12-58114284-ATCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114284
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114281
    reference: chr 12
allele count: 12
allele frequency: 9.911130199213717e-5
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1657_1659delTTC
  hgvsp: ENSP00000373794.5:p.Phe553del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1705_1707delTTC
  hgvsp: ENSP00000257966.8:p.Phe569del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1822_1824delTTC
  hgvsp: ENSP00000373798.6:p.Phe608del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1480_1482delTTC
  hgvsp: ENSP00000407360.2:p.Phe494del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1606_1608delTTC
  hgvsp: ENSP00000447866.1:p.Phe536del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3085_3087delTTC
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+473_534+475delAGA
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1702_1704delTTC
  hgvsp: ENSP00000450010.1:p.Phe568del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1546_1548delTTC
  hgvsp: ENSP00000389632.2:p.Phe516del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1084_1086delTTC
  hgvsp: ENSP00000413112.2:p.Phe362del
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.297_299delTTC
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1867_1869delTTC
  hgvsp: ENSP00000318165.7:p.Phe623del
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11772
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe623del
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: ATCT
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

12-58114284-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114284
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114284
    reference: chr 12
allele count: 3
allele frequency: 2.477782549803429e-5
allele num: 121076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1474A>G
  hgvsp: ENSP00000407360.2:p.Ile492Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1696A>G
  hgvsp: ENSP00000450010.1:p.Ile566Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1816A>G
  hgvsp: ENSP00000373798.6:p.Ile606Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.291A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+476T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1540A>G
  hgvsp: ENSP00000389632.2:p.Ile514Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1699A>G
  hgvsp: ENSP00000257966.8:p.Ile567Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1861A>G
  hgvsp: ENSP00000318165.7:p.Ile621Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1651A>G
  hgvsp: ENSP00000373794.5:p.Ile551Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1078A>G
  hgvsp: ENSP00000413112.2:p.Ile360Val
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3079A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1600A>G
  hgvsp: ENSP00000447866.1:p.Ile534Val
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile621Val
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-58114285-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114285
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114285
    reference: chr 12
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+475A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.292T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1541T>A
  hgvsp: ENSP00000389632.2:p.Ile514Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1079T>A
  hgvsp: ENSP00000413112.2:p.Ile360Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1862T>A
  hgvsp: ENSP00000318165.7:p.Ile621Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1475T>A
  hgvsp: ENSP00000407360.2:p.Ile492Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1697T>A
  hgvsp: ENSP00000450010.1:p.Ile566Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1601T>A
  hgvsp: ENSP00000447866.1:p.Ile534Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1652T>A
  hgvsp: ENSP00000373794.5:p.Ile551Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1817T>A
  hgvsp: ENSP00000373798.6:p.Ile606Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1700T>A
  hgvsp: ENSP00000257966.8:p.Ile567Asn
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3080T>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile621Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

12-58114285-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114285
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114285
    reference: chr 12
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1817T>C
  hgvsp: ENSP00000373798.6:p.Ile606Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1541T>C
  hgvsp: ENSP00000389632.2:p.Ile514Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1475T>C
  hgvsp: ENSP00000407360.2:p.Ile492Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3080T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1700T>C
  hgvsp: ENSP00000257966.8:p.Ile567Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1079T>C
  hgvsp: ENSP00000413112.2:p.Ile360Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1601T>C
  hgvsp: ENSP00000447866.1:p.Ile534Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1652T>C
  hgvsp: ENSP00000373794.5:p.Ile551Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1862T>C
  hgvsp: ENSP00000318165.7:p.Ile621Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+475A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1697T>C
  hgvsp: ENSP00000450010.1:p.Ile566Thr
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.292T>C
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile621Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/12-58114286-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114286
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114286
    reference: chr 12
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1698C>A
  hgvsp: ENST00000552285.1:c.1698C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.293C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1818C>A
  hgvsp: ENST00000389146.6:c.1818C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1080C>A
  hgvsp: ENST00000413095.2:c.1080C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1476C>A
  hgvsp: ENST00000439210.2:c.1476C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1863C>A
  hgvsp: ENST00000315970.7:c.1863C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1653C>A
  hgvsp: ENST00000389142.5:c.1653C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1542C>A
  hgvsp: ENST00000435406.2:c.1542C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+474G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3081C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1701C>A
  hgvsp: ENST00000257966.8:c.1701C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1602C>A
  hgvsp: ENST00000551035.1:c.1602C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13954
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile621Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

12-58114286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114286
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114286
    reference: chr 12
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1542C>T
  hgvsp: ENST00000435406.2:c.1542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1698C>T
  hgvsp: ENST00000552285.1:c.1698C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1602C>T
  hgvsp: ENST00000551035.1:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1080C>T
  hgvsp: ENST00000413095.2:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.293C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1653C>T
  hgvsp: ENST00000389142.5:c.1653C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1863C>T
  hgvsp: ENST00000315970.7:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1701C>T
  hgvsp: ENST00000257966.8:c.1701C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1476C>T
  hgvsp: ENST00000439210.2:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1818C>T
  hgvsp: ENST00000389146.6:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3081C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+474G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile621Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

