15-67713703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713703
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713703
    reference: chr 15
allele count: 17
allele frequency: 1.402038729258074e-4
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1276G>A
  hgvsp: ENSP00000353419.4:p.Gly426Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.866C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.861C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1501G>A
  hgvsp: ENSP00000351617.3:p.Gly501Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2293G>A
  hgvsp: ENSP00000336861.4:p.Gly765Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1264G>A
  hgvsp: ENSP00000444118.1:p.Gly422Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1609G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.772C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly765Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

15-67713705-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713705
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713705
    reference: chr 15
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.864C>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2295G>T
  hgvsp: ENST00000335894.4:c.2295G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.770C>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1278G>T
  hgvsp: ENST00000360277.4:c.1278G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1503G>T
  hgvsp: ENST00000358767.3:c.1503G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1611G>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1266G>T
  hgvsp: ENST00000546225.1:c.1266G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.859C>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly765Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

15-67713715-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713715
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713715
    reference: chr 15
allele count: 20
allele frequency: 1.648641519388024e-4
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2305G>A
  hgvsp: ENSP00000336861.4:p.Val769Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1513G>A
  hgvsp: ENSP00000351617.3:p.Val505Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.854C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1621G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1276G>A
  hgvsp: ENSP00000444118.1:p.Val426Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.849C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.760C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1288G>A
  hgvsp: ENSP00000353419.4:p.Val430Met
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val769Met
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

15-67713723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713723
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713723
    reference: chr 15
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.841C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1521G>A
  hgvsp: ENST00000358767.3:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.752C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1284G>A
  hgvsp: ENST00000546225.1:c.1284G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1629G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.846C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1296G>A
  hgvsp: ENST00000360277.4:c.1296G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2313G>A
  hgvsp: ENST00000335894.4:c.2313G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6413
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser771Ser
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

15-67713723-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713723
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713723
    reference: chr 15
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1629G>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2313G>C
  hgvsp: ENST00000335894.4:c.2313G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1284G>C
  hgvsp: ENST00000546225.1:c.1284G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.841C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1521G>C
  hgvsp: ENST00000358767.3:c.1521G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1296G>C
  hgvsp: ENST00000360277.4:c.1296G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.752C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.846C>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser771Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

15-67713729-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713729
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713729
    reference: chr 15
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.746C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1302G>C
  hgvsp: ENST00000360277.4:c.1302G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.840C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1527G>C
  hgvsp: ENST00000358767.3:c.1527G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1290G>C
  hgvsp: ENST00000546225.1:c.1290G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1635G>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2319G>C
  hgvsp: ENST00000335894.4:c.2319G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.835C>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly773Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

15-67713735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713735
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713735
    reference: chr 15
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1308G>A
  hgvsp: ENST00000360277.4:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.834C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.829C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2325G>A
  hgvsp: ENST00000335894.4:c.2325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1296G>A
  hgvsp: ENST00000546225.1:c.1296G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.740C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1641G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1533G>A
  hgvsp: ENST00000358767.3:c.1533G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln775Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

15-67713740-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713740
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713740
    reference: chr 15
allele count: 3
allele frequency: 2.471943441934048e-5
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1646A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.735T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1313A>G
  hgvsp: ENSP00000353419.4:p.His438Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1301A>G
  hgvsp: ENSP00000444118.1:p.His434Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.829T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2330A>G
  hgvsp: ENSP00000336861.4:p.His777Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1538A>G
  hgvsp: ENSP00000351617.3:p.His513Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.824T>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42004
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His777Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-67713750-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713750
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713750
    reference: chr 15
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.725G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.814G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1323C>A
  hgvsp: ENSP00000353419.4:p.Ser441Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1548C>A
  hgvsp: ENSP00000351617.3:p.Ser516Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2340C>A
  hgvsp: ENSP00000336861.4:p.Ser780Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1311C>A
  hgvsp: ENSP00000444118.1:p.Ser437Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.819G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1656C>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser780Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-67713774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713774
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713774
    reference: chr 15
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1347C>T
  hgvsp: ENST00000360277.4:c.1347C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1572C>T
  hgvsp: ENST00000358767.3:c.1572C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1680C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.701G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2364C>T
  hgvsp: ENST00000335894.4:c.2364C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.790G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1335C>T
  hgvsp: ENST00000546225.1:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.795G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr788Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-67713775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713775
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713775
    reference: chr 15
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2365G>A
  hgvsp: ENSP00000336861.4:p.Val789Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.794C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.700C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1573G>A
  hgvsp: ENSP00000351617.3:p.Val525Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1348G>A
  hgvsp: ENSP00000353419.4:p.Val450Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1336G>A
  hgvsp: ENSP00000444118.1:p.Val446Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1681G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.789C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val789Met
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

15-67713781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713781
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713781
    reference: chr 15
allele count: 7
allele frequency: 5.76672762921589e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1342C>T
  hgvsp: ENSP00000444118.1:p.Gln448Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.788G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1579C>T
  hgvsp: ENSP00000351617.3:p.Gln527Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1354C>T
  hgvsp: ENSP00000353419.4:p.Gln452Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.783G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.694G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2371C>T
  hgvsp: ENSP00000336861.4:p.Gln791Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1687C>T
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45728
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln791Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

