14-91007653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007653
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007653
    reference: chr 14
allele count: 1
allele frequency: 6.218905472636816e-5
allele num: 16080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.615G>A
  hgvsp: ENST00000555894.1:c.615G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*59G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*59G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1180G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*59G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*755G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg205Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

14-91007659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007659
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007659
    reference: chr 14
allele count: 72
allele frequency: 3.906673901247965e-3
allele num: 18430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*53C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*53C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*749C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*53C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.609C>T
  hgvsp: ENST00000555894.1:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1174C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15758
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34332
  bin: 7.5e0
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 1.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30960
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14883
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly203Gly
num of homozygotes: 5
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-91007660-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007660
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007660
    reference: chr 14
allele count: 3
allele frequency: 1.602050624799744e-4
allele num: 18726
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*52G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.608G>C
  hgvsp: ENSP00000452594.1:p.Gly203Ala
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*52G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1173G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*748G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*52G>C
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14558
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly203Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

14-91007662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007662
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007662
    reference: chr 14
allele count: 3
allele frequency: 1.507537688442211e-4
allele num: 19900
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*50G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*50G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1171G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*50G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*746G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.606G>A
  hgvsp: ENST00000555894.1:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*50G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35239
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13509
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro202Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP

14-91007663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007663
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007663
    reference: chr 14
allele count: 2
allele frequency: 9.463423866754992e-5
allele num: 21134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*49C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*49C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.605C>T
  hgvsp: ENSP00000452594.1:p.Pro202Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1170C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*745C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12664
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro202Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-91007667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007667
    reference: chr 14
allele count: 4
allele frequency: 1.631853785900783e-4
allele num: 24512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*45C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1166C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*741C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.601C>T
  hgvsp: ENST00000555894.1:c.601C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*45C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35274
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu201Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

14-91007677-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007677
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007677
    reference: chr 14
allele count: 166
allele frequency: 5.121243906953786e-3
allele num: 32414
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*35C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.591C>A
  hgvsp: ENST00000555894.1:c.591C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*35C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*731C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1156C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*35C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*35C>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36252
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.75e1
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 36369
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7690
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.75e1
  variant carriers: 1
hgvs: p.Ala197Ala
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

14-91007678-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007678
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007678
    reference: chr 14
allele count: 9
allele frequency: 2.696225284601558e-4
allele num: 33380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*34C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*730C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*34C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*34C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.590C>G
  hgvsp: ENSP00000452594.1:p.Ala197Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*34C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1155C>G
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 36091
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7126
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Ala197Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

14-91007686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007686
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 37034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1147C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*26C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*26C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*722C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.582C>T
  hgvsp: ENST00000555894.1:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31272
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30776
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala194Ala
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

14-91007687-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007687
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 38578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1146C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*25C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*721C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*25C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*25C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.581C>G
  hgvsp: ENSP00000452594.1:p.Ala194Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*25C>G
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31229
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala194Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

14-91007691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007691
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007691
    reference: chr 14
allele count: 1
allele frequency: 2.435816242022702e-5
allele num: 41054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1142C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*717C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.577C>T
  hgvsp: ENSP00000452594.1:p.Pro193Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*21C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29175
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro193Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

14-91007692-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007692
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007692
    reference: chr 14
allele count: 108
allele frequency: 3.027075508716856e-3
allele num: 35678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*716A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*20A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*20A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*20A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.576A>C
  hgvsp: ENST00000555894.1:c.576A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1141A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*20A>C
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 28548
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5723
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11447
  bin: 1.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 24125
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 1.25e1
  variant carriers: 4
hgvs: p.Ser192Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

14-91007694-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007694
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007694
    reference: chr 14
allele count: 2
allele frequency: 5.226845076311938e-5
allele num: 38264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*18T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*18T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.574T>C
  hgvsp: ENSP00000452594.1:p.Ser192Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*714T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*18T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1139T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*18T>C
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25787
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4543
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser192Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

14-91007700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007700
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007700
    reference: chr 14
allele count: 3
allele frequency: 6.625734352224038e-5
allele num: 45278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.568C>T
  hgvsp: ENSP00000452594.1:p.Pro190Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1133C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*12C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*708C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24964
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10834
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro190Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

14-91007703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007703
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007703
    reference: chr 14
allele count: 2
allele frequency: 4.090481449666626e-5
allele num: 48894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*9C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.565C>T
  hgvsp: ENST00000555894.1:c.565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*9C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*705C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1130C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12716
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10053
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu189Leu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

14-91007705-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007705
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007705
    reference: chr 14
allele count: 3
allele frequency: 6.988445769660827e-5
allele num: 42928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*703G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*7G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.563G>C
  hgvsp: ENSP00000452594.1:p.Arg188Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*7G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1128G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*7G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*7G>C
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12668
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27289
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25508
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4990
  bin: 2.5e0
  variant carriers: 2
hgvs: p.Arg188Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-91007705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007705
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007705
    reference: chr 14
allele count: 1
allele frequency: 2.329481923220276e-5
allele num: 42928
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*703G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*7G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.563G>A
  hgvsp: ENSP00000452594.1:p.Arg188His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1128G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*7G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*7G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*7G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12668
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4990
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25508
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8985
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5489
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg188His
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

14-91007706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007706
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007706
    reference: chr 14
allele count: 8
allele frequency: 1.526484506182262e-4
allele num: 52408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1127C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*6C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*702C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.562C>T
  hgvsp: ENSP00000452594.1:p.Arg188Cys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*6C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26729
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12773
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg188Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

14-91007707-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007707
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007707
    reference: chr 14
allele count: 2
allele frequency: 3.740275284260922e-5
allele num: 53472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*701G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1126G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*5G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*5G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*5G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.561G>A
  hgvsp: ENST00000555894.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*5G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12697
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29019
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg187Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

