14-58875902-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58875902
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58875902
    reference: chr 14
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.136-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.215-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.136-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.136-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.510-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+10254G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.136-85C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.136-16C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.371-103C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.343-100C>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24589
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-58875905-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58875905
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58875905
    reference: chr 14
allele count: 1
allele frequency: 8.30675172780436e-6
allele num: 120384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.510-19C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.136-19C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.136-19C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.215-19C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.136-88C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+10257G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.371-106C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.343-103C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.136-19C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.136-19C>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24370
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-58875908-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58875908
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58875908
    reference: chr 14
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.136-91G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.136-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.215-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.136-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+10260C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.136-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.510-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.343-106G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.136-22G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.371-109G>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

14-58875938-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58875938
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58875938
    reference: chr 14
allele count: 1
allele frequency: 8.48147645542136e-6
allele num: 117904
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.136-52A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.510-52A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+10290T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.136-52A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.136-121A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.343-136A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.136-52A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.371-139A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.215-52A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.136-52A>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16160
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

14-58877521-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877521
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877521
    reference: chr 14
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11873T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+40A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+40A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34213
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

14-58877525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877525
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877525
    reference: chr 14
allele count: 2
allele frequency: 1.676361624729687e-5
allele num: 119306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+36C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11877G>A
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2692
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

14-58877531-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877531
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877531
    reference: chr 14
allele count: 11
allele frequency: 9.210416143347568e-5
allele num: 119430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11883T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+30A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+30A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

14-58877531-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877531
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877531
    reference: chr 14
allele count: 1
allele frequency: 8.373105584861425e-6
allele num: 119430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+30A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11883T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+30A>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

14-58877535-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877535
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877534
    reference: chr 14
allele count: 1
allele frequency: 8.360784576024614e-6
allele num: 119606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11891delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+25delA
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+25delA
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: AT
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

14-58877538-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877538
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877538
    reference: chr 14
allele count: 2
allele frequency: 1.670564650851988e-5
allele num: 119720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11890T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+23A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+23A>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34207
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8791
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-58877539-TAGTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877539
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877535
    reference: chr 14
allele count: 1
allele frequency: 8.349893956346754e-6
allele num: 119762
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11895_374+11898delGAGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+18_342+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+18_135+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+18_135+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+18_135+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+18_135+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+18_214+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+18_135+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+18_370+21delCACT
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+18_509+21delCACT
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: TAGTG
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

14-58877550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877550
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877550
    reference: chr 14
allele count: 29
allele frequency: 2.410199298548894e-4
allele num: 120322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11902A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+11T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+11T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-58877551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877551
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877551
    reference: chr 14
allele count: 2
allele frequency: 1.66220641279234e-5
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+10G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11903C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+10G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

14-58877557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877557
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877557
    reference: chr 14
allele count: 3
allele frequency: 2.487067250298448e-5
allele num: 120624
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.135+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.135+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.135+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.509+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.214+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.135+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11909A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.342+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.135+4T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.370+4T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1492
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
hgvs: c.135+4T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-58877567-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877567
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877567
    reference: chr 14
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.336T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.129T>G
  hgvsp: ENST00000555404.1:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11919A>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.129T>G
  hgvsp: ENST00000556007.2:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.129T>G
  hgvsp: ENST00000555061.1:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.129T>G
  hgvsp: ENST00000395159.2:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.129T>G
  hgvsp: ENST00000555097.1:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.129T>G
  hgvsp: ENST00000555593.1:c.129T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.364T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.208T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.503T>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro43Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-58877578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877578
    reference: chr 14
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.325G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.118G>A
  hgvsp: ENSP00000378588.2:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.118G>A
  hgvsp: ENSP00000451006.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.118G>A
  hgvsp: ENSP00000451198.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.118G>A
  hgvsp: ENSP00000450638.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.492G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.118G>A
  hgvsp: ENSP00000452091.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.118G>A
  hgvsp: ENSP00000450624.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11930C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.353G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.197G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu40Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-58877579-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877579
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877579
    reference: chr 14
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.117A>C
  hgvsp: ENSP00000450638.1:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.117A>C
  hgvsp: ENSP00000450624.1:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.117A>C
  hgvsp: ENSP00000378588.2:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.117A>C
  hgvsp: ENSP00000451198.1:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.196A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.324A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.352A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.117A>C
  hgvsp: ENSP00000451006.1:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.491A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.117A>C
  hgvsp: ENSP00000452091.1:p.Arg39Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11931T>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg39Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