15-67713795-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713795
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713795
    reference: chr 15
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2385T>G
  hgvsp: ENSP00000336861.4:p.Asp795Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1701T>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1368T>G
  hgvsp: ENSP00000353419.4:p.Asp456Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.774A>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.769A>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.680A>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1356T>G
  hgvsp: ENSP00000444118.1:p.Asp452Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1593T>G
  hgvsp: ENSP00000351617.3:p.Asp531Glu
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp795Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

15-67713813-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713813
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713813
    reference: chr 15
allele count: 5
allele frequency: 4.119023297195769e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.751A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1374T>C
  hgvsp: ENST00000546225.1:c.1374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1386T>C
  hgvsp: ENST00000360277.4:c.1386T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1719T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2403T>C
  hgvsp: ENST00000335894.4:c.2403T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1611T>C
  hgvsp: ENST00000358767.3:c.1611T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.756A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.662A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr801Tyr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

15-67713818-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713818
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713818
    reference: chr 15
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.746C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1391G>A
  hgvsp: ENSP00000353419.4:p.Cys464Tyr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1379G>A
  hgvsp: ENSP00000444118.1:p.Cys460Tyr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1616G>A
  hgvsp: ENSP00000351617.3:p.Cys539Tyr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1724G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.751C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2408G>A
  hgvsp: ENSP00000336861.4:p.Cys803Tyr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.657C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6433
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys803Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

15-67713825-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713825
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713825
    reference: chr 15
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2415A>G
  hgvsp: ENST00000335894.4:c.2415A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.739T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.650T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1731A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1386A>G
  hgvsp: ENST00000546225.1:c.1386A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1398A>G
  hgvsp: ENST00000360277.4:c.1398A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.744T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1623A>G
  hgvsp: ENST00000358767.3:c.1623A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln805Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

15-67713836-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713836
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713836
    reference: chr 15
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2426C>G
  hgvsp: ENSP00000336861.4:p.Ala809Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1409C>G
  hgvsp: ENSP00000353419.4:p.Ala470Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1634C>G
  hgvsp: ENSP00000351617.3:p.Ala545Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1397C>G
  hgvsp: ENSP00000444118.1:p.Ala466Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1742C>G
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala809Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

15-67713848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713848
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713848
    reference: chr 15
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1754G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-12C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-12C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1409G>A
  hgvsp: ENSP00000444118.1:p.Arg470Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2438G>A
  hgvsp: ENSP00000336861.4:p.Arg813Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1421G>A
  hgvsp: ENSP00000353419.4:p.Arg474Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1646G>A
  hgvsp: ENSP00000351617.3:p.Arg549Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-12C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45716
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg813Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

15-67713850-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713850
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713850
    reference: chr 15
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1411G>C
  hgvsp: ENSP00000444118.1:p.Asp471His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1423G>C
  hgvsp: ENSP00000353419.4:p.Asp475His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2440G>C
  hgvsp: ENSP00000336861.4:p.Asp814His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-14C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-14C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1648G>C
  hgvsp: ENSP00000351617.3:p.Asp550His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-14C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1756G>C
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp814His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-67713867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713867
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713867
    reference: chr 15
allele count: 8
allele frequency: 6.592175088170342e-5
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-31A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1428T>C
  hgvsp: ENST00000546225.1:c.1428T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1665T>C
  hgvsp: ENST00000358767.3:c.1665T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-31A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2457T>C
  hgvsp: ENST00000335894.4:c.2457T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1440T>C
  hgvsp: ENST00000360277.4:c.1440T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1773T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-31A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe819Phe
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

15-67713869-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713869
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713869
    reference: chr 15
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-33G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-33G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1775C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-33G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1430C>T
  hgvsp: ENSP00000444118.1:p.Ser477Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2459C>T
  hgvsp: ENSP00000336861.4:p.Ser820Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1667C>T
  hgvsp: ENSP00000351617.3:p.Ser556Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1442C>T
  hgvsp: ENSP00000353419.4:p.Ser481Leu
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser820Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

15-67713870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713870
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713870
    reference: chr 15
allele count: 4
allele frequency: 3.296685183048445e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1431G>A
  hgvsp: ENST00000546225.1:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1776G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-34C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2460G>A
  hgvsp: ENST00000335894.4:c.2460G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1443G>A
  hgvsp: ENST00000360277.4:c.1443G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1668G>A
  hgvsp: ENST00000358767.3:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-34C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-34C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser820Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

15-67713873-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713873
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713873
    reference: chr 15
allele count: 6
allele frequency: 4.945353840067256e-5
allele num: 121326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1779A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-37T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1446A>G
  hgvsp: ENSP00000353419.4:p.Ile482Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1434A>G
  hgvsp: ENSP00000444118.1:p.Ile478Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1671A>G
  hgvsp: ENSP00000351617.3:p.Ile557Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2463A>G
  hgvsp: ENSP00000336861.4:p.Ile821Met
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-37T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-37T>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile821Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