14-91007710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007710
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007710
    reference: chr 14
allele count: 225
allele frequency: 3.940041326655693e-3
allele num: 57106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.558C>T
  hgvsp: ENST00000555894.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*698C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1123C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.*2C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.*2C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.*2C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.*2C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11588
  bin: 2.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 26217
  bin: 7.5e0
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 1.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 1.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 9.75e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5127
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.25e1
  variant carriers: 3
hgvs: p.Ser186Ser
num of homozygotes: 2
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-91007716-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007716
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007716
    reference: chr 14
allele count: 1
allele frequency: 1.51290508033526e-5
allele num: 66098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1117T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.552T>C
  hgvsp: ENST00000555894.1:c.552T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2528T>C
  hgvsp: ENSP00000336127.4:p.Leu843Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.989T>C
  hgvsp: ENSP00000451440.1:p.Leu330Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.810T>C
  hgvsp: ENSP00000452031.1:p.Leu271Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*692T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2579T>C
  hgvsp: ENSP00000349564.2:p.Leu860Pro
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu843Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-91007719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007719
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007719
    reference: chr 14
allele count: 1
allele frequency: 1.438062642008686e-5
allele num: 69538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*689T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2525T>C
  hgvsp: ENSP00000336127.4:p.Val842Ala
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.807T>C
  hgvsp: ENSP00000452031.1:p.Val270Ala
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.986T>C
  hgvsp: ENSP00000451440.1:p.Val329Ala
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.549T>C
  hgvsp: ENST00000555894.1:c.549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2576T>C
  hgvsp: ENSP00000349564.2:p.Val859Ala
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1114T>C
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val842Ala
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

14-91007721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007721
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007721
    reference: chr 14
allele count: 6
allele frequency: 8.189337482597658e-5
allele num: 73266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.984C>T
  hgvsp: ENST00000553972.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.547C>T
  hgvsp: ENSP00000452594.1:p.Arg183Cys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1112C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*687C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2574C>T
  hgvsp: ENST00000357056.2:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2523C>T
  hgvsp: ENST00000328459.6:c.2523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.805C>T
  hgvsp: ENST00000557292.1:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24414
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg183Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

14-91007721-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007721
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007721
    reference: chr 14
allele count: 1
allele frequency: 1.364889580432943e-5
allele num: 73266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.805C>A
  hgvsp: ENST00000557292.1:c.805C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.984C>A
  hgvsp: ENST00000553972.1:c.984C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2523C>A
  hgvsp: ENST00000328459.6:c.2523C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.547C>A
  hgvsp: ENSP00000452594.1:p.Arg183Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1112C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2574C>A
  hgvsp: ENST00000357056.2:c.2574C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*687C>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg183Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/14-91007722-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007722
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007722
    reference: chr 14
allele count: 1
allele frequency: 1.333866880085368e-5
allele num: 74970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.983G>T
  hgvsp: ENSP00000451440.1:p.Arg328Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1111G>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.546G>T
  hgvsp: ENST00000555894.1:c.546G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2522G>T
  hgvsp: ENSP00000336127.4:p.Arg841Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2573G>T
  hgvsp: ENSP00000349564.2:p.Arg858Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.804G>T
  hgvsp: ENSP00000452031.1:p.Arg269Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*686G>T
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg841Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

14-91007722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007722
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007722
    reference: chr 14
allele count: 1
allele frequency: 1.333866880085368e-5
allele num: 74970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.983G>A
  hgvsp: ENSP00000451440.1:p.Arg328His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2573G>A
  hgvsp: ENSP00000349564.2:p.Arg858His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2522G>A
  hgvsp: ENSP00000336127.4:p.Arg841His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*686G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.804G>A
  hgvsp: ENSP00000452031.1:p.Arg269His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.546G>A
  hgvsp: ENST00000555894.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1111G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25488
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg841His
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

14-91007730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007730
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007730
    reference: chr 14
allele count: 1
allele frequency: 1.133401337413578e-5
allele num: 88230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.975C>T
  hgvsp: ENST00000553972.1:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*678C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2565C>T
  hgvsp: ENST00000357056.2:c.2565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.538C>T
  hgvsp: ENSP00000452594.1:p.His180Tyr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2514C>T
  hgvsp: ENST00000328459.6:c.2514C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.796C>T
  hgvsp: ENST00000557292.1:c.796C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1103C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His180Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

14-91007734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007734
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007734
    reference: chr 14
allele count: 1
allele frequency: 1.094067963501893e-5
allele num: 91402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2510C>T
  hgvsp: ENSP00000336127.4:p.Thr837Ile
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1099C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*674C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.792C>T
  hgvsp: ENSP00000452031.1:p.Thr265Ile
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.971C>T
  hgvsp: ENSP00000451440.1:p.Thr324Ile
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2561C>T
  hgvsp: ENSP00000349564.2:p.Thr854Ile
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.534C>T
  hgvsp: ENST00000555894.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14769
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr837Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-91007744-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007744
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007744
    reference: chr 14
allele count: 1
allele frequency: 1.074229240519927e-5
allele num: 93090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.961G>C
  hgvsp: ENSP00000451440.1:p.Val321Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.524G>C
  hgvsp: ENSP00000452594.1:p.Arg175Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*664G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.782G>C
  hgvsp: ENSP00000452031.1:p.Val262Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2500G>C
  hgvsp: ENSP00000336127.4:p.Val834Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1089G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2551G>C
  hgvsp: ENSP00000349564.2:p.Val851Leu
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4009
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18032
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12892
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val834Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ

14-91007744-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007744
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007744
    reference: chr 14
allele count: 1
allele frequency: 1.074229240519927e-5
allele num: 93090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.782G>A
  hgvsp: ENSP00000452031.1:p.Val262Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2500G>A
  hgvsp: ENSP00000336127.4:p.Val834Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.961G>A
  hgvsp: ENSP00000451440.1:p.Val321Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1089G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.524G>A
  hgvsp: ENSP00000452594.1:p.Arg175His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2551G>A
  hgvsp: ENSP00000349564.2:p.Val851Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*664G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18032
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12892
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val834Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-91007748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007748
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007748
    reference: chr 14
allele count: 2
allele frequency: 2.100046201016423e-5
allele num: 95236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2547C>T
  hgvsp: ENST00000357056.2:c.2547C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.520C>T
  hgvsp: ENSP00000452594.1:p.Arg174Cys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2496C>T
  hgvsp: ENST00000328459.6:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*660C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.957C>T
  hgvsp: ENST00000553972.1:c.957C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1085C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.778C>T
  hgvsp: ENST00000557292.1:c.778C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13469
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg174Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

14-91007748-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007748
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007748
    reference: chr 14
allele count: 4
allele frequency: 4.200092402032845e-5
allele num: 95236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.778C>A
  hgvsp: ENST00000557292.1:c.778C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.520C>A
  hgvsp: ENSP00000452594.1:p.Arg174Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.957C>A
  hgvsp: ENST00000553972.1:c.957C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1085C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2496C>A
  hgvsp: ENST00000328459.6:c.2496C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2547C>A
  hgvsp: ENST00000357056.2:c.2547C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*660C>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg174Ser
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