14-58877580-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877580
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877580
    reference: chr 14
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.116G>C
  hgvsp: ENSP00000378588.2:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.116G>C
  hgvsp: ENSP00000451198.1:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.323G>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.116G>C
  hgvsp: ENSP00000450624.1:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.116G>C
  hgvsp: ENSP00000451006.1:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.116G>C
  hgvsp: ENSP00000452091.1:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.490G>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11932C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.116G>C
  hgvsp: ENSP00000450638.1:p.Arg39Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.195G>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.351G>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg39Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-58877583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877583
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877583
    reference: chr 14
allele count: 46
allele frequency: 3.793063641011264e-4
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.192C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11935G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.113C>T
  hgvsp: ENSP00000451006.1:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.320C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.113C>T
  hgvsp: ENSP00000378588.2:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.113C>T
  hgvsp: ENSP00000452091.1:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.487C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.113C>T
  hgvsp: ENSP00000450638.1:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.348C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.113C>T
  hgvsp: ENSP00000451198.1:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.113C>T
  hgvsp: ENSP00000450624.1:p.Thr38Ile
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 9.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr38Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

14-58877584-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877584
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877584
    reference: chr 14
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.112A>T
  hgvsp: ENSP00000451006.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.112A>T
  hgvsp: ENSP00000450638.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.112A>T
  hgvsp: ENSP00000452091.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.486A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.112A>T
  hgvsp: ENSP00000451198.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.112A>T
  hgvsp: ENSP00000378588.2:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.112A>T
  hgvsp: ENSP00000450624.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.347A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.319A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.191A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11936T>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr38Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

14-58877588-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877588
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877588
    reference: chr 14
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.108C>A
  hgvsp: ENSP00000451198.1:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.315C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.343C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.108C>A
  hgvsp: ENSP00000451006.1:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.108C>A
  hgvsp: ENSP00000378588.2:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.482C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11940G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.108C>A
  hgvsp: ENSP00000450638.1:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.108C>A
  hgvsp: ENSP00000450624.1:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.187C>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.108C>A
  hgvsp: ENSP00000452091.1:p.Phe36Leu
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe36Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

14-58877593-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877593
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877593
    reference: chr 14
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.103G>A
  hgvsp: ENSP00000451198.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.103G>A
  hgvsp: ENSP00000450624.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.103G>A
  hgvsp: ENSP00000451006.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.310G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.103G>A
  hgvsp: ENSP00000452091.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.338G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.103G>A
  hgvsp: ENSP00000378588.2:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.477G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.182G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.103G>A
  hgvsp: ENSP00000450638.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11945C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp35Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

14-58877616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877616
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877616
    reference: chr 14
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.80C>T
  hgvsp: ENSP00000378588.2:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.287C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.80C>T
  hgvsp: ENSP00000451198.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.454C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.80C>T
  hgvsp: ENSP00000450624.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.80C>T
  hgvsp: ENSP00000450638.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.159C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.80C>T
  hgvsp: ENSP00000451006.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.315C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.80C>T
  hgvsp: ENSP00000452091.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11968G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr27Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

14-58877621-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877621
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877621
    reference: chr 14
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.75A>G
  hgvsp: ENST00000395159.2:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.75A>G
  hgvsp: ENST00000555593.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.75A>G
  hgvsp: ENST00000555097.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.310A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.75A>G
  hgvsp: ENST00000555404.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.75A>G
  hgvsp: ENST00000556007.2:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.449A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.75A>G
  hgvsp: ENST00000555061.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11973T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.282A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.154A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr25Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

14-58877622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877622
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877622
    reference: chr 14
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.74C>T
  hgvsp: ENSP00000450638.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11974G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.74C>T
  hgvsp: ENSP00000450624.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.74C>T
  hgvsp: ENSP00000451198.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.153C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.448C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.309C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.74C>T
  hgvsp: ENSP00000451006.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.74C>T
  hgvsp: ENSP00000378588.2:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.74C>T
  hgvsp: ENSP00000452091.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.281C>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr25Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

14-58877626-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877626
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877626
    reference: chr 14
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.70C>T
  hgvsp: ENSP00000451198.1:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.70C>T
  hgvsp: ENSP00000450624.1:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.149C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.277C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.444C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.305C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.70C>T
  hgvsp: ENSP00000450638.1:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11978G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.70C>T
  hgvsp: ENSP00000452091.1:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.70C>T
  hgvsp: ENSP00000378588.2:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.70C>T
  hgvsp: ENSP00000451006.1:p.Leu24Phe
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu24Phe
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

