16-71065550-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065550
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065550
    reference: chr 16
allele count: 1
allele frequency: 8.757487651942411e-6
allele num: 114188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.*28A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.322+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2768+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1288A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*773A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.*28A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2768+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2016+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2768+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2768+32A>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1622+32A>C
  variant of: http://identifiers.org/hgnc/19368
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

16-71065560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065560
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065560
    reference: chr 16
allele count: 17
allele frequency: 1.47772118009075e-4
allele num: 115042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.322+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2768+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2768+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.*18G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1278G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2768+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*763G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.*18G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1622+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2016+22G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2768+22G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15577
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17788
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

16-71065565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065565
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065565
    reference: chr 16
allele count: 2
allele frequency: 1.738404839719074e-5
allele num: 115048
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2768+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.322+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2016+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*758G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.*13G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2768+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1273G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2768+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.*13G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2768+17G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1622+17G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15268
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

16-71065577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065577
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065577
    reference: chr 16
allele count: 1
allele frequency: 8.734387282732117e-6
allele num: 114490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2016+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*746G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2768+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1622+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2768+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.322+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2768+5G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1261G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2768+5G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2768+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/16-71065587-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065587
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065587
    reference: chr 16
allele count: 4
allele frequency: 3.528519256893845e-5
allele num: 113362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2844T>G
  hgvsp: ENSP00000444970.1:p.His948Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.317T>G
  hgvsp: ENSP00000462031.1:p.His106Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2763T>G
  hgvsp: ENSP00000394826.1:p.His921Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2011T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2763T>G
  hgvsp: ENSP00000377197.2:p.His921Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1617T>G
  hgvsp: ENSP00000463767.1:p.His539Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*736T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2763T>G
  hgvsp: ENSP00000398544.2:p.His921Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1251T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2763T>G
  hgvsp: ENSP00000314736.5:p.His921Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2814T>G
  hgvsp: ENSP00000437341.1:p.His938Gln
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His921Gln
num of homozygotes: 1
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-71065589-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065589
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065589
    reference: chr 16
allele count: 1
allele frequency: 8.832829862031198e-6
allele num: 113214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*734C>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1249C>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2761C>G
  hgvsp: ENSP00000314736.5:p.His921Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2842C>G
  hgvsp: ENSP00000444970.1:p.His948Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2009C>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.315C>G
  hgvsp: ENSP00000462031.1:p.His106Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2761C>G
  hgvsp: ENSP00000398544.2:p.His921Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2812C>G
  hgvsp: ENSP00000437341.1:p.His938Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1615C>G
  hgvsp: ENSP00000463767.1:p.His539Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2761C>G
  hgvsp: ENSP00000394826.1:p.His921Asp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2761C>G
  hgvsp: ENSP00000377197.2:p.His921Asp
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His921Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-71065593-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065593
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065593
    reference: chr 16
allele count: 1
allele frequency: 8.904560916101227e-6
allele num: 112302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.311G>A
  hgvsp: ENST00000538568.1:c.311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1245G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2757G>A
  hgvsp: ENST00000393567.2:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1611G>A
  hgvsp: ENST00000393552.2:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2757G>A
  hgvsp: ENST00000321489.5:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2808G>A
  hgvsp: ENST00000541601.1:c.2808G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2005G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2838G>A
  hgvsp: ENST00000538248.1:c.2838G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*730G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2757G>A
  hgvsp: ENST00000448089.2:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2757G>A
  hgvsp: ENST00000448691.1:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly919Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

16-71065595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065595
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065595
    reference: chr 16
allele count: 1
allele frequency: 8.931123178050872e-6
allele num: 111968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2836G>A
  hgvsp: ENSP00000444970.1:p.Gly946Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2755G>A
  hgvsp: ENSP00000314736.5:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1243G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*728G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2755G>A
  hgvsp: ENSP00000398544.2:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2806G>A
  hgvsp: ENSP00000437341.1:p.Gly936Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2755G>A
  hgvsp: ENSP00000394826.1:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.309G>A
  hgvsp: ENSP00000462031.1:p.Gly104Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2003G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2755G>A
  hgvsp: ENSP00000377197.2:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1609G>A
  hgvsp: ENSP00000463767.1:p.Gly537Arg
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17248
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly919Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/16-71065598-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065598
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065598
    reference: chr 16
allele count: 3
allele frequency: 2.707092582566324e-5
allele num: 110820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.306T>G
  hgvsp: ENSP00000462031.1:p.Leu103Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2752T>G
  hgvsp: ENSP00000314736.5:p.Leu918Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2752T>G
  hgvsp: ENSP00000398544.2:p.Leu918Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2000T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1606T>G
  hgvsp: ENSP00000463767.1:p.Leu536Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2752T>G
  hgvsp: ENSP00000377197.2:p.Leu918Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2833T>G
  hgvsp: ENSP00000444970.1:p.Leu945Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2752T>G
  hgvsp: ENSP00000394826.1:p.Leu918Val
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*725T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1240T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2803T>G
  hgvsp: ENSP00000437341.1:p.Leu935Val
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu918Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

16-71065598-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065598
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065598
    reference: chr 16
allele count: 1
allele frequency: 9.023641941887745e-6
allele num: 110820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2752T>C
  hgvsp: ENST00000448691.1:c.2752T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1606T>C
  hgvsp: ENST00000393552.2:c.1606T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2833T>C
  hgvsp: ENST00000538248.1:c.2833T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2752T>C
  hgvsp: ENST00000448089.2:c.2752T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*2000T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2752T>C
  hgvsp: ENST00000393567.2:c.2752T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2803T>C
  hgvsp: ENST00000541601.1:c.2803T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2752T>C
  hgvsp: ENST00000321489.5:c.2752T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1240T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.306T>C
  hgvsp: ENST00000538568.1:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*725T>C
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu918Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-71065599-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065599
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065599
    reference: chr 16
allele count: 5
allele frequency: 4.535641067508482e-5
allele num: 110238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1605T>C
  hgvsp: ENST00000393552.2:c.1605T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2751T>C
  hgvsp: ENST00000393567.2:c.2751T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1999T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2751T>C
  hgvsp: ENST00000448691.1:c.2751T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.305T>C
  hgvsp: ENST00000538568.1:c.305T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2751T>C
  hgvsp: ENST00000448089.2:c.2751T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2832T>C
  hgvsp: ENST00000538248.1:c.2832T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2802T>C
  hgvsp: ENST00000541601.1:c.2802T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2751T>C
  hgvsp: ENST00000321489.5:c.2751T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*724T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1239T>C
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16846
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn917Asn
num of homozygotes: 1
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