12-58114290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114290
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114290
    reference: chr 12
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1657T>C
  hgvsp: ENSP00000373794.5:p.Phe553Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1822T>C
  hgvsp: ENSP00000373798.6:p.Phe608Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.297T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1084T>C
  hgvsp: ENSP00000413112.2:p.Phe362Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1606T>C
  hgvsp: ENSP00000447866.1:p.Phe536Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1480T>C
  hgvsp: ENSP00000407360.2:p.Phe494Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3085T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+470A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1702T>C
  hgvsp: ENSP00000450010.1:p.Phe568Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1705T>C
  hgvsp: ENSP00000257966.8:p.Phe569Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1867T>C
  hgvsp: ENSP00000318165.7:p.Phe623Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1546T>C
  hgvsp: ENSP00000389632.2:p.Phe516Leu
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28400
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe623Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

12-58114306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114306
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114306
    reference: chr 12
allele count: 6
allele frequency: 5.022433536462867e-5
allele num: 119464
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+454C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+5G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+5G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10515
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1878+5G>A
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

12-58114312-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114312
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114312
    reference: chr 12
allele count: 1
allele frequency: 8.426445556735258e-6
allele num: 118674
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+448A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+11T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+11T>C
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

12-58114316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114316
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114316
    reference: chr 12
allele count: 1
allele frequency: 8.460236886632826e-6
allele num: 118200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+444G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+15C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+15C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8267
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

12-58114318-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114318
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114318
    reference: chr 12
allele count: 1
allele frequency: 8.471130387638926e-6
allele num: 118048
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+442G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+17C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+17C>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

12-58114320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114320
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114320
    reference: chr 12
allele count: 9
allele frequency: 7.65123950079913e-5
allele num: 117628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+19C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+440G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+19C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19803
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

12-58114321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114321
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114321
    reference: chr 12
allele count: 5
allele frequency: 4.24844931599966e-5
allele num: 117690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+439C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+20G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+20G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

12-58114332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114332
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114332
    reference: chr 12
allele count: 2
allele frequency: 1.714031058242775e-5
allele num: 116684
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+428G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+31C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+31C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

12-58114353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114353
    reference: chr 12
allele count: 593
allele frequency: 5.27148597233581e-3
allele num: 112492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1713+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1557+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1095+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1716+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1491+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3096+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.308+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1833+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1878+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1668+52G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+407C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1617+52G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14052
  bin: 1.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 2.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 2.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 9279
  bin: 1.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 7.5e0
  variant carriers: 30
genotype quality: GenotypeQuality
num of homozygotes: 8
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

12-58114519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114519
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114519
    reference: chr 12
allele count: 1
allele frequency: 9.068978651624254e-6
allele num: 110266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+241C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-48G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-48G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

12-58114522-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114522
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114522
    reference: chr 12
allele count: 8
allele frequency: 7.253867217960575e-5
allele num: 110286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-45C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+238G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-45C>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15364
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

12-58114524-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114524
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114524
    reference: chr 12
allele count: 1
allele frequency: 9.067169592340056e-6
allele num: 110288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+236G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-43C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-43C>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8366
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

12-58114525-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114525
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114525
    reference: chr 12
allele count: 1
allele frequency: 9.065854366115463e-6
allele num: 110304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+235T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-42A>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-42A>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15355
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

12-58114526-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114526
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114526
    reference: chr 12
allele count: 3
allele frequency: 2.723113789848232e-5
allele num: 110168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+234T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-41A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-41A>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum

12-58114527-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114527
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114527
    reference: chr 12
allele count: 4
allele frequency: 3.625421455244172e-5
allele num: 110332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+233G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-40C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-40C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

12-58114528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114528
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114528
    reference: chr 12
allele count: 7
allele frequency: 6.337135614702154e-5
allele num: 110460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+232C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-39G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-39G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8367
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/12-58114547-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114547
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114547
    reference: chr 12
allele count: 1
allele frequency: 8.992158837493705e-6
allele num: 111208
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+213G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-20C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-20C>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-58114549-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114549
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114549
    reference: chr 12
allele count: 1
allele frequency: 8.98020762240023e-6
allele num: 111356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-18T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+211A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-18T>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

12-58114554-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114554
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114554
    reference: chr 12
allele count: 1
allele frequency: 8.952551477170994e-6
allele num: 111700
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+206G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-13C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-13C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15814
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

12-58114555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114555
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114555
    reference: chr 12
allele count: 1
allele frequency: 8.943423900406031e-6
allele num: 111814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+205G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-12C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/12-58114560-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114560
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114560
    reference: chr 12
allele count: 1
allele frequency: 8.909797213015431e-6
allele num: 112236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1558-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1717-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1492-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1714-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1879-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1834-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3097-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1096-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1618-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+200G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.309-7C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1669-7C>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1879-7C>A
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