14-58877631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877631
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877631
    reference: chr 14
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.65A>G
  hgvsp: ENSP00000451006.1:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.300A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.65A>G
  hgvsp: ENSP00000451198.1:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.272A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.144A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.65A>G
  hgvsp: ENSP00000450638.1:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.65A>G
  hgvsp: ENSP00000378588.2:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.439A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.65A>G
  hgvsp: ENSP00000452091.1:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.65A>G
  hgvsp: ENSP00000450624.1:p.Asn22Ser
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11983T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn22Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

14-58877637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877637
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877637
    reference: chr 14
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.59C>T
  hgvsp: ENSP00000378588.2:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11989G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.266C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.59C>T
  hgvsp: ENSP00000450638.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.294C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.59C>T
  hgvsp: ENSP00000450624.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.59C>T
  hgvsp: ENSP00000451198.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.59C>T
  hgvsp: ENSP00000451006.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.138C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.433C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.59C>T
  hgvsp: ENSP00000452091.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr20Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

14-58877639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877639
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877639
    reference: chr 14
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.431G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.292G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.57G>A
  hgvsp: ENST00000556007.2:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.57G>A
  hgvsp: ENST00000555404.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.57G>A
  hgvsp: ENST00000395159.2:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.57G>A
  hgvsp: ENST00000555061.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11991C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.136G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.264G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.57G>A
  hgvsp: ENST00000555097.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.57G>A
  hgvsp: ENST00000555593.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly19Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

14-58877642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877642
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877642
    reference: chr 14
allele count: 5
allele frequency: 4.129023733628421e-5
allele num: 121094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.54G>A
  hgvsp: ENST00000555061.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.54G>A
  hgvsp: ENST00000556007.2:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.54G>A
  hgvsp: ENST00000555097.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.261G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.133G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.54G>A
  hgvsp: ENST00000555404.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.289G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.428G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.54G>A
  hgvsp: ENST00000395159.2:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.54G>A
  hgvsp: ENST00000555593.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+11994C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu18Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

14-58877649-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877649
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877649
    reference: chr 14
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.47A>G
  hgvsp: ENSP00000450638.1:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.254A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.47A>G
  hgvsp: ENSP00000378588.2:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12001T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.282A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.47A>G
  hgvsp: ENSP00000451006.1:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.47A>G
  hgvsp: ENSP00000450624.1:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.47A>G
  hgvsp: ENSP00000451198.1:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.126A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.47A>G
  hgvsp: ENSP00000452091.1:p.Glu16Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.421A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu16Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/14-58877654-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877654
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877654
    reference: chr 14
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.42T>G
  hgvsp: ENSP00000450638.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.42T>G
  hgvsp: ENSP00000451198.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.121T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.42T>G
  hgvsp: ENSP00000450624.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.277T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12006A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.42T>G
  hgvsp: ENSP00000452091.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.416T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.42T>G
  hgvsp: ENSP00000451006.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.42T>G
  hgvsp: ENSP00000378588.2:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.249T>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe14Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

14-58877662-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877662
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877662
    reference: chr 14
allele count: 2
allele frequency: 1.657879903179814e-5
allele num: 120636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12014A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-6T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.40-6T>C
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-58877664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877664
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877664
    reference: chr 14
allele count: 1
allele frequency: 8.290086714307032e-6
allele num: 120626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12016C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-8G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-8G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.40-8G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-58877665-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877665
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877665
    reference: chr 14
allele count: 1
allele frequency: 8.29324929507381e-6
allele num: 120580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12017A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-9T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-9T>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

14-58877671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877671
    reference: chr 14
allele count: 52
allele frequency: 4.319941514637956e-4
allele num: 120372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12023G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-15C>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-15C>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6938
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5896
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-58877671-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877671
    reference: chr 14
allele count: 1
allele frequency: 8.307579835842223e-6
allele num: 120372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12023G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-15C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-15C>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

14-58877674-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877674
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877674
    reference: chr 14
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12026T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-18A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-18A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

14-58877679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877679
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877679
    reference: chr 14
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12031T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-23A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-23A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-58877681-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877681
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877681
    reference: chr 14
allele count: 2
allele frequency: 1.665639522294585e-5
allele num: 120074
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12033T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-25A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

