SiteQuality
SIO_000300: 1.439106e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.428e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.394e0

VQSLOD
type: SiteQuality
SIO_000300: -1.367e0

DP
type: SiteQuality
SIO_000300: 1.439398e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 1.682e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

DP
type: SiteQuality
SIO_000300: 1.439728e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.048940570024275e-4
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.334e0

DP
type: SiteQuality
SIO_000300: 1.440498e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

QD
type: SiteQuality
SIO_000300: 1.321e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 336
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1826
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 1020
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GenotypeQuality
all individuals: 334
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variant carriers: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.45366444579043e-3
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
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Other
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allele frequency: 0.0e0
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.968e1

ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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SIO_000300: -3.14e-1

MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.440011e6

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 8.990380293086398e-5
allele num: 66738
num of homozygotes: 0

East Asian
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African
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allele num: 10406
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Latino
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allele num: 11578
num of homozygotes: 0

VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Other
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Latino
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European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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allele num: 16512
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African
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East Asian
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European (Finnish)
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Other
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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Other
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South Asian
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DP
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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South Asian
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Latino
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Other
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FS
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QD
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DP
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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South Asian
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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Other
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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African
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Other
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Latino
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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ReadPosRankSum
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MQ
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FS
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ClippingRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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Latino
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South Asian
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African
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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South Asian
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
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FS
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ReadPosRankSum
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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East Asian
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South Asian
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European (Non-Finnish)
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MQ
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: 2.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.902e1

FS
type: SiteQuality
SIO_000300: 1.02581e2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 1.451606e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

QD
type: SiteQuality
SIO_000300: 1.075e1

FS
type: SiteQuality
SIO_000300: 3.808e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.978e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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QD
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BaseQRankSum
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SIO_000300: -5.885e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

FS
type: SiteQuality
SIO_000300: 7.73e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

DP
type: SiteQuality
SIO_000300: 1.451504e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 2.761e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

FS
type: SiteQuality
SIO_000300: 2.505e0

DP
type: SiteQuality
SIO_000300: 1.451311e6

VQSLOD
type: SiteQuality
SIO_000300: -1.712e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.637e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.449412e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.264e1

VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.449412e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

East Asian
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allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.315e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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Other
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European (Finnish)
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BaseQRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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East Asian
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VQSLOD
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 3.0489e1

DP
type: SiteQuality
SIO_000300: 1.448826e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.985e0

QD
type: SiteQuality
SIO_000300: 2.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001020346917952e-5
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
type: SiteQuality
SIO_000300: 1.448826e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.985e0

FS
type: SiteQuality
SIO_000300: 3.0489e1

QD
type: SiteQuality
SIO_000300: 2.97e0

VQSLOD
type: SiteQuality
SIO_000300: -5.465e0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 47889
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 279
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 380
bin: 9.75e1
variant carriers: 68

GenotypeQuality
all individuals: 5776
bin: 6.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 15
allele frequency: 2.335720959202741e-3
allele num: 6422
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.588610115491836e-3
allele num: 10044
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 106
allele frequency: 1.613492450073064e-3
allele num: 65696
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.201109570041609e-4
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.242152466367713e-3
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.52e0

VQSLOD
type: SiteQuality
SIO_000300: -8.569e1

DP
type: SiteQuality
SIO_000300: 1.540301e6

FS
type: SiteQuality
SIO_000300: 1.32409e2

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 6.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.568e0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 19
allele frequency: 2.874432677760968e-3
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502476361999099e-5
allele num: 66630
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 1.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.258e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.076e0

DP
type: SiteQuality
SIO_000300: 1.455266e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48664
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

FS
type: SiteQuality
SIO_000300: 4.499e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.756e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

DP
type: SiteQuality
SIO_000300: 1.452469e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 2.122e1

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.920415224913495e-4
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

FS
type: SiteQuality
SIO_000300: 1.113e0

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

QD
type: SiteQuality
SIO_000300: 1.495e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

DP
type: SiteQuality
SIO_000300: 1.453476e6

GenotypeQuality
all individuals: 466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.88651379712398e-4
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.261e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.739e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 1.446714e6

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48192
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5867
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011231894968231e-5
allele num: 66418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.18e0

DP
type: SiteQuality
SIO_000300: 1.445456e6

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

FS
type: SiteQuality
SIO_000300: 5.284e0

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.344e1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

FS
type: SiteQuality
SIO_000300: 2.763e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

DP
type: SiteQuality
SIO_000300: 1.445246e6

GenotypeQuality
all individuals: 995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 9.75e1
variant carriers: 733

GenotypeQuality
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47723
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5765
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 25
allele frequency: 2.169009196598994e-3
allele num: 11526
num of homozygotes: 0

African
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allele count: 13
allele frequency: 1.266562743569758e-3
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 599
allele frequency: 9.020812626125719e-3
allele num: 66402
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 81
allele frequency: 1.226900939109361e-2
allele num: 6602
num of homozygotes: 1

South Asian
type: Population
allele count: 14
allele frequency: 8.492053863884508e-4
allele num: 16486
num of homozygotes: 1

Other
type: Population
allele count: 7
allele frequency: 7.72626931567329e-3
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

FS
type: SiteQuality
SIO_000300: 3.47e0

QD
type: SiteQuality
SIO_000300: 1.369e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

DP
type: SiteQuality
SIO_000300: 1.533473e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 622
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.44859e6

MQRankSum
type: SiteQuality
SIO_000300: -2.52e-1

FS
type: SiteQuality
SIO_000300: 8.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.806e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.157e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

QD
type: SiteQuality
SIO_000300: 4.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 4.561e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

DP
type: SiteQuality
SIO_000300: 1.448114e6

VQSLOD
type: SiteQuality
SIO_000300: -3.078e-1

QD
type: SiteQuality
SIO_000300: 1.039e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 343
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.406e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.69e-1

FS
type: SiteQuality
SIO_000300: 3.839e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.448061e6

VQSLOD
type: SiteQuality
SIO_000300: 5.53e-1

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47823
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
bin: 4.75e1
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GenotypeQuality
all individuals: 1806
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511030522816561e-5
allele num: 66180
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.444214e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.039999999999999e0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

FS
type: SiteQuality
SIO_000300: 4.022e0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.08e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519664458087654e-5
allele num: 65804
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

DP
type: SiteQuality
SIO_000300: 1.435091e6

MQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 2.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.331e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 30

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1800
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GenotypeQuality
all individuals: 342
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.117611175501739e-4
allele num: 65572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740644038294169e-4
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.432686e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.361e1

MQ
type: SiteQuality
SIO_000300: 5.973e1