15-67713874-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713874
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713874
    reference: chr 15
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2464G>C
  hgvsp: ENSP00000336861.4:p.Asp822His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1672G>C
  hgvsp: ENSP00000351617.3:p.Asp558His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-38C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-38C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-38C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1447G>C
  hgvsp: ENSP00000353419.4:p.Asp483His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1435G>C
  hgvsp: ENSP00000444118.1:p.Asp479His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1780G>C
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41879
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45656
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp822His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-67713893-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713893
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713893
    reference: chr 15
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-57T>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1799A>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-57T>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2483A>C
  hgvsp: ENSP00000336861.4:p.Asp828Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1454A>C
  hgvsp: ENSP00000444118.1:p.Asp485Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1691A>C
  hgvsp: ENSP00000351617.3:p.Asp564Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1466A>C
  hgvsp: ENSP00000353419.4:p.Asp489Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-57T>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp828Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-67713897-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713897
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713897
    reference: chr 15
allele count: 3
allele frequency: 2.475942095967516e-5
allele num: 121166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1803A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1458A>G
  hgvsp: ENST00000546225.1:c.1458A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2487A>G
  hgvsp: ENST00000335894.4:c.2487A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1695A>G
  hgvsp: ENST00000358767.3:c.1695A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-61T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-61T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-61T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1470A>G
  hgvsp: ENST00000360277.4:c.1470A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro829Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

15-67713927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713927
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713927
    reference: chr 15
allele count: 5
allele frequency: 4.153099873745764e-5
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-91C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+12G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-91C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+12G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+12G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-91C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+12G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+12G>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

15-67713937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713937
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713937
    reference: chr 15
allele count: 5
allele frequency: 4.174110497053078e-5
allele num: 119786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-101G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+22C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-101G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+22C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-101G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+22C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+22C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+22C>T
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39353
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

15-67713938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713938
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713938
    reference: chr 15
allele count: 14
allele frequency: 1.168946111584256e-4
allele num: 119766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+23G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+23G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+23G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-102C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-102C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+23G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-102C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+23G>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/15-67713962-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713962
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713962
    reference: chr 15
allele count: 2
allele frequency: 1.705233361185478e-5
allele num: 117286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+47C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-126G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-126G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+47C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+47C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+47C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+47C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-126G>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35814
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

15-67713963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713963
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713963
    reference: chr 15
allele count: 9
allele frequency: 7.682064939055618e-5
allele num: 117156
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+48C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+48C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-127G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-127G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+48C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-127G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+48C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+48C>T
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35664
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5472
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

15-67713964-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713964
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713964
    reference: chr 15
allele count: 7
allele frequency: 5.978613644904513e-5
allele num: 117084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+49G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+49G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+49G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-128C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-128C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+49G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-128C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+49G>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9623
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

15-67713967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67713967
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67713967
    reference: chr 15
allele count: 6
allele frequency: 5.141828777101722e-5
allele num: 116690
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2505+52C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.639-131G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1821+52C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1488+52C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1713+52C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.733-131G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1476+52C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.728-131G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10484
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

15-67757414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757414
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757414
    reference: chr 15
allele count: 12
allele frequency: 1.016501202859757e-4
allele num: 118052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-51G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-51G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-51G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1418C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-51G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-51G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5101C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1418C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3097
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

15-67757424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757424
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757424
    reference: chr 15
allele count: 48
allele frequency: 4.055287080531243e-4
allele num: 118364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1408C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-41G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-41G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5111C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-41G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-41G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-41G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1408C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-67757437-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757437
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757437
    reference: chr 15
allele count: 1
allele frequency: 8.403220113947665e-6
allele num: 119002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-28T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-28T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-28T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1395A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5124A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-28T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-28T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1395A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13894
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/15-67757446-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757446
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757446
    reference: chr 15
allele count: 1
allele frequency: 8.371283150281276e-6
allele num: 119456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-19C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-19C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-19C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1386G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-19C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5133G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1386G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-19C>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7813
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

15-67757446-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757446
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757446
    reference: chr 15
allele count: 7
allele frequency: 5.859898205196892e-5
allele num: 119456
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-19C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-19C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1386G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1386G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5133G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-19C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-19C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-19C>T
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

15-67757447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757447
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757447
    reference: chr 15
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5134C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1714-18G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1385C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1489-18G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2506-18G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1385C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1477-18G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1822-18G>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

15-67757476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757476
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757476
    reference: chr 15
allele count: 2
allele frequency: 1.651391297167864e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2517C>T
  hgvsp: ENST00000335894.4:c.2517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1488C>T
  hgvsp: ENST00000546225.1:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1500C>T
  hgvsp: ENST00000360277.4:c.1500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1833C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1356G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1725C>T
  hgvsp: ENST00000358767.3:c.1725C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5163G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1356G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr839Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

15-67757477-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757477
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757477
    reference: chr 15
allele count: 4
allele frequency: 3.300983693140556e-5
allele num: 121176
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2518G>C
  hgvsp: ENSP00000336861.4:p.Gly840Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5164C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1355C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1834G>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1355C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1489G>C
  hgvsp: ENSP00000444118.1:p.Gly497Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1501G>C
  hgvsp: ENSP00000353419.4:p.Gly501Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1726G>C
  hgvsp: ENSP00000351617.3:p.Gly576Arg
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8050
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly840Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