14-91007758-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007758
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007758
    reference: chr 14
allele count: 1
allele frequency: 1.012842847303812e-5
allele num: 98732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2537C>G
  hgvsp: ENSP00000349564.2:p.Ala846Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2486C>G
  hgvsp: ENSP00000336127.4:p.Ala829Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.947C>G
  hgvsp: ENSP00000451440.1:p.Ala316Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.510C>G
  hgvsp: ENST00000555894.1:c.510C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.768C>G
  hgvsp: ENSP00000452031.1:p.Ala257Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*650C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1075C>G
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala829Gly
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

14-91007759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007759
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007759
    reference: chr 14
allele count: 1
allele frequency: 1.013294422827497e-5
allele num: 98688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1074G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2536G>A
  hgvsp: ENSP00000349564.2:p.Ala846Thr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.767G>A
  hgvsp: ENSP00000452031.1:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2485G>A
  hgvsp: ENSP00000336127.4:p.Ala829Thr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.509G>A
  hgvsp: ENSP00000452594.1:p.Gly170Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*649G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.946G>A
  hgvsp: ENSP00000451440.1:p.Ala316Thr
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala829Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

14-91007760-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007760
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007760
    reference: chr 14
allele count: 13
allele frequency: 1.303153631788929e-4
allele num: 99758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.945G>A
  hgvsp: ENST00000553972.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2535G>A
  hgvsp: ENST00000357056.2:c.2535G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2484G>A
  hgvsp: ENST00000328459.6:c.2484G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.766G>A
  hgvsp: ENST00000557292.1:c.766G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.508G>A
  hgvsp: ENSP00000452594.1:p.Gly170Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*648G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1073G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26814
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9051
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly170Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

14-91007772-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007772
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007772
    reference: chr 14
allele count: 1
allele frequency: 9.541802637354249e-6
allele num: 104802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*636C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2523C>G
  hgvsp: ENST00000357056.2:c.2523C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.933C>G
  hgvsp: ENST00000553972.1:c.933C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.754C>G
  hgvsp: ENST00000557292.1:c.754C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.496C>G
  hgvsp: ENSP00000452594.1:p.Leu166Val
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1061C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2472C>G
  hgvsp: ENST00000328459.6:c.2472C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7404
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu166Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

14-91007780-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007780
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007780
    reference: chr 14
allele count: 2
allele frequency: 1.85013876040703e-5
allele num: 108100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2515C>A
  hgvsp: ENSP00000349564.2:p.Leu839Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.925C>A
  hgvsp: ENSP00000451440.1:p.Leu309Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1053C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.488C>A
  hgvsp: ENSP00000452594.1:p.Pro163His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.746C>A
  hgvsp: ENSP00000452031.1:p.Leu250Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*628C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2464C>A
  hgvsp: ENSP00000336127.4:p.Leu822Met
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7588
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu822Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-91007783-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007783
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007783
    reference: chr 14
allele count: 2
allele frequency: 1.837289630337326e-5
allele num: 108856
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2461T>C
  hgvsp: ENSP00000336127.4:p.Phe821Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.485T>C
  hgvsp: ENSP00000452594.1:p.Leu162Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.922T>C
  hgvsp: ENSP00000451440.1:p.Phe308Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1050T>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.743T>C
  hgvsp: ENSP00000452031.1:p.Phe249Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2512T>C
  hgvsp: ENSP00000349564.2:p.Phe838Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*625T>C
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe821Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

14-91007788-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007788
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007788
    reference: chr 14
allele count: 1
allele frequency: 9.069636670354985e-6
allele num: 110258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2507A>G
  hgvsp: ENSP00000349564.2:p.Glu836Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.480A>G
  hgvsp: ENST00000555894.1:c.480A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.917A>G
  hgvsp: ENSP00000451440.1:p.Glu306Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2456A>G
  hgvsp: ENSP00000336127.4:p.Glu819Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1045A>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.738A>G
  hgvsp: ENSP00000452031.1:p.Glu247Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*620A>G
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6135
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu819Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

14-91007790-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007790
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007790
    reference: chr 14
allele count: 7
allele frequency: 6.319856990664668e-5
allele num: 110762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*618G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.736G>A
  hgvsp: ENST00000557292.1:c.736G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1043G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2454G>A
  hgvsp: ENST00000328459.6:c.2454G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2505G>A
  hgvsp: ENST00000357056.2:c.2505G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.915G>A
  hgvsp: ENST00000553972.1:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.478G>A
  hgvsp: ENSP00000452594.1:p.Gly160Arg
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14035
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42534
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly160Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

14-91007791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007791
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007791
    reference: chr 14
allele count: 1
allele frequency: 8.962661551974475e-6
allele num: 111574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1042C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*617C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2504C>T
  hgvsp: ENSP00000349564.2:p.Thr835Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.735C>T
  hgvsp: ENSP00000452031.1:p.Thr246Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.914C>T
  hgvsp: ENSP00000451440.1:p.Thr305Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.477C>T
  hgvsp: ENST00000555894.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2453C>T
  hgvsp: ENSP00000336127.4:p.Thr818Met
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5362
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr818Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-91007796-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007796
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007796
    reference: chr 14
allele count: 7
allele frequency: 6.141751627564181e-5
allele num: 113974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*612G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2499G>A
  hgvsp: ENST00000357056.2:c.2499G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1037G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.472G>A
  hgvsp: ENSP00000452594.1:p.Gly158Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.730G>A
  hgvsp: ENST00000557292.1:c.730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2448G>A
  hgvsp: ENST00000328459.6:c.2448G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.909G>A
  hgvsp: ENST00000553972.1:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35695
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly158Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

14-91007799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007799
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007799
    reference: chr 14
allele count: 3
allele frequency: 2.602630391782628e-5
allele num: 115268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.727G>A
  hgvsp: ENST00000557292.1:c.727G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.906G>A
  hgvsp: ENST00000553972.1:c.906G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2496G>A
  hgvsp: ENST00000357056.2:c.2496G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.469G>A
  hgvsp: ENSP00000452594.1:p.Gly157Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*609G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2445G>A
  hgvsp: ENST00000328459.6:c.2445G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1034G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly157Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

14-91007800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007800
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007800
    reference: chr 14
allele count: 1
allele frequency: 8.645134518293105e-6
allele num: 115672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2495C>T
  hgvsp: ENSP00000349564.2:p.Ala832Val
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.468C>T
  hgvsp: ENST00000555894.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.905C>T
  hgvsp: ENSP00000451440.1:p.Ala302Val
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2444C>T
  hgvsp: ENSP00000336127.4:p.Ala815Val
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.726C>T
  hgvsp: ENSP00000452031.1:p.Ala243Val
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*608C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1033C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala815Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