16-71065599-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065599
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065599
    reference: chr 16
allele count: 6
allele frequency: 5.442769281010178e-5
allele num: 110238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.305T>A
  hgvsp: ENSP00000462031.1:p.Asn102Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2751T>A
  hgvsp: ENSP00000314736.5:p.Asn917Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2802T>A
  hgvsp: ENSP00000437341.1:p.Asn934Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1999T>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2751T>A
  hgvsp: ENSP00000394826.1:p.Asn917Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1605T>A
  hgvsp: ENSP00000463767.1:p.Asn535Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2832T>A
  hgvsp: ENSP00000444970.1:p.Asn944Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2751T>A
  hgvsp: ENSP00000398544.2:p.Asn917Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1239T>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2751T>A
  hgvsp: ENSP00000377197.2:p.Asn917Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*724T>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn917Lys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-71065600-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065600
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065600
    reference: chr 16
allele count: 2
allele frequency: 1.820465675119695e-5
allele num: 109862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1998A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2750A>G
  hgvsp: ENSP00000314736.5:p.Asn917Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1238A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*723A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2831A>G
  hgvsp: ENSP00000444970.1:p.Asn944Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1604A>G
  hgvsp: ENSP00000463767.1:p.Asn535Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2801A>G
  hgvsp: ENSP00000437341.1:p.Asn934Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2750A>G
  hgvsp: ENSP00000394826.1:p.Asn917Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.304A>G
  hgvsp: ENSP00000462031.1:p.Asn102Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2750A>G
  hgvsp: ENSP00000398544.2:p.Asn917Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2750A>G
  hgvsp: ENSP00000377197.2:p.Asn917Ser
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn917Ser
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

16-71065614-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065614
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065614
    reference: chr 16
allele count: 3
allele frequency: 3.01993154821824e-5
allele num: 99340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2736T>A
  hgvsp: ENSP00000398544.2:p.Phe912Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2736T>A
  hgvsp: ENSP00000394826.1:p.Phe912Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2817T>A
  hgvsp: ENSP00000444970.1:p.Phe939Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2736T>A
  hgvsp: ENSP00000377197.2:p.Phe912Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1224T>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1590T>A
  hgvsp: ENSP00000463767.1:p.Phe530Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.290T>A
  hgvsp: ENSP00000462031.1:p.Phe97Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*709T>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2736T>A
  hgvsp: ENSP00000314736.5:p.Phe912Leu
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1984T>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2787T>A
  hgvsp: ENSP00000437341.1:p.Phe929Leu
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe912Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-71065619-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065619
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065619
    reference: chr 16
allele count: 1
allele frequency: 1.095074355548742e-5
allele num: 91318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2731C>T
  hgvsp: ENSP00000398544.2:p.Pro911Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2731C>T
  hgvsp: ENSP00000394826.1:p.Pro911Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2731C>T
  hgvsp: ENSP00000377197.2:p.Pro911Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1219C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2731C>T
  hgvsp: ENSP00000314736.5:p.Pro911Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1585C>T
  hgvsp: ENSP00000463767.1:p.Pro529Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2812C>T
  hgvsp: ENSP00000444970.1:p.Pro938Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.285C>T
  hgvsp: ENSP00000462031.1:p.Pro96Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1979C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2782C>T
  hgvsp: ENSP00000437341.1:p.Pro928Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*704C>T
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro911Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-71065628-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065628
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065628
    reference: chr 16
allele count: 1
allele frequency: 1.344375134437514e-5
allele num: 74384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2722T>G
  hgvsp: ENSP00000398544.2:p.Ser908Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.276T>G
  hgvsp: ENSP00000462031.1:p.Ser93Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2773T>G
  hgvsp: ENSP00000437341.1:p.Ser925Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2722T>G
  hgvsp: ENSP00000377197.2:p.Ser908Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1576T>G
  hgvsp: ENSP00000463767.1:p.Ser526Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2722T>G
  hgvsp: ENSP00000314736.5:p.Ser908Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1210T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1970T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2722T>G
  hgvsp: ENSP00000394826.1:p.Ser908Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*695T>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2803T>G
  hgvsp: ENSP00000444970.1:p.Ser935Ala
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser908Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

16-71065649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065649
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065649
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 64890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1555G>A
  hgvsp: ENSP00000463767.1:p.Gly519Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2701G>A
  hgvsp: ENSP00000398544.2:p.Gly901Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2782G>A
  hgvsp: ENSP00000444970.1:p.Gly928Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*674G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.255G>A
  hgvsp: ENSP00000462031.1:p.Gly86Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2752G>A
  hgvsp: ENSP00000437341.1:p.Gly918Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1949G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2701G>A
  hgvsp: ENSP00000394826.1:p.Gly901Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2701G>A
  hgvsp: ENSP00000314736.5:p.Gly901Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2701G>A
  hgvsp: ENSP00000377197.2:p.Gly901Arg
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1189G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly901Arg
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

16-71065650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065650
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065650
    reference: chr 16
allele count: 2
allele frequency: 3.125976867771179e-5
allele num: 63980
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2700C>T
  hgvsp: ENST00000393567.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1188C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2700C>T
  hgvsp: ENST00000321489.5:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2700C>T
  hgvsp: ENST00000448089.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*673C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2700C>T
  hgvsp: ENST00000448691.1:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1554C>T
  hgvsp: ENST00000393552.2:c.1554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2781C>T
  hgvsp: ENST00000538248.1:c.2781C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.254C>T
  hgvsp: ENST00000538568.1:c.254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2751C>T
  hgvsp: ENST00000541601.1:c.2751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1948C>T
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19813
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser900Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