15-67757487-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757487
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757487
    reference: chr 15
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2528T>A
  hgvsp: ENSP00000336861.4:p.Leu843His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1844T>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5174A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1345A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1511T>A
  hgvsp: ENSP00000353419.4:p.Leu504His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1499T>A
  hgvsp: ENSP00000444118.1:p.Leu500His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1345A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1736T>A
  hgvsp: ENSP00000351617.3:p.Leu579His
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3099
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu843His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

15-67757489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757489
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757489
    reference: chr 15
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5176C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1343C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1501G>A
  hgvsp: ENSP00000444118.1:p.Ala501Thr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1343C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1513G>A
  hgvsp: ENSP00000353419.4:p.Ala505Thr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1738G>A
  hgvsp: ENSP00000351617.3:p.Ala580Thr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2530G>A
  hgvsp: ENSP00000336861.4:p.Ala844Thr
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1846G>A
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4753
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala844Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

15-67757494-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757494
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757494
    reference: chr 15
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1338A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1338A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2535T>A
  hgvsp: ENSP00000336861.4:p.Tyr845Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1518T>A
  hgvsp: ENSP00000353419.4:p.Tyr506Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1506T>A
  hgvsp: ENSP00000444118.1:p.Tyr502Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1851T>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1743T>A
  hgvsp: ENSP00000351617.3:p.Tyr581Ter
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5181A>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr845Ter
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

15-67757494-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757494
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757494
    reference: chr 15
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2535T>C
  hgvsp: ENST00000335894.4:c.2535T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1338A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1506T>C
  hgvsp: ENST00000546225.1:c.1506T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1851T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5181A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1518T>C
  hgvsp: ENST00000360277.4:c.1518T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1743T>C
  hgvsp: ENST00000358767.3:c.1743T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1338A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr845Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

15-67757499-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757499
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757499
    reference: chr 15
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1511A>G
  hgvsp: ENSP00000444118.1:p.Asp504Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5186T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1333T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1856A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1523A>G
  hgvsp: ENSP00000353419.4:p.Asp508Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1748A>G
  hgvsp: ENSP00000351617.3:p.Asp583Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2540A>G
  hgvsp: ENSP00000336861.4:p.Asp847Gly
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1333T>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp847Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/15-67757501-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757501
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757501
    reference: chr 15
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1750C>A
  hgvsp: ENSP00000351617.3:p.Gln584Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1525C>A
  hgvsp: ENSP00000353419.4:p.Gln509Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2542C>A
  hgvsp: ENSP00000336861.4:p.Gln848Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1331G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1513C>A
  hgvsp: ENSP00000444118.1:p.Gln505Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1331G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1858C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5188G>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln848Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

15-67757518-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757518
    reference: chr 15
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1530A>G
  hgvsp: ENST00000546225.1:c.1530A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1767A>G
  hgvsp: ENST00000358767.3:c.1767A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1314T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2559A>G
  hgvsp: ENST00000335894.4:c.2559A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5205T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1542A>G
  hgvsp: ENST00000360277.4:c.1542A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1314T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1875A>G
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21417
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8077
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln853Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-67757518-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757518
    reference: chr 15
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1767A>T
  hgvsp: ENSP00000351617.3:p.Gln589His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1314T>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1314T>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1875A>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1542A>T
  hgvsp: ENSP00000353419.4:p.Gln514His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1530A>T
  hgvsp: ENSP00000444118.1:p.Gln510His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2559A>T
  hgvsp: ENSP00000336861.4:p.Gln853His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5205T>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3099
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21417
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln853His
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

15-67757521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757521
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757521
    reference: chr 15
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1878C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1311G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1770C>T
  hgvsp: ENST00000358767.3:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1533C>T
  hgvsp: ENST00000546225.1:c.1533C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2562C>T
  hgvsp: ENST00000335894.4:c.2562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1545C>T
  hgvsp: ENST00000360277.4:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1311G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5208G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13878
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu854Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

15-67757527-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757527
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757527
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2568A>G
  hgvsp: ENST00000335894.4:c.2568A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1884A>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1551A>G
  hgvsp: ENST00000360277.4:c.1551A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1776A>G
  hgvsp: ENST00000358767.3:c.1776A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5214T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1539A>G
  hgvsp: ENST00000546225.1:c.1539A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1305T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1305T>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3097
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu856Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

15-67757539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757539
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757539
    reference: chr 15
allele count: 1283
allele frequency: 1.05685431390962e-2
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1293G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1896C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1788C>T
  hgvsp: ENST00000358767.3:c.1788C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2580C>T
  hgvsp: ENST00000335894.4:c.2580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1293G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1563C>T
  hgvsp: ENST00000360277.4:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5226G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1551C>T
  hgvsp: ENST00000546225.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 432
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 15137
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 5.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 6.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn860Asn
num of homozygotes: 7
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