12-58114568-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114568
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114568
    reference: chr 12
allele count: 1
allele frequency: 8.829086542706291e-6
allele num: 113262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1670T>G
  hgvsp: ENSP00000373794.5:p.Val557Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1718T>G
  hgvsp: ENSP00000257966.8:p.Val573Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1493T>G
  hgvsp: ENSP00000407360.2:p.Val498Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3098T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+192A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1835T>G
  hgvsp: ENSP00000373798.6:p.Val612Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1715T>G
  hgvsp: ENSP00000450010.1:p.Val572Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1559T>G
  hgvsp: ENSP00000389632.2:p.Val520Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1619T>G
  hgvsp: ENSP00000447866.1:p.Val540Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.310T>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1880T>G
  hgvsp: ENSP00000318165.7:p.Val627Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1097T>G
  hgvsp: ENSP00000413112.2:p.Val366Gly
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val627Gly
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

12-58114571-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114571
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114571
    reference: chr 12
allele count: 1
allele frequency: 8.789972399486666e-6
allele num: 113766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3101C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1718C>T
  hgvsp: ENSP00000450010.1:p.Pro573Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+189G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1883C>T
  hgvsp: ENSP00000318165.7:p.Pro628Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1673C>T
  hgvsp: ENSP00000373794.5:p.Pro558Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1562C>T
  hgvsp: ENSP00000389632.2:p.Pro521Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1496C>T
  hgvsp: ENSP00000407360.2:p.Pro499Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1721C>T
  hgvsp: ENSP00000257966.8:p.Pro574Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1100C>T
  hgvsp: ENSP00000413112.2:p.Pro367Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.313C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1838C>T
  hgvsp: ENSP00000373798.6:p.Pro613Leu
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1622C>T
  hgvsp: ENSP00000447866.1:p.Pro541Leu
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro628Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

12-58114572-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114572
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114572
    reference: chr 12
allele count: 3
allele frequency: 2.627338331114692e-5
allele num: 114184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1719G>A
  hgvsp: ENST00000552285.1:c.1719G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1101G>A
  hgvsp: ENST00000413095.2:c.1101G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1497G>A
  hgvsp: ENST00000439210.2:c.1497G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.314G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+188C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1839G>A
  hgvsp: ENST00000389146.6:c.1839G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1722G>A
  hgvsp: ENST00000257966.8:c.1722G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1884G>A
  hgvsp: ENST00000315970.7:c.1884G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1623G>A
  hgvsp: ENST00000551035.1:c.1623G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1674G>A
  hgvsp: ENST00000389142.5:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1563G>A
  hgvsp: ENST00000435406.2:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3102G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro628Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

12-58114597-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114597
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114597
    reference: chr 12
allele count: 1
allele frequency: 8.479894170920747e-6
allele num: 117926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1744C>T
  hgvsp: ENSP00000450010.1:p.Arg582Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1699C>T
  hgvsp: ENSP00000373794.5:p.Arg567Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.339C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3127C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1909C>T
  hgvsp: ENSP00000318165.7:p.Arg637Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+163G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1747C>T
  hgvsp: ENSP00000257966.8:p.Arg583Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1522C>T
  hgvsp: ENSP00000407360.2:p.Arg508Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1588C>T
  hgvsp: ENSP00000389632.2:p.Arg530Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1864C>T
  hgvsp: ENSP00000373798.6:p.Arg622Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1648C>T
  hgvsp: ENSP00000447866.1:p.Arg550Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1126C>T
  hgvsp: ENSP00000413112.2:p.Arg376Cys
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg637Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

12-58114598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114598
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114598
    reference: chr 12
allele count: 4
allele frequency: 3.383522246658772e-5
allele num: 118220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1649G>A
  hgvsp: ENSP00000447866.1:p.Arg550His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1127G>A
  hgvsp: ENSP00000413112.2:p.Arg376His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1589G>A
  hgvsp: ENSP00000389632.2:p.Arg530His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1745G>A
  hgvsp: ENSP00000450010.1:p.Arg582His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+162C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1865G>A
  hgvsp: ENSP00000373798.6:p.Arg622His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.340G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1910G>A
  hgvsp: ENSP00000318165.7:p.Arg637His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1700G>A
  hgvsp: ENSP00000373794.5:p.Arg567His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1748G>A
  hgvsp: ENSP00000257966.8:p.Arg583His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1523G>A
  hgvsp: ENSP00000407360.2:p.Arg508His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3128G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4582
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg637His
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

12-58114599-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114599
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114599
    reference: chr 12
allele count: 1
allele frequency: 8.444519506840061e-6
allele num: 118420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1128C>T
  hgvsp: ENST00000413095.2:c.1128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3129C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1746C>T
  hgvsp: ENST00000552285.1:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1866C>T
  hgvsp: ENST00000389146.6:c.1866C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1524C>T
  hgvsp: ENST00000439210.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1701C>T
  hgvsp: ENST00000389142.5:c.1701C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+161G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1650C>T
  hgvsp: ENST00000551035.1:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1911C>T
  hgvsp: ENST00000315970.7:c.1911C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.341C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1749C>T
  hgvsp: ENST00000257966.8:c.1749C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1590C>T
  hgvsp: ENST00000435406.2:c.1590C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg637Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