16-71065653-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065653
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065653
    reference: chr 16
allele count: 1
allele frequency: 1.568922777620886e-5
allele num: 63738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1185T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1945T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2697T>C
  hgvsp: ENST00000321489.5:c.2697T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1551T>C
  hgvsp: ENST00000393552.2:c.1551T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2697T>C
  hgvsp: ENST00000448691.1:c.2697T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2748T>C
  hgvsp: ENST00000541601.1:c.2748T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.251T>C
  hgvsp: ENST00000538568.1:c.251T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2778T>C
  hgvsp: ENST00000538248.1:c.2778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*670T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2697T>C
  hgvsp: ENST00000393567.2:c.2697T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2697T>C
  hgvsp: ENST00000448089.2:c.2697T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala899Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

16-71065660-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065660
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065660
    reference: chr 16
allele count: 1
allele frequency: 1.62295507660348e-5
allele num: 61616
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.244T>C
  hgvsp: ENSP00000462031.1:p.Val82Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2690T>C
  hgvsp: ENSP00000314736.5:p.Val897Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2690T>C
  hgvsp: ENSP00000398544.2:p.Val897Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1544T>C
  hgvsp: ENSP00000463767.1:p.Val515Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2690T>C
  hgvsp: ENSP00000394826.1:p.Val897Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*663T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1178T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2771T>C
  hgvsp: ENSP00000444970.1:p.Val924Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1938T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2741T>C
  hgvsp: ENSP00000437341.1:p.Val914Ala
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2690T>C
  hgvsp: ENSP00000377197.2:p.Val897Ala
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val897Ala
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-71065668-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065668
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065668
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 58678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1170G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2682G>T
  hgvsp: ENST00000448089.2:c.2682G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1536G>T
  hgvsp: ENST00000393552.2:c.1536G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1930G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*655G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2682G>T
  hgvsp: ENST00000448691.1:c.2682G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2763G>T
  hgvsp: ENST00000538248.1:c.2763G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2682G>T
  hgvsp: ENST00000393567.2:c.2682G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2682G>T
  hgvsp: ENST00000321489.5:c.2682G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2733G>T
  hgvsp: ENST00000541601.1:c.2733G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.236G>T
  hgvsp: ENST00000538568.1:c.236G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23806
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg894Arg
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

16-71065669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065669
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065669
    reference: chr 16
allele count: 1
allele frequency: 1.708467163261122e-5
allele num: 58532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2681G>A
  hgvsp: ENSP00000398544.2:p.Arg894Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2681G>A
  hgvsp: ENSP00000394826.1:p.Arg894Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.235G>A
  hgvsp: ENSP00000462031.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2762G>A
  hgvsp: ENSP00000444970.1:p.Arg921Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1535G>A
  hgvsp: ENSP00000463767.1:p.Arg512Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1929G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*654G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2681G>A
  hgvsp: ENSP00000314736.5:p.Arg894Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2732G>A
  hgvsp: ENSP00000437341.1:p.Arg911Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2681G>A
  hgvsp: ENSP00000377197.2:p.Arg894Gln
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1169G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg894Gln
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

16-71065670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065670
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065670
    reference: chr 16
allele count: 2
allele frequency: 3.475842891901286e-5
allele num: 57540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2761C>T
  hgvsp: ENSP00000444970.1:p.Arg921Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2680C>T
  hgvsp: ENSP00000314736.5:p.Arg894Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.234C>T
  hgvsp: ENSP00000462031.1:p.Arg79Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2680C>T
  hgvsp: ENSP00000394826.1:p.Arg894Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1928C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1534C>T
  hgvsp: ENSP00000463767.1:p.Arg512Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2680C>T
  hgvsp: ENSP00000377197.2:p.Arg894Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2731C>T
  hgvsp: ENSP00000437341.1:p.Arg911Trp
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*653C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1168C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2680C>T
  hgvsp: ENSP00000398544.2:p.Arg894Trp
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19150
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg894Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

16-71065680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065680
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065680
    reference: chr 16
allele count: 51
allele frequency: 9.043194552805163e-4
allele num: 56396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1524C>T
  hgvsp: ENST00000393552.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2670C>T
  hgvsp: ENST00000448691.1:c.2670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1158C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2721C>T
  hgvsp: ENST00000541601.1:c.2721C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2670C>T
  hgvsp: ENST00000393567.2:c.2670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2670C>T
  hgvsp: ENST00000448089.2:c.2670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2751C>T
  hgvsp: ENST00000538248.1:c.2751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2670C>T
  hgvsp: ENST00000321489.5:c.2670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*643C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1918C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.224C>T
  hgvsp: ENST00000538568.1:c.224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18458
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser890Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP

16-71065688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065688
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065688
    reference: chr 16
allele count: 1
allele frequency: 1.791215877337537e-5
allele num: 55828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1910G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*635G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.216G>A
  hgvsp: ENSP00000462031.1:p.Glu73Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2662G>A
  hgvsp: ENSP00000314736.5:p.Glu888Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2713G>A
  hgvsp: ENSP00000437341.1:p.Glu905Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2662G>A
  hgvsp: ENSP00000394826.1:p.Glu888Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2662G>A
  hgvsp: ENSP00000377197.2:p.Glu888Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2662G>A
  hgvsp: ENSP00000398544.2:p.Glu888Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1150G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1516G>A
  hgvsp: ENSP00000463767.1:p.Glu506Lys
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2743G>A
  hgvsp: ENSP00000444970.1:p.Glu915Lys
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18197
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu888Lys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