14-91007805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007805
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007805
    reference: chr 14
allele count: 4
allele frequency: 3.417810208999094e-5
allele num: 117034
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2439C>T
  hgvsp: ENST00000328459.6:c.2439C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*603C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1028C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.463C>T
  hgvsp: ENSP00000452594.1:p.Arg155Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2490C>T
  hgvsp: ENST00000357056.2:c.2490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.900C>T
  hgvsp: ENST00000553972.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.721C>T
  hgvsp: ENST00000557292.1:c.721C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37633
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50339
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4341
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg155Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

14-91007809-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007809
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007809
    reference: chr 14
allele count: 2
allele frequency: 1.69943748619207e-5
allele num: 117686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.717G>A
  hgvsp: ENSP00000452031.1:p.Gly240Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.459G>A
  hgvsp: ENST00000555894.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1024G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2486G>A
  hgvsp: ENSP00000349564.2:p.Gly829Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.896G>A
  hgvsp: ENSP00000451440.1:p.Gly299Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2435G>A
  hgvsp: ENSP00000336127.4:p.Gly812Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*599G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly812Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

14-91007823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007823
    reference: chr 14
allele count: 1
allele frequency: 8.442950980226608e-6
allele num: 118442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*585C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.882C>T
  hgvsp: ENST00000553972.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.445C>T
  hgvsp: ENSP00000452594.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2472C>T
  hgvsp: ENST00000357056.2:c.2472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1010C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2421C>T
  hgvsp: ENST00000328459.6:c.2421C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.703C>T
  hgvsp: ENST00000557292.1:c.703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro149Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/14-91007828-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007828
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007828
    reference: chr 14
allele count: 1
allele frequency: 8.432698632216282e-6
allele num: 118586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.877G>T
  hgvsp: ENSP00000451440.1:p.Glu293Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.698G>T
  hgvsp: ENSP00000452031.1:p.Glu234Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.440G>T
  hgvsp: ENSP00000452594.1:p.Arg147Leu
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2416G>T
  hgvsp: ENSP00000336127.4:p.Glu806Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*580G>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1005G>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2467G>T
  hgvsp: ENSP00000349564.2:p.Glu823Ter
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu806Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

14-91007828-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007828
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007828
    reference: chr 14
allele count: 37
allele frequency: 3.120098493920025e-4
allele num: 118586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1005G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2467G>A
  hgvsp: ENSP00000349564.2:p.Glu823Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.440G>A
  hgvsp: ENSP00000452594.1:p.Arg147Gln
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*580G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.877G>A
  hgvsp: ENSP00000451440.1:p.Glu293Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2416G>A
  hgvsp: ENSP00000336127.4:p.Glu806Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.698G>A
  hgvsp: ENSP00000452031.1:p.Glu234Lys
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37807
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17211
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 9.75e1
  variant carriers: 37
hgvs: p.Glu806Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-91007829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007829
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007829
    reference: chr 14
allele count: 8
allele frequency: 6.7425200168563e-5
allele num: 118650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.876C>T
  hgvsp: ENST00000553972.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2466C>T
  hgvsp: ENST00000357056.2:c.2466C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1004C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.439C>T
  hgvsp: ENSP00000452594.1:p.Arg147Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.697C>T
  hgvsp: ENST00000557292.1:c.697C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2415C>T
  hgvsp: ENST00000328459.6:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*579C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg147Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

14-91007829-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007829
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007829
    reference: chr 14
allele count: 7
allele frequency: 5.899705014749263e-5
allele num: 118650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*579C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.439C>A
  hgvsp: ENST00000555894.1:c.439C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.876C>A
  hgvsp: ENST00000553972.1:c.876C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2466C>A
  hgvsp: ENST00000357056.2:c.2466C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1004C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.697C>A
  hgvsp: ENST00000557292.1:c.697C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2415C>A
  hgvsp: ENST00000328459.6:c.2415C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37795
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly805Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-91007832-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007832
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007832
    reference: chr 14
allele count: 1
allele frequency: 8.416799932665601e-6
allele num: 118810
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2412G>A
  hgvsp: ENST00000328459.6:c.2412G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2463G>A
  hgvsp: ENST00000357056.2:c.2463G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.694G>A
  hgvsp: ENST00000557292.1:c.694G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.436G>A
  hgvsp: ENSP00000452594.1:p.Gly146Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.1001G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*576G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.873G>A
  hgvsp: ENST00000553972.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly146Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

14-91007837-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007837
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007837
    reference: chr 14
allele count: 2
allele frequency: 1.680672268907563e-5
allele num: 119000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.868G>C
  hgvsp: ENSP00000451440.1:p.Gly290Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2407G>C
  hgvsp: ENSP00000336127.4:p.Gly803Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.431G>C
  hgvsp: ENSP00000452594.1:p.Arg144Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.689G>C
  hgvsp: ENSP00000452031.1:p.Gly231Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*571G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2458G>C
  hgvsp: ENSP00000349564.2:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.996G>C
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4530
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly803Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

14-91007838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007838
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007838
    reference: chr 14
allele count: 26
allele frequency: 2.183406113537118e-4
allele num: 119080
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2406C>T
  hgvsp: ENST00000328459.6:c.2406C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.995C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.688C>T
  hgvsp: ENST00000557292.1:c.688C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.430C>T
  hgvsp: ENSP00000452594.1:p.Arg144Trp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2457C>T
  hgvsp: ENST00000357056.2:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.867C>T
  hgvsp: ENST00000553972.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*570C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37825
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17517
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg144Trp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

14-91007838-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007838
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007838
    reference: chr 14
allele count: 1
allele frequency: 8.397715821296607e-6
allele num: 119080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.867C>G
  hgvsp: ENSP00000451440.1:p.Asn289Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2406C>G
  hgvsp: ENSP00000336127.4:p.Asn802Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.995C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.430C>G
  hgvsp: ENSP00000452594.1:p.Arg144Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2457C>G
  hgvsp: ENSP00000349564.2:p.Asn819Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*570C>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.688C>G
  hgvsp: ENSP00000452031.1:p.Asn230Lys
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn802Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-91007840-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007840
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007840
    reference: chr 14
allele count: 4
allele frequency: 3.358409457281032e-5
allele num: 119104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.686A>G
  hgvsp: ENSP00000452031.1:p.Asn230Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.428A>G
  hgvsp: ENSP00000452594.1:p.Glu143Gly
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2404A>G
  hgvsp: ENSP00000336127.4:p.Asn802Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.993A>G
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.865A>G
  hgvsp: ENSP00000451440.1:p.Asn289Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2455A>G
  hgvsp: ENSP00000349564.2:p.Asn819Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*568A>G
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17556
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn802Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