12-58114602-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114602
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114602
    reference: chr 12
allele count: 3
allele frequency: 2.525337553452978e-5
allele num: 118796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1527G>T
  hgvsp: ENSP00000407360.2:p.Gln509His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1914G>T
  hgvsp: ENSP00000318165.7:p.Gln638His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1653G>T
  hgvsp: ENSP00000447866.1:p.Gln551His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1131G>T
  hgvsp: ENSP00000413112.2:p.Gln377His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1749G>T
  hgvsp: ENSP00000450010.1:p.Gln583His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1752G>T
  hgvsp: ENSP00000257966.8:p.Gln584His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1704G>T
  hgvsp: ENSP00000373794.5:p.Gln568His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1869G>T
  hgvsp: ENSP00000373798.6:p.Gln623His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.344G>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3132G>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+158C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1593G>T
  hgvsp: ENSP00000389632.2:p.Gln531His
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln638His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

12-58114603-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114603
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114603
    reference: chr 12
allele count: 2
allele frequency: 1.682935038707506e-5
allele num: 118840
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1915C>G
  hgvsp: ENSP00000318165.7:p.Arg639Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3133C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1750C>G
  hgvsp: ENSP00000450010.1:p.Arg584Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1870C>G
  hgvsp: ENSP00000373798.6:p.Arg624Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1132C>G
  hgvsp: ENSP00000413112.2:p.Arg378Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1654C>G
  hgvsp: ENSP00000447866.1:p.Arg552Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1594C>G
  hgvsp: ENSP00000389632.2:p.Arg532Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1705C>G
  hgvsp: ENSP00000373794.5:p.Arg569Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1528C>G
  hgvsp: ENSP00000407360.2:p.Arg510Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.345C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1753C>G
  hgvsp: ENSP00000257966.8:p.Arg585Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+157G>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg639Gly
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

12-58114603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114603
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114603
    reference: chr 12
allele count: 5
allele frequency: 4.207337596768765e-5
allele num: 118840
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+157G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1594C>T
  hgvsp: ENSP00000389632.2:p.Arg532Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1132C>T
  hgvsp: ENSP00000413112.2:p.Arg378Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.345C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1750C>T
  hgvsp: ENSP00000450010.1:p.Arg584Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1528C>T
  hgvsp: ENSP00000407360.2:p.Arg510Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1705C>T
  hgvsp: ENSP00000373794.5:p.Arg569Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1753C>T
  hgvsp: ENSP00000257966.8:p.Arg585Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1654C>T
  hgvsp: ENSP00000447866.1:p.Arg552Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3133C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1870C>T
  hgvsp: ENSP00000373798.6:p.Arg624Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1915C>T
  hgvsp: ENSP00000318165.7:p.Arg639Trp
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg639Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

12-58114604-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114604
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114604
    reference: chr 12
allele count: 6
allele frequency: 5.041762600205032e-5
allele num: 119006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1133G>A
  hgvsp: ENSP00000413112.2:p.Arg378Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1595G>A
  hgvsp: ENSP00000389632.2:p.Arg532Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1871G>A
  hgvsp: ENSP00000373798.6:p.Arg624Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+156C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1706G>A
  hgvsp: ENSP00000373794.5:p.Arg569Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1655G>A
  hgvsp: ENSP00000447866.1:p.Arg552Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1916G>A
  hgvsp: ENSP00000318165.7:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3134G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1754G>A
  hgvsp: ENSP00000257966.8:p.Arg585Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1529G>A
  hgvsp: ENSP00000407360.2:p.Arg510Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.346G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1751G>A
  hgvsp: ENSP00000450010.1:p.Arg584Gln
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15586
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8339
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg639Gln
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

12-58114618-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114618
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114618
    reference: chr 12
allele count: 2
allele frequency: 1.667361400583577e-5
allele num: 119950
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+142C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1720G>C
  hgvsp: ENSP00000373794.5:p.Glu574Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1669G>C
  hgvsp: ENSP00000447866.1:p.Glu557Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3148G>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1930G>C
  hgvsp: ENSP00000318165.7:p.Glu644Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1543G>C
  hgvsp: ENSP00000407360.2:p.Glu515Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1147G>C
  hgvsp: ENSP00000413112.2:p.Glu383Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1768G>C
  hgvsp: ENSP00000257966.8:p.Glu590Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1609G>C
  hgvsp: ENSP00000389632.2:p.Glu537Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1885G>C
  hgvsp: ENSP00000373798.6:p.Glu629Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1765G>C
  hgvsp: ENSP00000450010.1:p.Glu589Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.360G>C
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu644Gln
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

12-58114625-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114625
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114625
    reference: chr 12
allele count: 1
allele frequency: 8.316423272678886e-6
allele num: 120244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1616A>G
  hgvsp: ENSP00000389632.2:p.Asn539Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1772A>G
  hgvsp: ENSP00000450010.1:p.Asn591Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1775A>G
  hgvsp: ENSP00000257966.8:p.Asn592Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1550A>G
  hgvsp: ENSP00000407360.2:p.Asn517Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1154A>G
  hgvsp: ENSP00000413112.2:p.Asn385Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1727A>G
  hgvsp: ENSP00000373794.5:p.Asn576Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1676A>G
  hgvsp: ENSP00000447866.1:p.Asn559Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1937A>G
  hgvsp: ENSP00000318165.7:p.Asn646Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3155A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.367A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1892A>G
  hgvsp: ENSP00000373798.6:p.Asn631Ser
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+135T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn646Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