16-71065694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065694
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065694
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 55806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.210G>A
  hgvsp: ENSP00000462031.1:p.Asp71Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2656G>A
  hgvsp: ENSP00000314736.5:p.Asp886Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1904G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2656G>A
  hgvsp: ENSP00000394826.1:p.Asp886Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2656G>A
  hgvsp: ENSP00000398544.2:p.Asp886Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2656G>A
  hgvsp: ENSP00000377197.2:p.Asp886Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2707G>A
  hgvsp: ENSP00000437341.1:p.Asp903Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2737G>A
  hgvsp: ENSP00000444970.1:p.Asp913Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1510G>A
  hgvsp: ENSP00000463767.1:p.Asp504Asn
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1144G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*629G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26072
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp886Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-71065701-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065701
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065699
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 56192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*620_*621delGT
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1501_1502delGT
  hgvsp: ENSP00000463767.1:p.Val501TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2728_2729delGT
  hgvsp: ENSP00000444970.1:p.Val910TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2698_2699delGT
  hgvsp: ENSP00000437341.1:p.Val900TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.201_202delGT
  hgvsp: ENSP00000462031.1:p.Val68TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2647_2648delGT
  hgvsp: ENSP00000394826.1:p.Val883TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2647_2648delGT
  hgvsp: ENSP00000314736.5:p.Val883TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1135_1136delGT
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2647_2648delGT
  hgvsp: ENSP00000398544.2:p.Val883TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1895_*1896delGT
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2647_2648delGT
  hgvsp: ENSP00000377197.2:p.Val883TyrfsTer5
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26470
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val883TyrfsTer5
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: AAC
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

16-71065704-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065704
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065704
    reference: chr 16
allele count: 1
allele frequency: 1.78132459296733e-5
allele num: 56138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2727T>C
  hgvsp: ENST00000538248.1:c.2727T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.200T>C
  hgvsp: ENST00000538568.1:c.200T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1894T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1500T>C
  hgvsp: ENST00000393552.2:c.1500T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2697T>C
  hgvsp: ENST00000541601.1:c.2697T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2646T>C
  hgvsp: ENST00000448691.1:c.2646T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2646T>C
  hgvsp: ENST00000321489.5:c.2646T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2646T>C
  hgvsp: ENST00000393567.2:c.2646T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2646T>C
  hgvsp: ENST00000448089.2:c.2646T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*619T>C
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1134T>C
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys882Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

16-71065710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065710
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065710
    reference: chr 16
allele count: 1
allele frequency: 1.767034209782301e-5
allele num: 56592
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2640G>A
  hgvsp: ENST00000393567.2:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2640G>A
  hgvsp: ENST00000448089.2:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.194G>A
  hgvsp: ENST00000538568.1:c.194G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2640G>A
  hgvsp: ENST00000321489.5:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2691G>A
  hgvsp: ENST00000541601.1:c.2691G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2721G>A
  hgvsp: ENST00000538248.1:c.2721G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1128G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*613G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2640G>A
  hgvsp: ENST00000448691.1:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1888G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1494G>A
  hgvsp: ENST00000393552.2:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17598
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys880Lys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

16-71065717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065717
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065717
    reference: chr 16
allele count: 2
allele frequency: 3.485413544317033e-5
allele num: 57382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1121C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2714C>T
  hgvsp: ENSP00000444970.1:p.Thr905Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1881C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2633C>T
  hgvsp: ENSP00000314736.5:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2633C>T
  hgvsp: ENSP00000398544.2:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.187C>T
  hgvsp: ENSP00000462031.1:p.Thr63Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1487C>T
  hgvsp: ENSP00000463767.1:p.Thr496Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2633C>T
  hgvsp: ENSP00000394826.1:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2633C>T
  hgvsp: ENSP00000377197.2:p.Thr878Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2684C>T
  hgvsp: ENSP00000437341.1:p.Thr895Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*606C>T
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17355
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr878Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

16-71065718-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065718
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065718
    reference: chr 16
allele count: 147
allele frequency: 2.542109085878325e-3
allele num: 57826
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2632A>T
  hgvsp: ENSP00000377197.2:p.Thr878Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2632A>T
  hgvsp: ENSP00000314736.5:p.Thr878Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1880A>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.186A>T
  hgvsp: ENSP00000462031.1:p.Thr63Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1486A>T
  hgvsp: ENSP00000463767.1:p.Thr496Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2632A>T
  hgvsp: ENSP00000398544.2:p.Thr878Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1120A>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2713A>T
  hgvsp: ENSP00000444970.1:p.Thr905Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2632A>T
  hgvsp: ENSP00000394826.1:p.Thr878Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*605A>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2683A>T
  hgvsp: ENSP00000437341.1:p.Thr895Ser
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 1.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17362
  bin: 1.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26461
  bin: 7.5e0
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Thr878Ser
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

15-23316082-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316082
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316082
    reference: chr 15
allele count: 1
allele frequency: 1.167760468972604e-5
allele num: 85634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2802A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1160A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2858A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23873
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

15-23316090-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316090
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316090
    reference: chr 15
allele count: 3
allele frequency: 4.904044201785072e-5
allele num: 61174
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2850A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2794A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1152A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27608
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8630
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11151
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

15-23316095-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316095
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316095
    reference: chr 15
allele count: 1
allele frequency: 1.84481422720732e-5
allele num: 54206
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2845A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2789A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1147A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15650
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10315
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

16-71065739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065739
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065739
    reference: chr 16
allele count: 37
allele frequency: 6.09213949352916e-4
allele num: 60734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2611G>A
  hgvsp: ENSP00000398544.2:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2692G>A
  hgvsp: ENSP00000444970.1:p.Ala898Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2662G>A
  hgvsp: ENSP00000437341.1:p.Ala888Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1099G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2611G>A
  hgvsp: ENSP00000394826.1:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1859G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2611G>A
  hgvsp: ENSP00000377197.2:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2611G>A
  hgvsp: ENSP00000314736.5:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1465G>A
  hgvsp: ENSP00000463767.1:p.Ala489Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*584G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.165G>A
  hgvsp: ENSP00000462031.1:p.Ala56Thr
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25094
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16490
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala871Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