15-67757559-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757559
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757559
    reference: chr 15
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1273A>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2600T>G
  hgvsp: ENSP00000336861.4:p.Leu867Trp
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1583T>G
  hgvsp: ENSP00000353419.4:p.Leu528Trp
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1916T>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1571T>G
  hgvsp: ENSP00000444118.1:p.Leu524Trp
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1808T>G
  hgvsp: ENSP00000351617.3:p.Leu603Trp
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1273A>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5246A>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13157
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3355
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21816
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu867Trp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

15-67757563-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757563
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757563
    reference: chr 15
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2604C>G
  hgvsp: ENSP00000336861.4:p.Ser868Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1920C>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1575C>G
  hgvsp: ENSP00000444118.1:p.Ser525Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1812C>G
  hgvsp: ENSP00000351617.3:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1269G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1587C>G
  hgvsp: ENSP00000353419.4:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1269G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5250G>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser868Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/15-67757566-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757566
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757566
    reference: chr 15
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1266G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1578C>A
  hgvsp: ENST00000546225.1:c.1578C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1590C>A
  hgvsp: ENST00000360277.4:c.1590C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1923C>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5253G>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2607C>A
  hgvsp: ENST00000335894.4:c.2607C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1815C>A
  hgvsp: ENST00000358767.3:c.1815C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1266G>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr869Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

15-67757566-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757566
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757566
    reference: chr 15
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1578C>G
  hgvsp: ENST00000546225.1:c.1578C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5253G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1923C>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1590C>G
  hgvsp: ENST00000360277.4:c.1590C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1266G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1815C>G
  hgvsp: ENST00000358767.3:c.1815C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2607C>G
  hgvsp: ENST00000335894.4:c.2607C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1266G>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr869Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

15-67757573-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757573
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757573
    reference: chr 15
allele count: 6
allele frequency: 4.942095118857387e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2614G>C
  hgvsp: ENSP00000336861.4:p.Val872Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5260C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1597G>C
  hgvsp: ENSP00000353419.4:p.Val533Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1585G>C
  hgvsp: ENSP00000444118.1:p.Val529Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1259C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1259C>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1822G>C
  hgvsp: ENSP00000351617.3:p.Val608Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1930G>C
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21836
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val872Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

15-67757574-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757574
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757574
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5261A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1258A>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1586T>A
  hgvsp: ENSP00000444118.1:p.Val529Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1598T>A
  hgvsp: ENSP00000353419.4:p.Val533Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2615T>A
  hgvsp: ENSP00000336861.4:p.Val872Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1931T>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1823T>A
  hgvsp: ENSP00000351617.3:p.Val608Glu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1258A>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21832
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val872Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

15-67757574-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757574
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757574
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1586T>C
  hgvsp: ENSP00000444118.1:p.Val529Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2615T>C
  hgvsp: ENSP00000336861.4:p.Val872Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1931T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1823T>C
  hgvsp: ENSP00000351617.3:p.Val608Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5261A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1258A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1598T>C
  hgvsp: ENSP00000353419.4:p.Val533Ala
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1258A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4161
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4796
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val872Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

15-67757578-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757578
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757578
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1590C>G
  hgvsp: ENST00000546225.1:c.1590C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1935C>G
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1602C>G
  hgvsp: ENST00000360277.4:c.1602C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1254G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1254G>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1827C>G
  hgvsp: ENST00000358767.3:c.1827C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2619C>G
  hgvsp: ENST00000335894.4:c.2619C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5265G>C
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro873Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-67757579-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757579
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757579
    reference: chr 15
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1591C>T
  hgvsp: ENSP00000444118.1:p.Arg531Cys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1828C>T
  hgvsp: ENSP00000351617.3:p.Arg610Cys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1603C>T
  hgvsp: ENSP00000353419.4:p.Arg535Cys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1936C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1253G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5266G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1253G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2620C>T
  hgvsp: ENSP00000336861.4:p.Arg874Cys
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg874Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

15-67757580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757580
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757580
    reference: chr 15
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1937G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2621G>A
  hgvsp: ENSP00000336861.4:p.Arg874His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1604G>A
  hgvsp: ENSP00000353419.4:p.Arg535His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1829G>A
  hgvsp: ENSP00000351617.3:p.Arg610His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1252C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1592G>A
  hgvsp: ENSP00000444118.1:p.Arg531His
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5267C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1252C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg874His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

15-67757580-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757580
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757580
    reference: chr 15
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1592G>T
  hgvsp: ENSP00000444118.1:p.Arg531Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1604G>T
  hgvsp: ENSP00000353419.4:p.Arg535Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2621G>T
  hgvsp: ENSP00000336861.4:p.Arg874Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1829G>T
  hgvsp: ENSP00000351617.3:p.Arg610Leu
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1937G>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1252C>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1252C>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5267C>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13149
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg874Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

15-67757584-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757584
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757584
    reference: chr 15
allele count: 9
allele frequency: 7.413386929375134e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1941T>C
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1248A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5271A>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1833T>C
  hgvsp: ENST00000358767.3:c.1833T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1608T>C
  hgvsp: ENST00000360277.4:c.1608T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1596T>C
  hgvsp: ENST00000546225.1:c.1596T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2625T>C
  hgvsp: ENST00000335894.4:c.2625T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1248A>G
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13147
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe875Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