12-58114630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114630
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114630
    reference: chr 12
allele count: 2
allele frequency: 1.660908849322349e-5
allele num: 120416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.372C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1555C>T
  hgvsp: ENSP00000407360.2:p.Arg519Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+130G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1621C>T
  hgvsp: ENSP00000389632.2:p.Arg541Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1732C>T
  hgvsp: ENSP00000373794.5:p.Arg578Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1897C>T
  hgvsp: ENSP00000373798.6:p.Arg633Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1681C>T
  hgvsp: ENSP00000447866.1:p.Arg561Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1777C>T
  hgvsp: ENSP00000450010.1:p.Arg593Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1780C>T
  hgvsp: ENSP00000257966.8:p.Arg594Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1159C>T
  hgvsp: ENSP00000413112.2:p.Arg387Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1942C>T
  hgvsp: ENSP00000318165.7:p.Arg648Cys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3160C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15656
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg648Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

12-58114631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114631
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114631
    reference: chr 12
allele count: 3
allele frequency: 2.489626556016598e-5
allele num: 120500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1682G>A
  hgvsp: ENSP00000447866.1:p.Arg561His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1778G>A
  hgvsp: ENSP00000450010.1:p.Arg593His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1160G>A
  hgvsp: ENSP00000413112.2:p.Arg387His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1556G>A
  hgvsp: ENSP00000407360.2:p.Arg519His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+129C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1622G>A
  hgvsp: ENSP00000389632.2:p.Arg541His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3161G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.373G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1733G>A
  hgvsp: ENSP00000373794.5:p.Arg578His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1898G>A
  hgvsp: ENSP00000373798.6:p.Arg633His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1781G>A
  hgvsp: ENSP00000257966.8:p.Arg594His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1943G>A
  hgvsp: ENSP00000318165.7:p.Arg648His
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg648His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-58114633-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114633
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114633
    reference: chr 12
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1684C>G
  hgvsp: ENSP00000447866.1:p.Arg562Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1558C>G
  hgvsp: ENSP00000407360.2:p.Arg520Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1735C>G
  hgvsp: ENSP00000373794.5:p.Arg579Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3163C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1900C>G
  hgvsp: ENSP00000373798.6:p.Arg634Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+127G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1945C>G
  hgvsp: ENSP00000318165.7:p.Arg649Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1624C>G
  hgvsp: ENSP00000389632.2:p.Arg542Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1162C>G
  hgvsp: ENSP00000413112.2:p.Arg388Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1780C>G
  hgvsp: ENSP00000450010.1:p.Arg594Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1783C>G
  hgvsp: ENSP00000257966.8:p.Arg595Gly
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.375C>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg649Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

12-58114633-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114633
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114633
    reference: chr 12
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.375C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+127G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1558C>T
  hgvsp: ENSP00000407360.2:p.Arg520Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1624C>T
  hgvsp: ENSP00000389632.2:p.Arg542Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1162C>T
  hgvsp: ENSP00000413112.2:p.Arg388Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1945C>T
  hgvsp: ENSP00000318165.7:p.Arg649Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1735C>T
  hgvsp: ENSP00000373794.5:p.Arg579Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1780C>T
  hgvsp: ENSP00000450010.1:p.Arg594Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1900C>T
  hgvsp: ENSP00000373798.6:p.Arg634Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1684C>T
  hgvsp: ENSP00000447866.1:p.Arg562Trp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3163C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1783C>T
  hgvsp: ENSP00000257966.8:p.Arg595Trp
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg649Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

12-58114634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114634
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114634
    reference: chr 12
allele count: 4
allele frequency: 3.314660744472803e-5
allele num: 120676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1163G>A
  hgvsp: ENSP00000413112.2:p.Arg388Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1784G>A
  hgvsp: ENSP00000257966.8:p.Arg595Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3164G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1625G>A
  hgvsp: ENSP00000389632.2:p.Arg542Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1559G>A
  hgvsp: ENSP00000407360.2:p.Arg520Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1781G>A
  hgvsp: ENSP00000450010.1:p.Arg594Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1946G>A
  hgvsp: ENSP00000318165.7:p.Arg649Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1901G>A
  hgvsp: ENSP00000373798.6:p.Arg634Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.376G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1736G>A
  hgvsp: ENSP00000373794.5:p.Arg579Gln
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+126C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1685G>A
  hgvsp: ENSP00000447866.1:p.Arg562Gln
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17483
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15686
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg649Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

12-58114636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114636
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114636
    reference: chr 12
allele count: 3
allele frequency: 2.484801298722812e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1786G>A
  hgvsp: ENSP00000257966.8:p.Val596Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1687G>A
  hgvsp: ENSP00000447866.1:p.Val563Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3166G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+124C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.378G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1948G>A
  hgvsp: ENSP00000318165.7:p.Val650Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1561G>A
  hgvsp: ENSP00000407360.2:p.Val521Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1738G>A
  hgvsp: ENSP00000373794.5:p.Val580Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1627G>A
  hgvsp: ENSP00000389632.2:p.Val543Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1165G>A
  hgvsp: ENSP00000413112.2:p.Val389Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1903G>A
  hgvsp: ENSP00000373798.6:p.Val635Met
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1783G>A
  hgvsp: ENSP00000450010.1:p.Val595Met
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val650Met
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