14-58877684-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58877684
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58877684
    reference: chr 14
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12036T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.247-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.275-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.40-28A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-28A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2852
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/14-58878582-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878582
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878582
    reference: chr 14
allele count: 6
allele frequency: 4.980575754557227e-5
allele num: 120468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-926G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-926G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12934C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+43G>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+43G>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8746
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

14-58878582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878582
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878582
    reference: chr 14
allele count: 2
allele frequency: 1.660191918185742e-5
allele num: 120468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-926G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12934C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+43G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-926G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+43G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8746
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25442
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

14-58878583-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878583
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878583
    reference: chr 14
allele count: 69
allele frequency: 5.739668596526253e-4
allele num: 120216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12935A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-927T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-927T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+42T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16767
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

14-58878590-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878590
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878590
    reference: chr 14
allele count: 3
allele frequency: 2.487603442843165e-5
allele num: 120598
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-934A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-934A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+35A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12942T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+35A>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

14-58878590-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878590
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878591
    reference: chr 14
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-935dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12943dupG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+34dupC
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-935dupC
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

14-58878621-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878621
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878621
    reference: chr 14
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-965A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-965A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12973T>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+4A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+4A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.39+4A>G
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

14-58878622-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878622
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878622
    reference: chr 14
allele count: 4
allele frequency: 3.306932985003059e-5
allele num: 120958
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-966A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-966A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12974T>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.39+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.246+3A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.274+3A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18378
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.39+3A>G
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

14-58878632-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878632
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878632
    reference: chr 14
allele count: 7
allele frequency: 5.785984691937644e-5
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.32T>C
  hgvsp: ENSP00000451198.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-976T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.32T>C
  hgvsp: ENSP00000378588.2:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.32T>C
  hgvsp: ENSP00000451006.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.32T>C
  hgvsp: ENSP00000450638.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.32T>C
  hgvsp: ENSP00000452091.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.32T>C
  hgvsp: ENSP00000450624.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12984A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.267T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-976T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.239T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile11Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-58878636-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878636
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878636
    reference: chr 14
allele count: 1
allele frequency: 8.265829062654984e-6
allele num: 120980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-980C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.28C>G
  hgvsp: ENSP00000451198.1:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12988G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-980C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.28C>G
  hgvsp: ENSP00000451006.1:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.28C>G
  hgvsp: ENSP00000450638.1:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.28C>G
  hgvsp: ENSP00000452091.1:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.28C>G
  hgvsp: ENSP00000450624.1:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.28C>G
  hgvsp: ENSP00000378588.2:p.Gln10Glu
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.235C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.263C>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln10Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

14-58878643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878643
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878643
    reference: chr 14
allele count: 1
allele frequency: 8.266512358435975e-6
allele num: 120970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.21A>G
  hgvsp: ENST00000555097.1:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+12995T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.21A>G
  hgvsp: ENST00000555593.1:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.256A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.21A>G
  hgvsp: ENST00000555061.1:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.21A>G
  hgvsp: ENST00000556007.2:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.21A>G
  hgvsp: ENST00000395159.2:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-987A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.21A>G
  hgvsp: ENST00000555404.1:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.228A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-987A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu7Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

14-58878652-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878652
    reference: chr 14
allele count: 3
allele frequency: 2.480568877129155e-5
allele num: 120940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.12A>G
  hgvsp: ENST00000555404.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.12A>G
  hgvsp: ENST00000555061.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.219A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.12A>G
  hgvsp: ENST00000395159.2:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-996A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.247A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.12A>G
  hgvsp: ENST00000555097.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-996A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.12A>G
  hgvsp: ENST00000556007.2:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.12A>G
  hgvsp: ENST00000555593.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13004T>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln4Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

14-58878655-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878655
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878655
    reference: chr 14
allele count: 2
allele frequency: 1.654451301225948e-5
allele num: 120886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.244A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.9A>G
  hgvsp: ENST00000555097.1:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.9A>G
  hgvsp: ENST00000555061.1:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.216A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.9A>G
  hgvsp: ENST00000395159.2:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.9A>G
  hgvsp: ENST00000555404.1:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-999A>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13007T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.9A>G
  hgvsp: ENST00000555593.1:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.9A>G
  hgvsp: ENST00000556007.2:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-999A>G
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala3Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