15-67757585-GTTCCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757585
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757580
    reference: chr 15
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2627_2631delTTCCA
  hgvsp: ENSP00000336861.4:p.Val876GlufsTer47
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1242_448+1246delTGGAA
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1943_*1947delTTCCA
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1835_1839delTTCCA
  hgvsp: ENSP00000351617.3:p.Val612GlufsTer47
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1598_1602delTTCCA
  hgvsp: ENSP00000444118.1:p.Val533GlufsTer47
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1242_647+1246delTGGAA
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5277_275-5273delTGGAA
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1610_1614delTTCCA
  hgvsp: ENSP00000353419.4:p.Val537GlufsTer47
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val876GlufsTer47
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: GTTCCA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-67757588-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757588
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757588
    reference: chr 15
allele count: 22
allele frequency: 1.812280672850388e-4
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1600C>T
  hgvsp: ENSP00000444118.1:p.Pro534Ser
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5275G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2629C>T
  hgvsp: ENSP00000336861.4:p.Pro877Ser
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1945C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1837C>T
  hgvsp: ENSP00000351617.3:p.Pro613Ser
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1244G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1612C>T
  hgvsp: ENSP00000353419.4:p.Pro538Ser
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1244G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 14154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4795
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro877Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/15-67757591-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757591
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757591
    reference: chr 15
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5278T>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1241T>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1241T>G
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1603A>C
  hgvsp: ENSP00000444118.1:p.Lys535Gln
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1615A>C
  hgvsp: ENSP00000353419.4:p.Lys539Gln
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1840A>C
  hgvsp: ENSP00000351617.3:p.Lys614Gln
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2632A>C
  hgvsp: ENSP00000336861.4:p.Lys878Gln
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1948A>C
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15534
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys878Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

15-67757596-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757596
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757596
    reference: chr 15
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1236T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5283T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1620A>G
  hgvsp: ENST00000360277.4:c.1620A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1236T>C
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1845A>G
  hgvsp: ENST00000358767.3:c.1845A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2637A>G
  hgvsp: ENST00000335894.4:c.2637A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1608A>G
  hgvsp: ENST00000546225.1:c.1608A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1953A>G
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13130
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8214
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu879Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

15-67757598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757598
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757598
    reference: chr 15
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1847G>A
  hgvsp: ENSP00000351617.3:p.Arg616Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1610G>A
  hgvsp: ENSP00000444118.1:p.Arg537Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1234C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1622G>A
  hgvsp: ENSP00000353419.4:p.Arg541Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1955G>A
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1234C>T
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2639G>A
  hgvsp: ENSP00000336861.4:p.Arg880Lys
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5285C>T
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5834
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21839
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg880Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

15-67757605-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757605
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757605
    reference: chr 15
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1629A>T
  hgvsp: ENSP00000353419.4:p.Lys543Asn
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1227T>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2646A>T
  hgvsp: ENSP00000336861.4:p.Lys882Asn
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1227T>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1854A>T
  hgvsp: ENSP00000351617.3:p.Lys618Asn
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5292T>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1617A>T
  hgvsp: ENSP00000444118.1:p.Lys539Asn
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1962A>T
  variant of: http://identifiers.org/hgnc/25721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8209
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys882Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

15-67757607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67757607
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 67757607
    reference: chr 15
allele count: 422
allele frequency: 3.477773565624434e-3
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559285
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559285.1:n.275-5294G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000353419
  ensembl transcript: ENST00000360277
  gene symbol: IQCH
  hgvsc: ENST00000360277.4:c.1631C>T
  hgvsp: ENSP00000353419.4:p.Thr544Ile
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000336861
  ensembl transcript: ENST00000335894
  gene symbol: IQCH
  hgvsc: ENST00000335894.4:c.2648C>T
  hgvsp: ENSP00000336861.4:p.Thr883Ile
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000444118
  ensembl transcript: ENST00000546225
  gene symbol: IQCH
  hgvsc: ENST00000546225.1:c.1619C>T
  hgvsp: ENSP00000444118.1:p.Thr540Ile
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000561232
  gene symbol: IQCH-AS1
  hgvsc: ENST00000561232.1:n.647+1225G>A
  variant of: http://identifiers.org/hgnc/44104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000351617
  ensembl transcript: ENST00000358767
  gene symbol: IQCH
  hgvsc: ENST00000358767.3:c.1856C>T
  hgvsp: ENSP00000351617.3:p.Thr619Ile
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103599
  ensembl protein: ENSP00000421223
  ensembl transcript: ENST00000514049
  gene symbol: IQCH
  hgvsc: ENST00000514049.1:c.*1964C>T
  variant of: http://identifiers.org/hgnc/25721
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259673
  ensembl transcript: ENST00000559298
  gene symbol: IQCH-AS1
  hgvsc: ENST00000559298.1:n.448+1225G>A
  variant of: http://identifiers.org/hgnc/44104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 6669
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 15464
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9075
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 19
hgvs: p.Thr883Ile
num of homozygotes: 6
reference allele: C

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45609
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.652182272639877e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.496926260233305e-5
allele num: 66694
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 1.479761e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