12-58114644-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114644
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114644
    reference: chr 12
allele count: 3
allele frequency: 2.48147167813658e-5
allele num: 120896
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1956C>T
  hgvsp: ENST00000315970.7:c.1956C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1695C>T
  hgvsp: ENST00000551035.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1794C>T
  hgvsp: ENST00000257966.8:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.386C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+116G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1569C>T
  hgvsp: ENST00000439210.2:c.1569C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1911C>T
  hgvsp: ENST00000389146.6:c.1911C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3174C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1746C>T
  hgvsp: ENST00000389142.5:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1635C>T
  hgvsp: ENST00000435406.2:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1791C>T
  hgvsp: ENST00000552285.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1173C>T
  hgvsp: ENST00000413095.2:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly652Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

12-58114646-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114646
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114646
    reference: chr 12
allele count: 4
allele frequency: 3.307315782510914e-5
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.388C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1175C>T
  hgvsp: ENSP00000413112.2:p.Ser392Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1958C>T
  hgvsp: ENSP00000318165.7:p.Ser653Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1913C>T
  hgvsp: ENSP00000373798.6:p.Ser638Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1796C>T
  hgvsp: ENSP00000257966.8:p.Ser599Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1571C>T
  hgvsp: ENSP00000407360.2:p.Ser524Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1748C>T
  hgvsp: ENSP00000373794.5:p.Ser583Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1793C>T
  hgvsp: ENSP00000450010.1:p.Ser598Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1637C>T
  hgvsp: ENSP00000389632.2:p.Ser546Phe
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3176C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+114G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1697C>T
  hgvsp: ENSP00000447866.1:p.Ser566Phe
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser653Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-58114650-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114650
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114650
    reference: chr 12
allele count: 68
allele frequency: 5.62002049654534e-4
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1701A>G
  hgvsp: ENST00000551035.1:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1917A>G
  hgvsp: ENST00000389146.6:c.1917A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1179A>G
  hgvsp: ENST00000413095.2:c.1179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1575A>G
  hgvsp: ENST00000439210.2:c.1575A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1797A>G
  hgvsp: ENST00000552285.1:c.1797A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1641A>G
  hgvsp: ENST00000435406.2:c.1641A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1752A>G
  hgvsp: ENST00000389142.5:c.1752A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1962A>G
  hgvsp: ENST00000315970.7:c.1962A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3180A>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+110T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1800A>G
  hgvsp: ENST00000257966.8:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.392A>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17703
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8316
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8485
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Pro654Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

12-58114652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114652
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114652
    reference: chr 12
allele count: 2
allele frequency: 1.652428243303535e-5
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1802G>A
  hgvsp: ENSP00000257966.8:p.Gly601Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.394G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1703G>A
  hgvsp: ENSP00000447866.1:p.Gly568Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1181G>A
  hgvsp: ENSP00000413112.2:p.Gly394Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+108C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1754G>A
  hgvsp: ENSP00000373794.5:p.Gly585Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1964G>A
  hgvsp: ENSP00000318165.7:p.Gly655Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1643G>A
  hgvsp: ENSP00000389632.2:p.Gly548Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1919G>A
  hgvsp: ENSP00000373798.6:p.Gly640Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1577G>A
  hgvsp: ENSP00000407360.2:p.Gly526Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1799G>A
  hgvsp: ENSP00000450010.1:p.Gly600Asp
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3182G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly655Asp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

12-58114664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114664
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114664
    reference: chr 12
allele count: 2
allele frequency: 1.650818806127839e-5
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3194C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1976C>T
  hgvsp: ENSP00000318165.7:p.Thr659Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1814C>T
  hgvsp: ENSP00000257966.8:p.Thr605Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1766C>T
  hgvsp: ENSP00000373794.5:p.Thr589Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1193C>T
  hgvsp: ENSP00000413112.2:p.Thr398Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1811C>T
  hgvsp: ENSP00000450010.1:p.Thr604Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1655C>T
  hgvsp: ENSP00000389632.2:p.Thr552Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1589C>T
  hgvsp: ENSP00000407360.2:p.Thr530Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+96G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1931C>T
  hgvsp: ENSP00000373798.6:p.Thr644Ile
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.406C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1715C>T
  hgvsp: ENSP00000447866.1:p.Thr572Ile
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr659Ile
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

12-58114668-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114668
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114668
    reference: chr 12
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1770G>T
  hgvsp: ENST00000389142.5:c.1770G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1719G>T
  hgvsp: ENST00000551035.1:c.1719G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1815G>T
  hgvsp: ENST00000552285.1:c.1815G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1980G>T
  hgvsp: ENST00000315970.7:c.1980G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+92C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1935G>T
  hgvsp: ENST00000389146.6:c.1935G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1197G>T
  hgvsp: ENST00000413095.2:c.1197G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1659G>T
  hgvsp: ENST00000435406.2:c.1659G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.410G>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3198G>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1818G>T
  hgvsp: ENST00000257966.8:c.1818G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1593G>T
  hgvsp: ENST00000439210.2:c.1593G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly660Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