16-71065740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065740
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065740
    reference: chr 16
allele count: 112
allele frequency: 1.807851239669422e-3
allele num: 61952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2610C>T
  hgvsp: ENST00000448089.2:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2691C>T
  hgvsp: ENST00000538248.1:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.164C>T
  hgvsp: ENST00000538568.1:c.164C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2610C>T
  hgvsp: ENST00000393567.2:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2610C>T
  hgvsp: ENST00000448691.1:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2661C>T
  hgvsp: ENST00000541601.1:c.2661C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1098C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1464C>T
  hgvsp: ENST00000393552.2:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2610C>T
  hgvsp: ENST00000321489.5:c.2610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*583C>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1858C>T
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16323
  bin: 1.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24873
  bin: 7.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr870Thr
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-71065740-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065740
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065740
    reference: chr 16
allele count: 2
allele frequency: 3.228305785123967e-5
allele num: 61952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.164C>A
  hgvsp: ENST00000538568.1:c.164C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2610C>A
  hgvsp: ENST00000448089.2:c.2610C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2610C>A
  hgvsp: ENST00000393567.2:c.2610C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*583C>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1098C>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2610C>A
  hgvsp: ENST00000448691.1:c.2610C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2691C>A
  hgvsp: ENST00000538248.1:c.2691C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1464C>A
  hgvsp: ENST00000393552.2:c.1464C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2610C>A
  hgvsp: ENST00000321489.5:c.2610C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1858C>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2661C>A
  hgvsp: ENST00000541601.1:c.2661C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16323
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr870Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

16-71065748-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065748
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065748
    reference: chr 16
allele count: 77
allele frequency: 1.193132515185323e-3
allele num: 64536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.156G>A
  hgvsp: ENSP00000462031.1:p.Ala53Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2653G>A
  hgvsp: ENSP00000437341.1:p.Ala885Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2602G>A
  hgvsp: ENSP00000398544.2:p.Ala868Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1456G>A
  hgvsp: ENSP00000463767.1:p.Ala486Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1850G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2602G>A
  hgvsp: ENSP00000314736.5:p.Ala868Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2602G>A
  hgvsp: ENSP00000377197.2:p.Ala868Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2683G>A
  hgvsp: ENSP00000444970.1:p.Ala895Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2602G>A
  hgvsp: ENSP00000394826.1:p.Ala868Thr
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1090G>A
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*575G>A
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 23784
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15776
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala868Thr
num of homozygotes: 1
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/16-71065776-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065776
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065776
    reference: chr 16
allele count: 1
allele frequency: 1.363809939446839e-5
allele num: 73324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2625G>T
  hgvsp: ENSP00000437341.1:p.Met875Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.128G>T
  hgvsp: ENSP00000462031.1:p.Met43Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2574G>T
  hgvsp: ENSP00000398544.2:p.Met858Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*547G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2574G>T
  hgvsp: ENSP00000394826.1:p.Met858Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2655G>T
  hgvsp: ENSP00000444970.1:p.Met885Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2574G>T
  hgvsp: ENSP00000377197.2:p.Met858Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2574G>T
  hgvsp: ENSP00000314736.5:p.Met858Ile
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1062G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1822G>T
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1428G>T
  hgvsp: ENSP00000463767.1:p.Met476Ile
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met858Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS

16-71065783-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065783
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065783
    reference: chr 16
allele count: 3
allele frequency: 3.961128129291222e-5
allele num: 75736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.121A>G
  hgvsp: ENSP00000462031.1:p.Glu41Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2567A>G
  hgvsp: ENSP00000377197.2:p.Glu856Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1421A>G
  hgvsp: ENSP00000463767.1:p.Glu474Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2567A>G
  hgvsp: ENSP00000314736.5:p.Glu856Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2567A>G
  hgvsp: ENSP00000394826.1:p.Glu856Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1815A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2648A>G
  hgvsp: ENSP00000444970.1:p.Glu883Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2618A>G
  hgvsp: ENSP00000437341.1:p.Glu873Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2567A>G
  hgvsp: ENSP00000398544.2:p.Glu856Gly
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*540A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1055A>G
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15440
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu856Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-71065786-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71065786
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71065786
    reference: chr 16
allele count: 8
allele frequency: 1.043024771838331e-4
allele num: 76700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463422
  ensembl transcript: ENST00000545230
  gene symbol: HYDIN
  hgvsc: ENST00000545230.1:c.*537A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157423
  ensembl transcript: ENST00000540892
  gene symbol: HYDIN
  hgvsc: ENST00000540892.1:n.1052A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000437341
  ensembl transcript: ENST00000541601
  gene symbol: HYDIN
  hgvsc: ENST00000541601.1:c.2615A>G
  hgvsp: ENSP00000437341.1:p.Asn872Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000398544
  ensembl transcript: ENST00000448089
  gene symbol: HYDIN
  hgvsc: ENST00000448089.2:c.2564A>G
  hgvsp: ENSP00000398544.2:p.Asn855Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000462031
  ensembl transcript: ENST00000538568
  gene symbol: HYDIN
  hgvsc: ENST00000538568.1:c.118A>G
  hgvsp: ENSP00000462031.1:p.Asn40Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463767
  ensembl transcript: ENST00000393552
  gene symbol: HYDIN
  hgvsc: ENST00000393552.2:c.1418A>G
  hgvsp: ENSP00000463767.1:p.Asn473Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000394826
  ensembl transcript: ENST00000448691
  gene symbol: HYDIN
  hgvsc: ENST00000448691.1:c.2564A>G
  hgvsp: ENSP00000394826.1:p.Asn855Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000314736
  ensembl transcript: ENST00000321489
  gene symbol: HYDIN
  hgvsc: ENST00000321489.5:c.2564A>G
  hgvsp: ENSP00000314736.5:p.Asn855Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000444970
  ensembl transcript: ENST00000538248
  gene symbol: HYDIN
  hgvsc: ENST00000538248.1:c.2645A>G
  hgvsp: ENSP00000444970.1:p.Asn882Ser
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000463093
  ensembl transcript: ENST00000539447
  gene symbol: HYDIN
  hgvsc: ENST00000539447.1:c.*1812A>G
  variant of: http://identifiers.org/hgnc/19368
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157423
  ensembl protein: ENSP00000377197
  ensembl transcript: ENST00000393567
  gene symbol: HYDIN
  hgvsc: ENST00000393567.2:c.2564A>G
  hgvsp: ENSP00000377197.2:p.Asn855Ser
  variant of: http://identifiers.org/hgnc/19368
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16968
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn855Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