FS
type: SiteQuality
SIO_000300: 1.143e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2055
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.5e-1

DP
type: SiteQuality
SIO_000300: 1.479539e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 8.305e0

QD
type: SiteQuality
SIO_000300: 1.246e1

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1569
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.398297208981623e-4
allele num: 66714
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.529e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

DP
type: SiteQuality
SIO_000300: 1.481622e6

QD
type: SiteQuality
SIO_000300: 1.325e1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.481982e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

FS
type: SiteQuality
SIO_000300: 3.374e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.254e1

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 3.374e0

DP
type: SiteQuality
SIO_000300: 1.481982e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 6419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45675
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

FS
type: SiteQuality
SIO_000300: 1.716e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.418e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.84e-1

DP
type: SiteQuality
SIO_000300: 1.482456e6

GenotypeQuality
all individuals: 6429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.846e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.035e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: -1.319e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 9.360000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.482856e6

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495459585818323e-5
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.59e-1

QD
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SIO_000300: 1.184e1

FS
type: SiteQuality
SIO_000300: 9.641e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.801e0

DP
type: SiteQuality
SIO_000300: 1.483244e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.865e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

FS
type: SiteQuality
SIO_000300: 7.758e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.071e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 2.151e0

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

DP
type: SiteQuality
SIO_000300: 1.483745e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.068e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.215e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.483978e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

East Asian
type: Population
allele count: 7
allele frequency: 8.105604446503011e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.484294e6

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

QD
type: SiteQuality
SIO_000300: 1.238e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.483669e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.492208103572285e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
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InbreedingCoeff
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8632
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South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 1.204e0

ReadPosRankSum
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SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

VQSLOD
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SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 1.483916e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.461e0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

FS
type: SiteQuality
SIO_000300: 2.3167e1

BaseQRankSum
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SIO_000300: -2.238e0

DP
type: SiteQuality
SIO_000300: 1.483906e6

QD
type: SiteQuality
SIO_000300: 1.119e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.483777e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.559e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 7.64e0

VQSLOD
type: SiteQuality
SIO_000300: -7.872e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

East Asian
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allele count: 8
allele frequency: 9.276437847866419e-4
allele num: 8624
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

QD
type: SiteQuality
SIO_000300: 1.459e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 1.787e0

DP
type: SiteQuality
SIO_000300: 1.483924e6

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.483329e6

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

FS
type: SiteQuality
SIO_000300: 5.374e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
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African
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allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.768e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

ReadPosRankSum
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.483519e6

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

South Asian
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
type: Population
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
SIO_000300: -1.48e0

QD
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FS
type: SiteQuality
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.897430944562488e-4
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

FS
type: SiteQuality
SIO_000300: 8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.479786e6

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.028817748839453e-5
allele num: 66348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

QD
type: SiteQuality
SIO_000300: 1.254e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 3.771e0

DP
type: SiteQuality
SIO_000300: 1.461278e6

GenotypeQuality
all individuals: 6038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 2267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511167528032158e-5
allele num: 66174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.486750348675035e-4
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.370238246910434e-5
allele num: 15698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 1.399e0

QD
type: SiteQuality
SIO_000300: 1.238e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.440175e6

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42163
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variant carriers: 0

GenotypeQuality
all individuals: 2262
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variant carriers: 0

GenotypeQuality
all individuals: 1955
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variant carriers: 0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
all individuals: 6037
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.879953152449736e-4
allele num: 10246
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15702
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.139534883720931e-4
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 1.438135e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.034e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

QD
type: SiteQuality
SIO_000300: 1.202e1

GenotypeQuality
all individuals: 1885
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2246
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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GenotypeQuality
all individuals: 1059
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variant carriers: 0

GenotypeQuality
all individuals: 33245
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variant carriers: 0

GenotypeQuality
all individuals: 1393
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variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 1907
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variant carriers: 0

GenotypeQuality
all individuals: 5482
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variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1359
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65372
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.974067424695791e-5
allele num: 10026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.969612489545581e-5
allele num: 14348
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.689e1

FS
type: SiteQuality
SIO_000300: 5.025e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.928e0

VQSLOD
type: SiteQuality
SIO_000300: -5.851e-1

DP
type: SiteQuality
SIO_000300: 1.390657e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 2272
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variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1909
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.072008331036173e-4
allele num: 65298
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.397233477714126e-4
allele num: 14314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 7.235e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

DP
type: SiteQuality
SIO_000300: 1.392045e6

QD
type: SiteQuality
SIO_000300: 3.267e1

VQSLOD
type: SiteQuality
SIO_000300: -2.132e0

GenotypeQuality
all individuals: 1102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
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variant carriers: 0

GenotypeQuality
all individuals: 1895
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variant carriers: 0

GenotypeQuality
all individuals: 595
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GenotypeQuality
all individuals: 1232
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2249
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variant carriers: 0

GenotypeQuality
all individuals: 5466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.190613320262239e-5
allele num: 65284
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.42e-1

DP
type: SiteQuality
SIO_000300: 1.393429e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.564e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.341e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 2426
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30656
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
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variant carriers: 0