14-91007847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007847
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007847
    reference: chr 14
allele count: 1
allele frequency: 8.390387971539804e-6
allele num: 119184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.679G>A
  hgvsp: ENST00000557292.1:c.679G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2397G>A
  hgvsp: ENST00000328459.6:c.2397G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.986G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.421G>A
  hgvsp: ENSP00000452594.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.858G>A
  hgvsp: ENST00000553972.1:c.858G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*561G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2448G>A
  hgvsp: ENST00000357056.2:c.2448G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly141Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum

14-91007850-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007850
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007850
    reference: chr 14
allele count: 3
allele frequency: 2.517369851978653e-5
allele num: 119172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.676C>T
  hgvsp: ENST00000557292.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2445C>T
  hgvsp: ENST00000357056.2:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.418C>T
  hgvsp: ENSP00000452594.1:p.Arg140Ter
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2394C>T
  hgvsp: ENST00000328459.6:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.855C>T
  hgvsp: ENST00000553972.1:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.983C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*558C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg140Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

14-91007856-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007856
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007856
    reference: chr 14
allele count: 1
allele frequency: 8.392359595823962e-6
allele num: 119156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.977A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.670A>C
  hgvsp: ENST00000557292.1:c.670A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.849A>C
  hgvsp: ENST00000553972.1:c.849A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2388A>C
  hgvsp: ENST00000328459.6:c.2388A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*552A>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.412A>C
  hgvsp: ENSP00000452594.1:p.Ser138Arg
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2439A>C
  hgvsp: ENST00000357056.2:c.2439A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser138Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-91007859-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
allele count: 5
allele frequency: 4.201115816360826e-5
allele num: 119016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.974G>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2385G>T
  hgvsp: ENST00000328459.6:c.2385G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2436G>T
  hgvsp: ENST00000357056.2:c.2436G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.667G>T
  hgvsp: ENST00000557292.1:c.667G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.846G>T
  hgvsp: ENST00000553972.1:c.846G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.409G>T
  hgvsp: ENSP00000452594.1:p.Asp137Tyr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*549G>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp137Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

14-91007859-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
allele count: 6
allele frequency: 5.04133897963299e-5
allele num: 119016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.974G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*549G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.409G>C
  hgvsp: ENSP00000452594.1:p.Asp137His
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2385G>C
  hgvsp: ENST00000328459.6:c.2385G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.846G>C
  hgvsp: ENST00000553972.1:c.846G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.667G>C
  hgvsp: ENST00000557292.1:c.667G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2436G>C
  hgvsp: ENST00000357056.2:c.2436G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp137His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-91007859-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007859
    reference: chr 14
allele count: 3
allele frequency: 2.520669489816495e-5
allele num: 119016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.409G>A
  hgvsp: ENSP00000452594.1:p.Asp137Asn
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.667G>A
  hgvsp: ENST00000557292.1:c.667G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2385G>A
  hgvsp: ENST00000328459.6:c.2385G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2436G>A
  hgvsp: ENST00000357056.2:c.2436G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.846G>A
  hgvsp: ENST00000553972.1:c.846G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.974G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*549G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp137Asn
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

14-91007862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007862
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007862
    reference: chr 14
allele count: 8
allele frequency: 6.723480073285933e-5
allele num: 118986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2433C>T
  hgvsp: ENST00000357056.2:c.2433C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.406C>T
  hgvsp: ENSP00000452594.1:p.Leu136Phe
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2382C>T
  hgvsp: ENST00000328459.6:c.2382C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.843C>T
  hgvsp: ENST00000553972.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.971C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*546C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.664C>T
  hgvsp: ENST00000557292.1:c.664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51587
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu136Phe
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

14-91007865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007865
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007865
    reference: chr 14
allele count: 1
allele frequency: 8.418783990840363e-6
allele num: 118782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.403G>A
  hgvsp: ENSP00000452594.1:p.Glu135Lys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2379G>A
  hgvsp: ENST00000328459.6:c.2379G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.840G>A
  hgvsp: ENST00000553972.1:c.840G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2430G>A
  hgvsp: ENST00000357056.2:c.2430G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.968G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*543G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.661G>A
  hgvsp: ENST00000557292.1:c.661G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51057
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu135Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-91007867-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007867
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007867
    reference: chr 14
allele count: 1
allele frequency: 8.431561019207096e-6
allele num: 118602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*541G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.838G>A
  hgvsp: ENSP00000451440.1:p.Val280Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.659G>A
  hgvsp: ENSP00000452031.1:p.Val221Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2377G>A
  hgvsp: ENSP00000336127.4:p.Val793Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.401G>A
  hgvsp: ENSP00000452594.1:p.Gly134Asp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2428G>A
  hgvsp: ENSP00000349564.2:p.Val810Met
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.966G>A
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4470
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val793Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

14-91007874-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007874
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007874
    reference: chr 14
allele count: 59
allele frequency: 5.000169497271094e-4
allele num: 117996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.394G>A
  hgvsp: ENSP00000452594.1:p.Gly132Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2421G>A
  hgvsp: ENST00000357056.2:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.652G>A
  hgvsp: ENST00000557292.1:c.652G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*534G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.831G>A
  hgvsp: ENST00000553972.1:c.831G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.959G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2370G>A
  hgvsp: ENST00000328459.6:c.2370G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35689
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 17263
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 49261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly132Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-91007877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007877
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007877
    reference: chr 14
allele count: 3
allele frequency: 2.547338031756814e-5
allele num: 117770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2418C>T
  hgvsp: ENST00000357056.2:c.2418C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.649C>T
  hgvsp: ENST00000557292.1:c.649C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.391C>T
  hgvsp: ENSP00000452594.1:p.Arg131Cys
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*531C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2367C>T
  hgvsp: ENST00000328459.6:c.2367C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.828C>T
  hgvsp: ENST00000553972.1:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.956C>T
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35505
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg131Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