15-23316099-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316099
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316099
    reference: chr 15
allele count: 1
allele frequency: 1.992587574223887e-5
allele num: 50186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1143C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2841C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2785C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15965
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28722
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12074
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-23316099-GCAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316099
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316095
    reference: chr 15
allele count: 7
allele frequency: 1.394811301956721e-4
allele num: 50186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2781_2784delTCTG
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2837_2840delTCTG
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1139_1142delTCTG
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15965
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16208
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12074
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28722
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: GCAGA
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

15-23316106-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316106
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316106
    reference: chr 15
allele count: 1
allele frequency: 2.449179524859172e-5
allele num: 40830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2778C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1136C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2834C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15952
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-23316108-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316108
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316106
    reference: chr 15
allele count: 5
allele frequency: 1.309997904003353e-4
allele num: 38168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1132_1133delTT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2830_2831delTT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2774_2775delTT
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14745
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17004
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: CAA
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

15-23316116-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316116
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316116
    reference: chr 15
allele count: 1
allele frequency: 3.419037199124726e-5
allele num: 29248
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2824G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2768G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1126G>C
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12134
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23685
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

15-23316125-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316125
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316125
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 18602
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1117C>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2759C>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2815C>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14317
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16705
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

15-23316130-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316130
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316130
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 11588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1112A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2810A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2754A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28987
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28617
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS

15-23316135-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316135
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316135
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 7526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1107G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2749G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2805G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12534
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28667
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

15-23316145-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316145
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316145
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 4160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2739A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1097A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2795A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31982
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28605
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

15-23316156-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316156
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316156
    reference: chr 15
allele count: 8
allele frequency: 2.12879191059074e-3
allele num: 3758
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2784C>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1086C>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2728C>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32292
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9738
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30646
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-23316164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316164
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316164
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 3584
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2776C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2720C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1078C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32359
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9485
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

15-23316181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316181
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316181
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 3022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1061G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2703G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2759G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10036
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30742
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

15-23316182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316182
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316182
    reference: chr 15
allele count: 14
allele frequency: 4.669779853235491e-3
allele num: 2998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2702C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1060C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2758C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32469
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9884
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 30708
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

15-23316188-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316189
    reference: chr 15
allele count: 2
allele frequency: 7.987220447284345e-4
allele num: 2504
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2754-3dupT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2698-3dupT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1056-3dupT
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9513
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 32146
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 29808
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3938
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6613
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 4
hgvs: n.2754-3dupT
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

15-23316188-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316187
    reference: chr 15
allele count: 1
allele frequency: 3.993610223642172e-4
allele num: 2504
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2754-3delT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1056-3delT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2698-3delT
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9513
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29808
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3938
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: n.2754-3delT
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: TA
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

15-23316221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23316221
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23316221
    reference: chr 15
allele count: 1
allele frequency: 5.36480686695279e-4
allele num: 1864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.1056-35C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2698-35C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2754-35C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

15-23317042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23317042
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23317042
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2603G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.905G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2547G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

15-23317085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23317085
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23317085
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2561-1G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2505-1G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.863-1G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
hgvs: n.2561-1G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

15-23318494-CTAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318494
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318491
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 2112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.862+27_862+29delTTA
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2504+27_2504+29delTTA
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2560+27_2560+29delTTA
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8551
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27880
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CTAA
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

15-23318498-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318498
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318498
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 2238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2504+26A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2560+26A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.862+26A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34114
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7508
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29085
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-23318509-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318509
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318508
    reference: chr 15
allele count: 4
allele frequency: 1.406469760900141e-3
allele num: 2844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.862+14delT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2560+14delT
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2504+14delT
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32053
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13625
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29092
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 11307
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: CA
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

15-23318530-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318530
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318530
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 5900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2498C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2554C>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.856C>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22161
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24007
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

15-23318547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318547
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318547
    reference: chr 15
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2481G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2537G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.839G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23910
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19760
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

15-23318549-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318549
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318549
    reference: chr 15
allele count: 1
allele frequency: 9.225092250922509e-5
allele num: 10840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.837G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2479G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2535G>C
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-23318551-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318551
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318551
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 11450
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2533A>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2477A>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.835A>C
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19805
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19038
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP

15-23318560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318560
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318560
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 14012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.826G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2468G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2524G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27650
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25043
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17462
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

15-23318578-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318578
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318578
    reference: chr 15
allele count: 1
allele frequency: 5.332195798229711e-5
allele num: 18754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.808G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2506G>C
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2450G>C
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2883
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-23318580-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318580
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318580
    reference: chr 15
allele count: 2
allele frequency: 1.029018316526034e-4
allele num: 19436
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2504A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.806A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2448A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14709
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

15-23318591-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318591
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318591
    reference: chr 15
allele count: 1
allele frequency: 4.215851602023609e-5
allele num: 23720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2437A>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.795A>T
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2493A>T
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1787
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 12930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3467
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

15-23318593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318593
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318593
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 27570
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.793A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2491A>G
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2435A>G
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28429
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11633
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6308
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-23318598-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23318598
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 23318598
    reference: chr 15
allele count: 1
allele frequency: 2.362279126901635e-5
allele num: 42332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000454333
  gene symbol: HERC2P2
  hgvsc: ENST00000454333.2:n.788G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000559650
  gene symbol: HERC2P2
  hgvsc: ENST00000559650.1:n.2430G>A
  variant of: http://identifiers.org/hgnc/4870
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140181
  ensembl transcript: ENST00000560464
  gene symbol: HERC2P2
  hgvsc: ENST00000560464.1:n.2486G>A
  variant of: http://identifiers.org/hgnc/4870
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26680
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2891
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 402
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43658
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552072016141549e-5
allele num: 64430
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.533e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.83e-1

MQ
type: SiteQuality
SIO_000300: 3.282e1

FS
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
SIO_000300: 1.634766e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.320000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.58e-1