12-58114668-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114668
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114668
    reference: chr 12
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1593G>C
  hgvsp: ENST00000439210.2:c.1593G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1818G>C
  hgvsp: ENST00000257966.8:c.1818G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1980G>C
  hgvsp: ENST00000315970.7:c.1980G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1197G>C
  hgvsp: ENST00000413095.2:c.1197G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3198G>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1719G>C
  hgvsp: ENST00000551035.1:c.1719G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1935G>C
  hgvsp: ENST00000389146.6:c.1935G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1815G>C
  hgvsp: ENST00000552285.1:c.1815G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1659G>C
  hgvsp: ENST00000435406.2:c.1659G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+92C>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1770G>C
  hgvsp: ENST00000389142.5:c.1770G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.410G>C
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17913
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly660Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

12-58114673-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114673
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114673
    reference: chr 12
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3203T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1724T>C
  hgvsp: ENSP00000447866.1:p.Leu575Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1598T>C
  hgvsp: ENSP00000407360.2:p.Leu533Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1202T>C
  hgvsp: ENSP00000413112.2:p.Leu401Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1823T>C
  hgvsp: ENSP00000257966.8:p.Leu608Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1820T>C
  hgvsp: ENSP00000450010.1:p.Leu607Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1985T>C
  hgvsp: ENSP00000318165.7:p.Leu662Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1940T>C
  hgvsp: ENSP00000373798.6:p.Leu647Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+87A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.415T>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1664T>C
  hgvsp: ENSP00000389632.2:p.Leu555Pro
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1775T>C
  hgvsp: ENSP00000373794.5:p.Leu592Pro
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu662Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

12-58114675-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114675
    reference: chr 12
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1822G>C
  hgvsp: ENSP00000450010.1:p.Asp608His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.417G>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1825G>C
  hgvsp: ENSP00000257966.8:p.Asp609His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1600G>C
  hgvsp: ENSP00000407360.2:p.Asp534His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1987G>C
  hgvsp: ENSP00000318165.7:p.Asp663His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+85C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1942G>C
  hgvsp: ENSP00000373798.6:p.Asp648His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1777G>C
  hgvsp: ENSP00000373794.5:p.Asp593His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1204G>C
  hgvsp: ENSP00000413112.2:p.Asp402His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3205G>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1666G>C
  hgvsp: ENSP00000389632.2:p.Asp556His
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1726G>C
  hgvsp: ENSP00000447866.1:p.Asp576His
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp663His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

12-58114677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114677
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114677
    reference: chr 12
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1989C>T
  hgvsp: ENST00000315970.7:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1602C>T
  hgvsp: ENST00000439210.2:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.419C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+83G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1206C>T
  hgvsp: ENST00000413095.2:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3207C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1668C>T
  hgvsp: ENST00000435406.2:c.1668C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1824C>T
  hgvsp: ENST00000552285.1:c.1824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1779C>T
  hgvsp: ENST00000389142.5:c.1779C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1728C>T
  hgvsp: ENST00000551035.1:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1827C>T
  hgvsp: ENST00000257966.8:c.1827C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1944C>T
  hgvsp: ENST00000389146.6:c.1944C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp663Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

12-58114678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114678
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114678
    reference: chr 12
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.1603G>A
  hgvsp: ENSP00000407360.2:p.Glu535Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.1669G>A
  hgvsp: ENSP00000389632.2:p.Glu557Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.1945G>A
  hgvsp: ENSP00000373798.6:p.Glu649Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.1729G>A
  hgvsp: ENSP00000447866.1:p.Glu577Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+82C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.1780G>A
  hgvsp: ENSP00000373794.5:p.Glu594Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.1825G>A
  hgvsp: ENSP00000450010.1:p.Glu609Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3208G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.1990G>A
  hgvsp: ENSP00000318165.7:p.Glu664Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.1207G>A
  hgvsp: ENSP00000413112.2:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.420G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.1828G>A
  hgvsp: ENSP00000257966.8:p.Glu610Lys
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu664Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-58114696-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114696
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114695
    reference: chr 12
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3228delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*6delA
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+63delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.440delA
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CA
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/12-58114703-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114703
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114703
    reference: chr 12
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3233A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.445A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+57T>G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*11A>C
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-58114704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114704
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114704
    reference: chr 12
allele count: 11
allele frequency: 9.08400224622601e-5
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.446C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+56G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3234C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17823
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/12-58114711-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114711
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114711
    reference: chr 12
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+49G>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.453C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*19C>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3241C>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-58114712-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114712
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114712
    reference: chr 12
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3242C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+48G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*20C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.454C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-58114714-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114714
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114714
    reference: chr 12
allele count: 4
allele frequency: 3.304801877127466e-5
allele num: 121036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+46A>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*22T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.456T>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3244T>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