14-91007881-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007881
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007881
    reference: chr 14
allele count: 1
allele frequency: 8.509914049868097e-6
allele num: 117510
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.645G>C
  hgvsp: ENSP00000452031.1:p.Arg216Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.824G>C
  hgvsp: ENSP00000451440.1:p.Arg275Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.387G>C
  hgvsp: ENST00000555894.1:c.387G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2363G>C
  hgvsp: ENSP00000336127.4:p.Arg788Pro
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*527G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.952G>C
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2414G>C
  hgvsp: ENSP00000349564.2:p.Arg805Pro
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg788Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-91007881-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007881
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007881
    reference: chr 14
allele count: 2
allele frequency: 1.701982809973619e-5
allele num: 117510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.645G>A
  hgvsp: ENSP00000452031.1:p.Arg216Gln
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.824G>A
  hgvsp: ENSP00000451440.1:p.Arg275Gln
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2414G>A
  hgvsp: ENSP00000349564.2:p.Arg805Gln
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.387G>A
  hgvsp: ENST00000555894.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*527G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.952G>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2363G>A
  hgvsp: ENSP00000336127.4:p.Arg788Gln
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg788Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

14-91007882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007882
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007882
    reference: chr 14
allele count: 1
allele frequency: 8.515131388477325e-6
allele num: 117438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*526C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2362C>T
  hgvsp: ENSP00000336127.4:p.Arg788Trp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.951C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2413C>T
  hgvsp: ENSP00000349564.2:p.Arg805Trp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.823C>T
  hgvsp: ENSP00000451440.1:p.Arg275Trp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.644C>T
  hgvsp: ENSP00000452031.1:p.Arg216Trp
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.386C>T
  hgvsp: ENSP00000452594.1:p.Pro129Leu
  variant of: http://identifiers.org/hgnc/19858
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg788Trp
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-91007883-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007883
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007883
    reference: chr 14
allele count: 1
allele frequency: 8.518032675173342e-6
allele num: 117398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.643C>A
  hgvsp: ENST00000557292.1:c.643C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*525C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2361C>A
  hgvsp: ENST00000328459.6:c.2361C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.822C>A
  hgvsp: ENST00000553972.1:c.822C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.385C>A
  hgvsp: ENSP00000452594.1:p.Pro129Thr
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.950C>A
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2412C>A
  hgvsp: ENST00000357056.2:c.2412C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro129Thr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

14-91007883-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 91007883
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 91007883
    reference: chr 14
allele count: 1
allele frequency: 8.518032675173342e-6
allele num: 117398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452031
  ensembl transcript: ENST00000557292
  gene symbol: TTC7B
  hgvsc: ENST00000557292.1:c.643C>T
  hgvsp: ENST00000557292.1:c.643C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165914
  ensembl transcript: ENST00000554654
  gene symbol: TTC7B
  hgvsc: ENST00000554654.1:n.950C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451440
  ensembl transcript: ENST00000553972
  gene symbol: TTC7B
  hgvsc: ENST00000553972.1:c.822C>T
  hgvsp: ENST00000553972.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000452594
  ensembl transcript: ENST00000555894
  gene symbol: TTC7B
  hgvsc: ENST00000555894.1:c.385C>T
  hgvsp: ENSP00000452594.1:p.Pro129Ser
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000451825
  ensembl transcript: ENST00000555005
  gene symbol: TTC7B
  hgvsc: ENST00000555005.1:c.*525C>T
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000349564
  ensembl transcript: ENST00000357056
  gene symbol: TTC7B
  hgvsc: ENST00000357056.2:c.2412C>T
  hgvsp: ENST00000357056.2:c.2412C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165914
  ensembl protein: ENSP00000336127
  ensembl transcript: ENST00000328459
  gene symbol: TTC7B
  hgvsc: ENST00000328459.6:c.2361C>T
  hgvsp: ENST00000328459.6:c.2361C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19858
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35241
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Pro129Ser
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 17129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1676
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.073652566029633e-4
allele num: 9314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

DP
type: SiteQuality
SIO_000300: 4.12626e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.42e-2

QD
type: SiteQuality
SIO_000300: 1.621e1

GenotypeQuality
all individuals: 3161
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 105
bin: 9.75e1
variant carriers: 74

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2098
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 2.626148940161321e-3
allele num: 10662
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 5.186721991701245e-4
allele num: 1928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.19672131147541e-3
allele num: 122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 6.976744186046512e-2
allele num: 602
num of homozygotes: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2000
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.32e1

FS
type: SiteQuality
SIO_000300: 1.261e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.61e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.39458e5

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1940
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 2.764467379284925e-4
allele num: 10852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.51e1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 4.44754e5

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.02e-2

FS
type: SiteQuality
SIO_000300: 1.465e0

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 33349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.699248120300752e-4
allele num: 2128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.949447077409163e-4
allele num: 2532
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

QD
type: SiteQuality
SIO_000300: 1.325e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.91e-2

DP
type: SiteQuality
SIO_000300: 4.60514e5

GenotypeQuality
all individuals: 34478
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.177952240758914e-5
allele num: 12228
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.793626707132018e-4
allele num: 2636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.008e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.72415e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.404099971918001e-4
allele num: 14244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.712328767123288e-3
allele num: 1168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

QD
type: SiteQuality
SIO_000300: 1.343e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.03498e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.36e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 727
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 767
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2280
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 48
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 540
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6100
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1084
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 6.402793946449359e-3
allele num: 1718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3164
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.901960784313725e-3
allele num: 204
num of homozygotes: 0

African
type: Population
allele count: 125
allele frequency: 3.474152306837132e-2
allele num: 3598
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 2.641310089804543e-4
allele num: 3786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 1.484623541887593e-3
allele num: 18860
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

DP
type: SiteQuality
SIO_000300: 5.7884e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.98e0

GenotypeQuality
all individuals: 7454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3882
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 4.950495049504951e-3
allele num: 1818
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.87226e5

FS
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
all individuals: 2798
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8829
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5303
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 6.39713e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 1.388e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

QD
type: SiteQuality
SIO_000300: 1.024e1

GenotypeQuality
all individuals: 8912
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 316
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5851
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 966
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.487e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

QD
type: SiteQuality
SIO_000300: 8.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

DP
type: SiteQuality
SIO_000300: 6.45005e5

GenotypeQuality
all individuals: 2823
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10348
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1018
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.76243093922652e-4
allele num: 3620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24422
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.909e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.83e-2

MQ
type: SiteQuality
SIO_000300: 5.643e1

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.16e0

DP
type: SiteQuality
SIO_000300: 6.51701e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 5.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.309e0

GenotypeQuality
all individuals: 7690
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 684
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 4133
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 75
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 7977
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 2353
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 453
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2471
bin: 2.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 47
allele frequency: 2.179356394324399e-3
allele num: 21566
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 5.754475703324808e-3
allele num: 3128
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 9.647371922821025e-3
allele num: 3006
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 9.992006394884093e-4
allele num: 5004
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 2.9296875e-3
allele num: 2048
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.807692307692308e-3
allele num: 208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 2.785515320334262e-3
allele num: 718
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