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 2810
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7642
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1508
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 44708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.238696890870804e-4
allele num: 64584
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.785795068988917e-4
allele num: 8842
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 7.020499859590003e-5
allele num: 14244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.755001755001755e-4
allele num: 11396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

DP
type: SiteQuality
SIO_000300: 1.656907e6

VQSLOD
type: SiteQuality
SIO_000300: -7.269e1

QD
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 2.9e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.057e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

FS
type: SiteQuality
SIO_000300: 1.32973e2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
all individuals: 44580
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.095400235250418e-5
allele num: 64612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.866e0

MQ
type: SiteQuality
SIO_000300: 3.132e1

MQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

DP
type: SiteQuality
SIO_000300: 1.650453e6

GenotypeDepth
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43209
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172607879924953e-4
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.769e0

VQSLOD
type: SiteQuality
SIO_000300: -4.27e0

QD
type: SiteQuality
SIO_000300: 8.5e0

FS
type: SiteQuality
SIO_000300: 2.063e0

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 1.637343e6

MQ
type: SiteQuality
SIO_000300: 3.05e1

GenotypeDepth
all individuals: 11
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 7453
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6288
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40676
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
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variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.641775272983445e-4
allele num: 11356
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13836
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.705e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 6.06e-1

MQ
type: SiteQuality
SIO_000300: 3.243e1

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

DP
type: SiteQuality
SIO_000300: 1.60901e6

QD
type: SiteQuality
SIO_000300: 1.59e1

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 7438
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variant carriers: 0

GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
all individuals: 654
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variant carriers: 0

GenotypeQuality
all individuals: 6475
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40487
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571684531480841e-5
allele num: 63626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
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SIO_000300: -3.471e0

MQ
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SIO_000300: 3.158e1

ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.8e-3

MQRankSum
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DP
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FS
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SIO_000300: 7.663e0

QD
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SIO_000300: 6.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 1.177024482109228e-4
allele num: 8496
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -4.679e0

BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.2e-3

MQ
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 7.338910905621606e-5
allele num: 13626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62924
num of homozygotes: 0

Other
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.3e-3

MQRankSum
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SIO_000300: -1.99e-1

VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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SIO_000300: 2.511e1

BaseQRankSum
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SIO_000300: -2.148e0

QD
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SIO_000300: 6.09e0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Other
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allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.815718505200976e-5
allele num: 62296
num of homozygotes: 0

QD
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SIO_000300: 8.630000000000001e0

ClippingRankSum
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SIO_000300: -6.860000000000001e-1

FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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SIO_000300: 1.568237e6

BaseQRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.605239501733659e-5
allele num: 62296
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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Other
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DP
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 13430
num of homozygotes: 0

African
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allele num: 7940
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Latino
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allele num: 11258
num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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DP
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.882572392965002e-5
allele num: 11258
num of homozygotes: 0

African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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European (Non-Finnish)
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Latino
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South Asian
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African
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Other
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East Asian
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MQ
type: SiteQuality
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QD
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VQSLOD
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FS
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InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.554176e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 4.30786904078116e-4
allele num: 6964
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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MQRankSum
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MQ
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FS
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DP
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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Latino
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East Asian
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allele frequency: 1.342281879194631e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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VQSLOD
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DP
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 5006
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Other
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 2.317819395512702e-5
allele num: 43144
num of homozygotes: 0

MQ
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SIO_000300: 2.655e1

InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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DP
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QD
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VQSLOD
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SIO_000300: -5.275e0

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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BaseQRankSum
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SIO_000300: 1.95e0

MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 2.123142250530786e-4
allele num: 4710
num of homozygotes: 0

European (Finnish)
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allele count: 0
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Latino
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Other
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East Asian
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African
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European (Non-Finnish)
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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InbreedingCoeff
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FS
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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QD
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 32880
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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Other
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East Asian
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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African
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

East Asian
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 2.239140170174653e-4
allele num: 4466
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Latino
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Latino
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South Asian
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African
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Other
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European (Finnish)
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MQ
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4444
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.546072974644403e-4
allele num: 6468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.29e-2

MQ
type: SiteQuality
SIO_000300: 2.2e1

FS
type: SiteQuality
SIO_000300: 9.249000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 6.66252e5

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.411e0

QD
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

GenotypeDepth
all individuals: 11
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.105782967886204e-5
allele num: 32198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4258
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 1.8543e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.319000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 2.338e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.157e0

DP
type: SiteQuality
SIO_000300: 6.75303e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 564
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variant carriers: 2

GenotypeQuality
all individuals: 5047
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.114711997064938e-5
allele num: 32708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4344
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
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SIO_000300: -7.607e0

QD
type: SiteQuality
SIO_000300: 5.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e0

DP
type: SiteQuality
SIO_000300: 6.85725e5

BaseQRankSum
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SIO_000300: -2.742e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.306e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

GenotypeDepth
all individuals: 13
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variant carriers: 0

GenotypeDepth
all individuals: 12
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variant carriers: 1

GenotypeQuality
all individuals: 1966
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variant carriers: 2

GenotypeQuality
all individuals: 5040
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 107
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 100

GenotypeQuality
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variant carriers: 8

GenotypeQuality
all individuals: 184
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variant carriers: 7

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.046365685736916e-5
allele num: 32826
num of homozygotes: 0

African
type: Population
allele count: 140
allele frequency: 3.087781208645787e-2
allele num: 4534
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4690
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 9.168704156479218e-4
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4278
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

FS
type: SiteQuality
SIO_000300: 7.3185e1

DP
type: SiteQuality
SIO_000300: 6.88232e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQ
type: SiteQuality
SIO_000300: 2.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.085e1

QD
type: SiteQuality
SIO_000300: 6.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 21
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47636
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.271617497456765e-4
allele num: 7864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.852e0

DP
type: SiteQuality
SIO_000300: 1.026396e6

MQ
type: SiteQuality
SIO_000300: 2.785e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 3.266e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