14-58878656-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878656
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878656
    reference: chr 14
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.8C>G
  hgvsp: ENSP00000378588.2:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.215C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.8C>G
  hgvsp: ENSP00000450638.1:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.8C>G
  hgvsp: ENSP00000451006.1:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.243C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13008G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.8C>G
  hgvsp: ENSP00000451198.1:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.8C>G
  hgvsp: ENSP00000450624.1:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1000C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1000C>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.8C>G
  hgvsp: ENSP00000452091.1:p.Ala3Gly
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 18607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala3Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum

14-58878657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878657
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878657
    reference: chr 14
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.242G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.7G>A
  hgvsp: ENSP00000450638.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1001G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.7G>A
  hgvsp: ENSP00000452091.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13009C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.7G>A
  hgvsp: ENSP00000451198.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.7G>A
  hgvsp: ENSP00000451006.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.7G>A
  hgvsp: ENSP00000378588.2:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.7G>A
  hgvsp: ENSP00000450624.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.214G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1001G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala3Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-58878674-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878674
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878674
    reference: chr 14
allele count: 1
allele frequency: 8.30937463646486e-6
allele num: 120346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.197A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1018A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.225A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1018A>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13026T>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-11A>C
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-58878686-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878686
    reference: chr 14
allele count: 1
allele frequency: 8.346688034188035e-6
allele num: 119808
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.185A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1030A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.213A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-23A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13038T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1030A>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

14-58878687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878687
    reference: chr 14
allele count: 1
allele frequency: 8.350172848577966e-6
allele num: 119758
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13039C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1031G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.212G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1031G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.184G>A
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-24G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-58878696-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878696
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878696
    reference: chr 14
allele count: 14
allele frequency: 1.171861921183915e-4
allele num: 119468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-26-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.182-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-26-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.210-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-26-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1040A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-26-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-33A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1040A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-26-7A>T
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13048T>A
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8296
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15157
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.-26-7A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/14-58878705-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878705
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878705
    reference: chr 14
allele count: 1
allele frequency: 8.400255367763179e-6
allele num: 119044
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-26-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-42T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.210-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-26-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.182-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1049T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13057A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-26-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-26-16T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1049T>G
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-26-16T>G
  variant of: http://identifiers.org/hgnc/11819
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2975
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

14-58878708-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58878708
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58878708
    reference: chr 14
allele count: 1
allele frequency: 8.419067504083248e-6
allele num: 118778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000216463
  gene symbol: TIMM9
  hgvsc: ENST00000216463.4:n.414-1052T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258378
  ensembl transcript: ENST00000556734
  gene symbol: RP11-517O13.1
  hgvsc: ENST00000556734.1:n.374+13060A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000556367
  gene symbol: TIMM9
  hgvsc: ENST00000556367.2:n.210-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000555930
  gene symbol: TIMM9
  hgvsc: ENST00000555930.2:n.182-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450638
  ensembl transcript: ENST00000555061
  gene symbol: TIMM9
  hgvsc: ENST00000555061.1:c.-45T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451198
  ensembl transcript: ENST00000555404
  gene symbol: TIMM9
  hgvsc: ENST00000555404.1:c.-26-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl transcript: ENST00000557397
  gene symbol: TIMM9
  hgvsc: ENST00000557397.1:n.119-1052T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-26-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000450624
  ensembl transcript: ENST00000555097
  gene symbol: TIMM9
  hgvsc: ENST00000555097.1:c.-26-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000451006
  ensembl transcript: ENST00000555593
  gene symbol: TIMM9
  hgvsc: ENST00000555593.1:c.-26-19T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000452091
  ensembl transcript: ENST00000556007
  gene symbol: TIMM9
  hgvsc: ENST00000556007.2:c.-26-19T>C
  variant of: http://identifiers.org/hgnc/11819
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

14-58894297-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894297
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894297
    reference: chr 14
allele count: 2
allele frequency: 1.855287569573284e-4
allele num: 10780
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-50A>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-97A>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-491T>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-115A>T
  variant of: http://identifiers.org/hgnc/19960
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

14-58894314-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894314
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894314
    reference: chr 14
allele count: 1
allele frequency: 9.276437847866419e-5
allele num: 10780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-80A>G
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-33A>G
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-508T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-98A>G
  variant of: http://identifiers.org/hgnc/19960
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD

14-58894321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894321
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894321
    reference: chr 14
allele count: 1
allele frequency: 9.27299703264095e-5
allele num: 10784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-91C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-515G>A
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-26C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-73C>T
  variant of: http://identifiers.org/hgnc/19960
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