FS
type: SiteQuality
SIO_000300: 1.23243e2

VQSLOD
type: SiteQuality
SIO_000300: -7.147e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.133e0

DP
type: SiteQuality
SIO_000300: 6.369e5

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.61e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.386e0

MQ
type: SiteQuality
SIO_000300: 5.625e1

GenotypeQuality
all individuals: 7924
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.347826086956522e-3
allele num: 230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.329754069968826e-5
allele num: 23096
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.751e1

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

QD
type: SiteQuality
SIO_000300: 8.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

FS
type: SiteQuality
SIO_000300: 5.3016e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.983e0

MQ
type: SiteQuality
SIO_000300: 4.789e1

DP
type: SiteQuality
SIO_000300: 6.39646e5

GenotypeQuality
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4365
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27008
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.192107995846313e-4
allele num: 3852
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.464268112370626e-4
allele num: 4058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.405e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.706e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

MQ
type: SiteQuality
SIO_000300: 5.829e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.52e-1

FS
type: SiteQuality
SIO_000300: 9.11e-1

QD
type: SiteQuality
SIO_000300: 3.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.749e0

DP
type: SiteQuality
SIO_000300: 6.32149e5

GenotypeQuality
all individuals: 2752
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4054
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.110419906687403e-4
allele num: 6430
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.37834e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 9.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

GenotypeQuality
all individuals: 73
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 360
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8985
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.777290926947193e-5
allele num: 26474
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.26592943654555e-4
allele num: 3798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 5.566e1

FS
type: SiteQuality
SIO_000300: 5.2204e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

DP
type: SiteQuality
SIO_000300: 6.34318e5

VQSLOD
type: SiteQuality
SIO_000300: -1.428e1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
all individuals: 2624
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.777290926947193e-5
allele num: 26474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.34318e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

MQ
type: SiteQuality
SIO_000300: 5.566e1

FS
type: SiteQuality
SIO_000300: 5.2204e1

QD
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.428e1

GenotypeQuality
all individuals: 1719
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 2.580811665268727e-4
allele num: 30998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4210
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.61729e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 2004
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 726
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6864
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.783964365256125e-4
allele num: 7184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1538
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.152e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.876e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

DP
type: SiteQuality
SIO_000300: 6.72561e5

FS
type: SiteQuality
SIO_000300: 1.462e0

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
all individuals: 29318
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 558
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1277
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 11733
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 89
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3309
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 5.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 3.279515640766902e-3
allele num: 3964
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.893070334804049e-4
allele num: 7706
num of homozygotes: 0

African
type: Population
allele count: 172
allele frequency: 3.481781376518218e-2
allele num: 4940
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1692
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 5.291005291005291e-3
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 1.032570214774605e-3
allele num: 33896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 4.272e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.366e1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

DP
type: SiteQuality
SIO_000300: 7.20412e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.547381292031791e-5
allele num: 39256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.20691e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

FS
type: SiteQuality
SIO_000300: 2.029e0

VQSLOD
type: SiteQuality
SIO_000300: 7.58e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.96e-1

GenotypeQuality
all individuals: 2101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5356
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.922337562475971e-4
allele num: 5202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41184
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.73e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 2.398e0

VQSLOD
type: SiteQuality
SIO_000300: -3.977e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

DP
type: SiteQuality
SIO_000300: 8.61752e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.26311889213098e-5
allele num: 43182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.5486160397445e-4
allele num: 5636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

FS
type: SiteQuality
SIO_000300: 8.473000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 9.0722e5

QD
type: SiteQuality
SIO_000300: 1.055e1

GenotypeQuality
all individuals: 389
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2457
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.315779723032745e-5
allele num: 43182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.473000000000001e0

QD
type: SiteQuality
SIO_000300: 1.055e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 9.0722e5

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

GenotypeQuality
all individuals: 22076
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2035
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.643115346697338e-4
allele num: 6086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.29034e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 275
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22076
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2035
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.270663033605813e-5
allele num: 44040
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 9.29034e5

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31499
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50836
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.470269354565475e-5
allele num: 11806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7674
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.138e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.828e1

QD
type: SiteQuality
SIO_000300: 1.07e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.949e0

DP
type: SiteQuality
SIO_000300: 1.055259e6

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 980
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.175277959450622e-5
allele num: 12232
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.039e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.636e1

DP
type: SiteQuality
SIO_000300: 1.083782e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.169e0

GenotypeQuality
all individuals: 2646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.892720596585532e-5
allele num: 52834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 1.126768e6

FS
type: SiteQuality
SIO_000300: 7.74e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

GenotypeQuality
all individuals: 4421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4009
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.892720596585532e-5
allele num: 52834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12698
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.126768e6

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 7.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.29e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
all individuals: 22491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.639419404125286e-5
allele num: 13090
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.428163381890888e-4
allele num: 7002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.023e0

MQ
type: SiteQuality
SIO_000300: 5.831e1

DP
type: SiteQuality
SIO_000300: 1.106982e6

FS
type: SiteQuality
SIO_000300: 4.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

QD
type: SiteQuality
SIO_000300: 1.066e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

GenotypeQuality
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13469
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 3
allele frequency: 3.836317135549872e-4
allele num: 7820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.855494118083646e-5
allele num: 53894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.831e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

VQSLOD
type: SiteQuality
SIO_000300: -2.023e0

QD
type: SiteQuality
SIO_000300: 1.066e1

DP
type: SiteQuality
SIO_000300: 1.106982e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

FS
type: SiteQuality
SIO_000300: 4.76e0

GenotypeQuality
all individuals: 346
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12615
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.237011380504701e-4
allele num: 8084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13932
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.116418e6

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.36e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

GenotypeQuality
all individuals: 2505
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.23334977799704e-4
allele num: 8108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55416
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.122437e6

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

QD
type: SiteQuality
SIO_000300: 1.405e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2959
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 808
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 9.219858156028368e-4
allele num: 14100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.232e1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 1.13146e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 3276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14828
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.675e-1

DP
type: SiteQuality
SIO_000300: 1.214807e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.889e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.38e-1

FS
type: SiteQuality
SIO_000300: 8.843e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 1.531e1

GenotypeQuality
all individuals: 1324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.263467632412856e-4
allele num: 8836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.009e0

QD
type: SiteQuality
SIO_000300: 1.307e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.32e-1