GenotypeQuality
all individuals: 1953
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variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 603
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variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.204995244085791e-5
allele num: 65182
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.625e0

DP
type: SiteQuality
SIO_000300: 1.402543e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 7.669e0

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeQuality
all individuals: 4111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
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GenotypeQuality
all individuals: 669
bin: 2.75e1
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GenotypeQuality
all individuals: 3221
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GenotypeQuality
all individuals: 15833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13919
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 7597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4723
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.822600243013366e-4
allele num: 65840
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

DP
type: SiteQuality
SIO_000300: 2.08339e6

FS
type: SiteQuality
SIO_000300: 7.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3232
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 93
bin: 7.5e0
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GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13934
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 711
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17249
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65934
num of homozygotes: 0

South Asian
type: Population
allele count: 48
allele frequency: 3.344015605406158e-3
allele num: 14354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.090868e6

VQSLOD
type: SiteQuality
SIO_000300: 4.79e0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

QD
type: SiteQuality
SIO_000300: 1.312e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.031e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513546238837597e-5
allele num: 66070
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.904e1

DP
type: SiteQuality
SIO_000300: 2.103935e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.217e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510847887834653e-5
allele num: 66188
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15168
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.108e1

DP
type: SiteQuality
SIO_000300: 2.117003e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 8.149999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

FS
type: SiteQuality
SIO_000300: 3.524e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312673450508788e-4
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.637130801687763e-4
allele num: 15168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.117003e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

FS
type: SiteQuality
SIO_000300: 3.524e0

VQSLOD
type: SiteQuality
SIO_000300: 8.149999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509753004408479e-5
allele num: 66236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.350000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 8.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 2.118943e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002371873780286e-5
allele num: 66614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

FS
type: SiteQuality
SIO_000300: 1.052e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.501e0

DP
type: SiteQuality
SIO_000300: 2.142429e6

QD
type: SiteQuality
SIO_000300: 1.134e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003482019571351e-5
allele num: 66628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.103e1

DP
type: SiteQuality
SIO_000300: 2.14312e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 1.748e0

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.13e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.047e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 3.358e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

South Asian
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allele count: 0
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MQRankSum
type: SiteQuality
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VQSLOD
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3099
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.145973e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8065
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.412e1

DP
type: SiteQuality
SIO_000300: 2.145973e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.145999e6

VQSLOD
type: SiteQuality
SIO_000300: -7.304e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.178e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.42e-1

QD
type: SiteQuality
SIO_000300: 1.694e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2020
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998860433035446e-5
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.118e0

QD
type: SiteQuality
SIO_000300: 1.13e1

FS
type: SiteQuality
SIO_000300: 1.3411e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.407e0

DP
type: SiteQuality
SIO_000300: 2.146143e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 4751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

FS
type: SiteQuality
SIO_000300: 1.104e0

DP
type: SiteQuality
SIO_000300: 2.146608e6

QD
type: SiteQuality
SIO_000300: 1.265e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.706e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4107
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.706e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

DP
type: SiteQuality
SIO_000300: 2.146608e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.624e0

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 2.146636e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.89e-1

QD
type: SiteQuality
SIO_000300: 1.008e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8080
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.125e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

DP
type: SiteQuality
SIO_000300: 2.146697e6

QD
type: SiteQuality
SIO_000300: 1.581e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1276

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 4069
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 88
allele frequency: 1.33091349062311e-2
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 2.979050547760907e-3
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 109
allele frequency: 9.416033172080165e-3
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 960
allele frequency: 1.438547067461863e-2
allele num: 66734
num of homozygotes: 6

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 84
allele frequency: 5.087209302325582e-3
allele num: 16512
num of homozygotes: 1

Other
type: Population
allele count: 9
allele frequency: 9.911894273127754e-3
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 2.194076e6

VQSLOD
type: SiteQuality
SIO_000300: 6.29e0

GenotypeQuality
all individuals: 8221
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3124
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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DP
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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Latino
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East Asian
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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South Asian
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East Asian
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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Latino
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East Asian
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African
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European (Non-Finnish)
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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African
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South Asian
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
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FS
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MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e0

DP
type: SiteQuality
SIO_000300: 2.125989e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.752e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.123e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 2.125989e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 9
allele frequency: 7.774706288873532e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
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VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
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SIO_000300: 2.126025e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.86e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.66e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 2.125589e6

FS
type: SiteQuality
SIO_000300: 6.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 4.952e1

VQSLOD
type: SiteQuality
SIO_000300: -9.106e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.683e0

QD
type: SiteQuality
SIO_000300: 1.238e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.146821710072827e-4
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.126485e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.799e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

FS
type: SiteQuality
SIO_000300: 1.731e0

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.124864e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.609e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.261e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.63e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
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African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.54e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.26e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.73e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 2.124486e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.124295e6

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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FS
type: SiteQuality
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VQSLOD
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QD
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DP
type: SiteQuality
SIO_000300: 2.12363e6

MQRankSum
type: SiteQuality
SIO_000300: -1.604e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.313e0