14-58894326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894326
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894326
    reference: chr 14
allele count: 1
allele frequency: 9.271277582050807e-5
allele num: 10786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-68A>G
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-520T>C
  variant of: http://identifiers.org/hgnc/11819
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-21A>G
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-86A>G
  variant of: http://identifiers.org/hgnc/19960
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

14-58894329-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894329
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894329
    reference: chr 14
allele count: 1
allele frequency: 9.27299703264095e-5
allele num: 10784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-65G>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-18G>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-83G>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100575
  ensembl protein: ENSP00000378588
  ensembl transcript: ENST00000395159
  gene symbol: TIMM9
  hgvsc: ENST00000395159.2:c.-523C>T
  variant of: http://identifiers.org/hgnc/11819
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

14-58894344-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894344
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894344
    reference: chr 14
allele count: 1
allele frequency: 9.267840593141798e-5
allele num: 10790
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.-3T>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-68T>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-50T>A
  variant of: http://identifiers.org/hgnc/19960
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/14-58894914-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894914
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894914
    reference: chr 14
allele count: 2
allele frequency: 4.851778176701761e-5
allele num: 41222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000450855
  ensembl transcript: ENST00000555833
  gene symbol: KIAA0586
  hgvsc: ENST00000555833.1:c.-57+383C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-38-76C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl transcript: ENST00000557192
  gene symbol: KIAA0586
  hgvsc: ENST00000557192.1:n.92+383C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000261244
  ensembl transcript: ENST00000261244
  gene symbol: KIAA0586
  hgvsc: ENST00000261244.5:c.-69C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452536
  ensembl transcript: ENST00000555203
  gene symbol: KIAA0586
  hgvsc: ENST00000555203.1:c.-57+383C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.10-42C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-57+559C>A
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000451831
  ensembl transcript: ENST00000554463
  gene symbol: KIAA0586
  hgvsc: ENST00000554463.1:c.-57+339C>A
  variant of: http://identifiers.org/hgnc/19960
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25877
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5066
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9227
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-58894914-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58894914
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 58894914
    reference: chr 14
allele count: 437
allele frequency: 1.060113531609335e-2
allele num: 41222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000450855
  ensembl transcript: ENST00000555833
  gene symbol: KIAA0586
  hgvsc: ENST00000555833.1:c.-57+383C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000399427
  ensembl transcript: ENST00000423743
  gene symbol: KIAA0586
  hgvsc: ENST00000423743.3:c.-57+559C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000451831
  ensembl transcript: ENST00000554463
  gene symbol: KIAA0586
  hgvsc: ENST00000554463.1:c.-57+339C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452351
  ensembl transcript: ENST00000556134
  gene symbol: KIAA0586
  hgvsc: ENST00000556134.1:c.-38-76C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl transcript: ENST00000557192
  gene symbol: KIAA0586
  hgvsc: ENST00000557192.1:n.92+383C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000261244
  ensembl transcript: ENST00000261244
  gene symbol: KIAA0586
  hgvsc: ENST00000261244.5:c.-69C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000346359
  ensembl transcript: ENST00000354386
  gene symbol: KIAA0586
  hgvsc: ENST00000354386.6:c.10-42C>T
  variant of: http://identifiers.org/hgnc/19960
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100578
  ensembl protein: ENSP00000452536
  ensembl transcript: ENST00000555203
  gene symbol: KIAA0586
  hgvsc: ENST00000555203.1:c.-57+383C>T
  variant of: http://identifiers.org/hgnc/19960
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 1.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 2.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 1.25e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.25e1
  variant carriers: 12
num of homozygotes: 6
reference allele: C

GenotypeQuality
all individuals: 2450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.829367e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.487e0

QD
type: SiteQuality
SIO_000300: 1.36e1

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33158
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3069
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variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5495
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variant carriers: 1

GenotypeQuality
all individuals: 2417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

DP
type: SiteQuality
SIO_000300: 1.82241e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.291e0

VQSLOD
type: SiteQuality
SIO_000300: -2.383e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.136e0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 775
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variant carriers: 0

GenotypeQuality
all individuals: 1098
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variant carriers: 0

GenotypeQuality
all individuals: 1970
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variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5492
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513271390091099e-5
allele num: 66082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.132e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.004e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.155e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.735e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -1.491e0