QD
type: SiteQuality
SIO_000300: 4.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQRankSum
type: SiteQuality
SIO_000300: 2.83e0

GenotypeQuality
all individuals: 783
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.844961240310077e-4
allele num: 6192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 3888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 6.96393e5

InbreedingCoeff
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SIO_000300: -1.87e-2

MQRankSum
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QD
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VQSLOD
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SIO_000300: -4.27e0

ReadPosRankSum
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SIO_000300: -2.34e-1

FS
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 3.201e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30522
num of homozygotes: 0

South Asian
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allele count: 0
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African
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allele count: 1
allele frequency: 2.997601918465228e-4
allele num: 3336
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Other
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allele frequency: 0.0e0
allele num: 320
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6780
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

VQSLOD
type: SiteQuality
SIO_000300: -4.635e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.20814e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.27e-2

MQ
type: SiteQuality
SIO_000300: 3.039e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.027e0

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4730
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.092050209205021e-3
allele num: 478
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 1.029714621947632e-3
allele num: 6798
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4714
num of homozygotes: 0

European (Non-Finnish)
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allele count: 29
allele frequency: 8.382956582066255e-4
allele num: 34594
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.484e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.661e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 7.30849e5

QD
type: SiteQuality
SIO_000300: 8.43e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 15

GenotypeQuality
all individuals: 646
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variant carriers: 72

GenotypeQuality
all individuals: 2312
bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 4821
bin: 2.75e1
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GenotypeQuality
all individuals: 7312
bin: 6.25e1
variant carriers: 3

African
type: Population
allele count: 3
allele frequency: 5.76923076923077e-4
allele num: 5200
num of homozygotes: 0

South Asian
type: Population
allele count: 83
allele frequency: 1.680842446334548e-2
allele num: 4938
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 1
allele frequency: 2.11864406779661e-3
allele num: 472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 18
allele frequency: 5.108411851515495e-4
allele num: 35236
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.012731481481481e-3
allele num: 6912
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 2.2e1

ReadPosRankSum
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SIO_000300: 3.87e-1

BaseQRankSum
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SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

DP
type: SiteQuality
SIO_000300: 7.40975e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 4.203446826397646e-4
allele num: 4758
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 35236
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 1.77e0

DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.594536304816679e-4
allele num: 5564
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 4
allele frequency: 8.802816901408451e-4
allele num: 4544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 71
allele frequency: 1.927880960139025e-3
allele num: 36828
num of homozygotes: 1

Latino
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allele frequency: 0.0e0
allele num: 7220
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.359e0

DP
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SIO_000300: 7.63383e5

MQ
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SIO_000300: 2.2e1

InbreedingCoeff
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FS
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SIO_000300: 1.435e0

MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

QD
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SIO_000300: 9.34e0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1479
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4882
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.768659356207994e-4
allele num: 5654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
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South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
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SIO_000300: -5.289e0

MQRankSum
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SIO_000300: -5.02e-1

InbreedingCoeff
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SIO_000300: -8.3e-3

BaseQRankSum
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SIO_000300: -1.73e-1

DP
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SIO_000300: 8.49257e5

MQ
type: SiteQuality
SIO_000300: 2.669e1

QD
type: SiteQuality
SIO_000300: 4.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.819e0

FS
type: SiteQuality
SIO_000300: 4.125e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 574
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.469291801351749e-4
allele num: 6806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.574983987556043e-5
allele num: 43716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.36e1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.67767e5

VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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SIO_000300: 9.53e-1

ClippingRankSum
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SIO_000300: 6.02e-1

InbreedingCoeff
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SIO_000300: -7.1e-3

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 6.662225183211193e-4
allele num: 6004
num of homozygotes: 0

South Asian
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African
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allele frequency: 5.780346820809249e-4
allele num: 6920
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 44276
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.6816e1

QD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

Other
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Latino
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East Asian
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European (Finnish)
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South Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.545596369309318e-5
allele num: 28204
num of homozygotes: 0

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
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FS
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 4.074979625101874e-4
allele num: 2454
num of homozygotes: 0

European (Non-Finnish)
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Other
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Latino
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allele frequency: 4.048582995951417e-4
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African
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allele num: 3042
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South Asian
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East Asian
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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South Asian
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Latino
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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South Asian
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African
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 6.305170239596469e-5
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European (Finnish)
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BaseQRankSum
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MQRankSum
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FS
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DP
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MQ
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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FS
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QD
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeQuality
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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South Asian
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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QD
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FS
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GenotypeQuality
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bin: 7.25e1
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East Asian
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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QD
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VQSLOD
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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bin: 1.25e1
variant carriers: 5

African
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 1.234567901234568e-2
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European (Non-Finnish)
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allele frequency: 2.941176470588235e-3
allele num: 1700
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European (Finnish)
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allele frequency: 4.854368932038835e-3
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East Asian
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South Asian
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FS
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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Latino
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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QD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Non-Finnish)
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South Asian
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Latino
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African
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European (Finnish)
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Other
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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African
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European (Finnish)
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Other
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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ClippingRankSum
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FS
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MQRankSum
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DP
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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South Asian
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Latino
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African
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European (Non-Finnish)
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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DP
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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East Asian
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African
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South Asian
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QD
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DP
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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African
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InbreedingCoeff
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VQSLOD
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DP
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QD
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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BaseQRankSum
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ClippingRankSum
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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FS
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MQ
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VQSLOD
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QD
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East Asian
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European (Finnish)
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VQSLOD
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DP
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South Asian
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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DP
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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MQ
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InbreedingCoeff
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QD
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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Other
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East Asian
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Latino
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African
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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FS
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DP
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GenotypeQuality
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East Asian
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South Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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DP
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MQRankSum
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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VQSLOD
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QD
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MQ
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DP
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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East Asian
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VQSLOD
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DP
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MQ
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GenotypeQuality
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African
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VQSLOD
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InbreedingCoeff
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FS
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DP
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MQRankSum
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MQ
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GenotypeQuality
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DP
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MQ
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