MQ
type: SiteQuality
SIO_000300: 5.691e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.229e0

DP
type: SiteQuality
SIO_000300: 1.261488e6

FS
type: SiteQuality
SIO_000300: 1.3045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

GenotypeQuality
all individuals: 533
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.308044473512099e-4
allele num: 15290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 8.430999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.285e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.271299e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.36e-1

QD
type: SiteQuality
SIO_000300: 1.158e1

GenotypeQuality
all individuals: 550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42386
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.645819618169848e-5
allele num: 60760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15464
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -3.171e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e0

DP
type: SiteQuality
SIO_000300: 1.295586e6

QD
type: SiteQuality
SIO_000300: 1.356e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 971
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5714
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.288825879623663e-4
allele num: 15518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.196452575325399e-5
allele num: 61002
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.307197e6

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 6.426e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.170946441672781e-5
allele num: 10904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61456
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

FS
type: SiteQuality
SIO_000300: 2.951e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.046e0

DP
type: SiteQuality
SIO_000300: 1.318989e6

QD
type: SiteQuality
SIO_000300: 1.14e1

MQ
type: SiteQuality
SIO_000300: 5.784e1

VQSLOD
type: SiteQuality
SIO_000300: -7.139e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeQuality
all individuals: 551
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4070
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46821
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.320313487548983e-5
allele num: 15822
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.132650885050117e-4
allele num: 9378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.37531478116732e-5
allele num: 62742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.419e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

DP
type: SiteQuality
SIO_000300: 1.352057e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3396
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.931761343336905e-5
allele num: 11196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15978
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.050420168067227e-4
allele num: 9520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577386585904473e-5
allele num: 63396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.816e0

FS
type: SiteQuality
SIO_000300: 1.4013e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 5.872e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

DP
type: SiteQuality
SIO_000300: 1.371075e6

GenotypeQuality
all individuals: 554
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48838
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.904719501335708e-5
allele num: 11230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.378682e6

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.071253071253071e-4
allele num: 9768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.178942165101334e-5
allele num: 16184
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 4.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 1.395202e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 51032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.095783542814686e-5
allele num: 64604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.826e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.261e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.14e0

QD
type: SiteQuality
SIO_000300: 1.442e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.403345e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

GenotypeQuality
all individuals: 662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 239
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538840329927367e-5
allele num: 64984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 7.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

DP
type: SiteQuality
SIO_000300: 1.414254e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.75e-1

FS
type: SiteQuality
SIO_000300: 2.493e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.326e0

QD
type: SiteQuality
SIO_000300: 1.158e1

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536617597344725e-5
allele num: 65078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.418921e6

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 1.162e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.378161590706537e-4
allele num: 65078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.747946163258172e-4
allele num: 11442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 1.162e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 1.418921e6

QD
type: SiteQuality
SIO_000300: 1.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.989341254586755e-4
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.419354e6

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

FS
type: SiteQuality
SIO_000300: 5.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

QD
type: SiteQuality
SIO_000300: 1.195e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

GenotypeQuality
all individuals: 51446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4500
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.075268817204301e-4
allele num: 65100
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

FS
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.195e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.419354e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51447
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.444e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.44e0

VQSLOD
type: SiteQuality
SIO_000300: -4.383e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-2

DP
type: SiteQuality
SIO_000300: 1.420626e6

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.974067424695791e-5
allele num: 10026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532332209623046e-5
allele num: 65260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.03e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 9.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 1.423818e6

GenotypeQuality
all individuals: 827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51898
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 9.75e1
variant carriers: 25

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.353883664228492e-4
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.21563102930818e-4
allele num: 65306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

DP
type: SiteQuality
SIO_000300: 1.425448e6

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 1.213e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51898
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531252871099133e-5
allele num: 65306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.425448e6

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.213e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.442002442002442e-4
allele num: 16380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.289e1

VQSLOD
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

FS
type: SiteQuality
SIO_000300: 5.573e0

DP
type: SiteQuality
SIO_000300: 1.424781e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529192280637367e-5
allele num: 65394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 2.71e0

VQSLOD
type: SiteQuality
SIO_000300: -8.204e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.425706e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51834
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.83981356555869e-4
allele num: 16306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

DP
type: SiteQuality
SIO_000300: 1.425757e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

FS
type: SiteQuality
SIO_000300: 3.327e0

QD
type: SiteQuality
SIO_000300: 1.16e1

VQSLOD
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 1.425221e6

QD
type: SiteQuality
SIO_000300: 1.35e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

FS
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 4520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.972155926809865e-4
allele num: 10056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

QD
type: SiteQuality
SIO_000300: 1.252e1

DP
type: SiteQuality
SIO_000300: 1.424843e6

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.989748369058714e-4
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.424843e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.252e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058571647040832e-5
allele num: 65390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

DP
type: SiteQuality
SIO_000300: 1.424843e6

MQ
type: SiteQuality
SIO_000300: 5.892e1

QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.070205479452055e-4
allele num: 65408
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.422246e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 5.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.3e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530737203036983e-5
allele num: 65328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

FS
type: SiteQuality
SIO_000300: 9.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

DP
type: SiteQuality
SIO_000300: 1.417758e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.283e1

VQSLOD
type: SiteQuality
SIO_000300: -3.921e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.635e0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.946290033817386e-5
allele num: 10054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.258e0

QD
type: SiteQuality
SIO_000300: 1.168e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.413258e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.75e1
variant carriers: 59

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.989834562487542e-4
allele num: 10034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 8.296970069448712e-4
allele num: 65084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.460783046905285e-5
allele num: 15478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.546551190844417e-4
allele num: 6466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.092e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.116e0

DP
type: SiteQuality
SIO_000300: 1.401456e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537941004583064e-5
allele num: 65022
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.528267397832615e-5
allele num: 15318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.909e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.117e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 3.317e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

DP
type: SiteQuality
SIO_000300: 1.39384e6

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.38841e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

FS
type: SiteQuality
SIO_000300: 5.073e0

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.112e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

GenotypeQuality
all individuals: 4254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48598
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079576250307958e-5
allele num: 64944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.073e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.112e1

DP
type: SiteQuality
SIO_000300: 1.38841e6

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.160092807424594e-3
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

DP
type: SiteQuality
SIO_000300: 1.386247e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3664
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15126
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.518e0

MQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

DP
type: SiteQuality
SIO_000300: 1.383828e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.066e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e-1

QD
type: SiteQuality
SIO_000300: 7.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.299e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2