DP
type: SiteQuality
SIO_000300: 1.811997e6

GenotypeQuality
all individuals: 2624
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5455
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1075
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variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.596757e6

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
all individuals: 3190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
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variant carriers: 0

GenotypeQuality
all individuals: 430
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variant carriers: 0

GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
all individuals: 1709
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 6683
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 185
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GenotypeQuality
all individuals: 2705
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variant carriers: 0

GenotypeQuality
all individuals: 1480
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variant carriers: 0

GenotypeQuality
all individuals: 2868
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.575486586007364e-5
allele num: 15208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.274e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

QD
type: SiteQuality
SIO_000300: 1.599e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

DP
type: SiteQuality
SIO_000300: 2.829966e6

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 34210
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2803
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 330
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GenotypeQuality
all individuals: 1709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 934
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variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.929012345679012e-4
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

FS
type: SiteQuality
SIO_000300: 2.117e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.586e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

QD
type: SiteQuality
SIO_000300: 1.307e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.902e0

DP
type: SiteQuality
SIO_000300: 2.834516e6

GenotypeQuality
all individuals: 2710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 227
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 34210
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2866
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.51267622678042e-4
allele num: 66108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15310
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

QD
type: SiteQuality
SIO_000300: 1.62e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.842277e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 34210
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15310
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.62e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

DP
type: SiteQuality
SIO_000300: 2.842277e6

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 1.446e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

DP
type: SiteQuality
SIO_000300: 2.8465e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.155e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.293326435592343e-4
allele num: 15464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 1.851e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.116e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.81e0

DP
type: SiteQuality
SIO_000300: 2.849569e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510391493475109e-5
allele num: 66208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.197e1

FS
type: SiteQuality
SIO_000300: 4.509e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

DP
type: SiteQuality
SIO_000300: 2.850816e6

MQRankSum
type: SiteQuality
SIO_000300: -6.986e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.138e1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34227
bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 29
allele frequency: 1.833354406372487e-3
allele num: 15818
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.354e0

DP
type: SiteQuality
SIO_000300: 2.865231e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
all individuals: 3198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01313727853441e-5
allele num: 66376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.087e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

FS
type: SiteQuality
SIO_000300: 2.107e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

QD
type: SiteQuality
SIO_000300: 1.32e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009872381411028e-5
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16044
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.881316e6

ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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SIO_000300: 1.0e-4

VQSLOD
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MQRankSum
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SIO_000300: -6.899999999999999e-1

ReadPosRankSum
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MQ
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SIO_000300: 5.929e1

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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QD
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500510173458976e-5
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num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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FS
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QD
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 46

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 46
allele frequency: 6.901104176668267e-4
allele num: 66656
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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FS
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BaseQRankSum
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MQRankSum
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DP
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: -3.66e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16480
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQ
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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Latino
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African
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Other
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South Asian
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European (Non-Finnish)
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66666
num of homozygotes: 0

European (Finnish)
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Other
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Latino
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African
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South Asian
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East Asian
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.156604210039325e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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East Asian
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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ClippingRankSum
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FS
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MQ
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QD
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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Other
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African
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Latino
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South Asian
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FS
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MQ
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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South Asian
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FS
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VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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Latino
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MQRankSum
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -1.127e0

FS
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DP
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VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
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SIO_000300: 6.7e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

African
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Other
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num of homozygotes: 0

DP
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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MQRankSum
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.223990208078335e-4
allele num: 16340
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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MQRankSum
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ClippingRankSum
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DP
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MQ
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FS
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.081e1

ReadPosRankSum
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SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.160631383472609e-4
allele num: 8616
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.0e-3

DP
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11526
num of homozygotes: 0

East Asian
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African
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allele num: 10114
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Other
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South Asian
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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MQ
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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FS
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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African
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South Asian
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508659706716553e-5
allele num: 66284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.847624e6

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.86e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

QD
type: SiteQuality
SIO_000300: 1.456e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
all individuals: 1438
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.995609658750748e-4
allele num: 10022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.843e1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e0

DP
type: SiteQuality
SIO_000300: 2.84371e6

FS
type: SiteQuality
SIO_000300: 6.541e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 2673
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.696e0

DP
type: SiteQuality
SIO_000300: 2.839017e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.221e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.68e-2

QD
type: SiteQuality
SIO_000300: 1.806e1

GenotypeQuality
all individuals: 990
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9908
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.059226627508566e-4
allele num: 16344
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

FS
type: SiteQuality
SIO_000300: 9.717000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 2.119594e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.068e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.26e0

GenotypeQuality
all individuals: 6738
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
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variant carriers: 0

GenotypeQuality
all individuals: 727
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9908
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
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GenotypeQuality
all individuals: 3228
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022974607013301e-5
allele num: 66160
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.119594e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

FS
type: SiteQuality
SIO_000300: 9.717000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -7.068e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.26e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.208e1

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
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variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 6620
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 69

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2510
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 889
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 62
allele frequency: 5.998452012383901e-3
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128201985537444e-5
allele num: 16318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.350095702105446e-4
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65984
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

DP
type: SiteQuality
SIO_000300: 2.126369e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

MQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

FS
type: SiteQuality
SIO_000300: 1.328e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.386e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.356e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 496
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 747
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 506
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GenotypeQuality
all individuals: 1777
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GenotypeQuality
all individuals: 9878
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6821
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.83060776177691e-4
allele num: 16388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 2.134931e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

QD
type: SiteQuality
SIO_000300: 1.623e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 496
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
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variant carriers: 0

GenotypeQuality
all individuals: 618
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 9878
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 747
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 2.134931e6

QD
type: SiteQuality
SIO_000300: 1.623e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505298651252408e-5
allele num: 66432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQRankSum
type: SiteQuality
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QD
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MQ
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ClippingRankSum
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SIO_000300: -2.83e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.582e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

DP
type: SiteQuality
SIO_000300: 2.163326e6

GenotypeQuality
all individuals: 2518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.600554785020804e-4
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.54e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.335e1

BaseQRankSum
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SIO_000300: 3.69e0

ReadPosRankSum
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SIO_000300: 8.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.957e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

DP
type: SiteQuality
SIO_000300: 2.163535e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053201733269138e-4
allele num: 66464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
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SIO_000300: 3.17e0

MQRankSum
type: SiteQuality
SIO_000300: -1.27e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

DP
type: SiteQuality
SIO_000300: 2.164944e6

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.165381e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: -1.17e0

ClippingRankSum
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SIO_000300: -1.595e0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-2

FS
type: SiteQuality
SIO_000300: 1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
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SIO_000300: -4.55e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 2.164943e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

QD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -2.13e-1

DP
type: SiteQuality
SIO_000300: 2.164509e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011685339115769e-5
allele num: 66408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.81e0

ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 132
bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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DP
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.159823706796567e-4
allele num: 8622
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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FS
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BaseQRankSum
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QD
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11492
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East Asian
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allele frequency: 1.164686699277894e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65656
num of homozygotes: 0

East Asian
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allele frequency: 1.16795141322121e-4
allele num: 8562
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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DP
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SIO_000300: 2.095238e6

BaseQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: 5.8e-3

ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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SIO_000300: -9.28e-1

MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.523739867129884e-5
allele num: 65628
num of homozygotes: 0

FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 11
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allele num: 65390
num of homozygotes: 0

European (Finnish)
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allele num: 6590
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Other
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South Asian
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African
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Latino
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allele num: 11426
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East Asian
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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East Asian
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South Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Latino
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Other
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European (Finnish)
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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SIO_000300: 2.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.79e0

VQSLOD
type: SiteQuality
SIO_000300: -6.627e-1

GenotypeQuality
all individuals: 20
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.664535038635758e-4
allele num: 7506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

DP
type: SiteQuality
SIO_000300: 4.19158e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.63e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.468e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 1.377e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.18952e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.886e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.397e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.09e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.697e1

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.875e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 4.19212e5

MQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

FS
type: SiteQuality
SIO_000300: 4.268e0

VQSLOD
type: SiteQuality
SIO_000300: -1.575e0

QD
type: SiteQuality
SIO_000300: 1.425e1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 9.25e0

FS
type: SiteQuality
SIO_000300: 5.178e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.19e-2

DP
type: SiteQuality
SIO_000300: 4.19237e5

VQSLOD
type: SiteQuality
SIO_000300: -3.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.695e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

FS
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 5.856e1

MQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

DP
type: SiteQuality
SIO_000300: 4.19293e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

FS
type: SiteQuality
SIO_000300: 8.321e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: -1.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.11e-2

DP
type: SiteQuality
SIO_000300: 4.19296e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

GenotypeQuality
all individuals: 3715
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3598
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 415
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5487
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21258
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.321801718133271e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.418e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 7.09024e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0