12-58114716-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114716
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114716
    reference: chr 12
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3246C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.458C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+44G>A
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

12-58114718-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114718
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114718
    reference: chr 12
allele count: 3
allele frequency: 2.479297862845242e-5
allele num: 121002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.460C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+42G>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*26C>G
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3248C>G
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

12-58114718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114718
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114718
    reference: chr 12
allele count: 17
allele frequency: 1.404935455612304e-4
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3248C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+42G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.460C>T
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*26C>T
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15386
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17022
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

12-58114719-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114719
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114719
    reference: chr 12
allele count: 3
allele frequency: 2.479707725116133e-5
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+41C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3249G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.461G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*27G>A
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16973
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

12-58114728-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58114728
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 58114726
    reference: chr 12
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000407360
  ensembl transcript: ENST00000439210
  gene symbol: OS9
  hgvsc: ENST00000439210.2:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000447866
  ensembl transcript: ENST00000551035
  gene symbol: OS9
  hgvsc: ENST00000551035.1:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000413112
  ensembl transcript: ENST00000413095
  gene symbol: OS9
  hgvsc: ENST00000413095.2:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000318165
  ensembl transcript: ENST00000315970
  gene symbol: OS9
  hgvsc: ENST00000315970.7:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000546916
  gene symbol: OS9
  hgvsc: ENST00000546916.1:n.473_474delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000450010
  ensembl transcript: ENST00000552285
  gene symbol: OS9
  hgvsc: ENST00000552285.1:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373798
  ensembl transcript: ENST00000389146
  gene symbol: OS9
  hgvsc: ENST00000389146.6:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000389632
  ensembl transcript: ENST00000435406
  gene symbol: OS9
  hgvsc: ENST00000435406.2:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000257966
  ensembl transcript: ENST00000257966
  gene symbol: OS9
  hgvsc: ENST00000257966.8:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135506
  ensembl protein: ENSP00000373794
  ensembl transcript: ENST00000389142
  gene symbol: OS9
  hgvsc: ENST00000389142.5:c.*39_*40delCT
  variant of: http://identifiers.org/hgnc/16994
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257342
  ensembl transcript: ENST00000549477
  gene symbol: RP11-571M6.7
  hgvsc: ENST00000549477.1:n.534+30_534+31delAG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135506
  ensembl transcript: ENST00000549307
  gene symbol: OS9
  hgvsc: ENST00000549307.1:n.3261_3262delCT
  variant of: http://identifiers.org/hgnc/16994
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8145
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
reference allele: ACT

GenotypeDepth
all individuals: 151
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 485
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2580
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.861448711716091e-4
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505180958101817e-5
allele num: 66590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.738897e6

MQ
type: SiteQuality
SIO_000300: 5.758e1

FS
type: SiteQuality
SIO_000300: 6.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

QD
type: SiteQuality
SIO_000300: 1.76e1

GenotypeDepth
all individuals: 208
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2580
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.89073039121218e-4
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.758e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 6.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.738897e6

QD
type: SiteQuality
SIO_000300: 1.76e1

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8805
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40831
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

DP
type: SiteQuality
SIO_000300: 1.738093e6

MQ
type: SiteQuality
SIO_000300: 5.924e1

FS
type: SiteQuality
SIO_000300: 2.161e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.61e-1

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8805
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.412e1

DP
type: SiteQuality
SIO_000300: 1.738093e6

FS
type: SiteQuality
SIO_000300: 2.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

GenotypeDepth
all individuals: 208
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

African
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Other
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East Asian
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Latino
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South Asian
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European (Finnish)
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ClippingRankSum
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FS
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ReadPosRankSum
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MQ
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DP
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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Latino
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South Asian
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ReadPosRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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MQ
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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Other
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South Asian
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MQRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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MQRankSum
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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MQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 5
allele frequency: 4.982064567556796e-4
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.09377223648795e-5
allele num: 64646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.228954160009832e-4
allele num: 16274
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
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SIO_000300: 2.68e-1

BaseQRankSum
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SIO_000300: 2.81e0

ClippingRankSum
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SIO_000300: 2.29e-1

VQSLOD
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: -3.53e-1

FS
type: SiteQuality
SIO_000300: 1.753e0

QD
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SIO_000300: 1.467e1

DP
type: SiteQuality
SIO_000300: 1.511195e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.217433649866082e-4
allele num: 8214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.182953596933255e-5
allele num: 64694
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.577e0

InbreedingCoeff
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SIO_000300: -1.4e-3

VQSLOD
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DP
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ClippingRankSum
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SIO_000300: 7.55e-1

FS
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SIO_000300: 8.865e0

ReadPosRankSum
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QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.237011380504701e-4
allele num: 8084
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African
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allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 6.169792694965449e-5
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 5.9e-1

ReadPosRankSum
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SIO_000300: 3.5e-1

BaseQRankSum
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QD
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VQSLOD
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SIO_000300: 2.89e0

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -1.4e-3

MQ
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SIO_000300: 5.965e1

DP
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SIO_000300: 1.417792e6

ClippingRankSum
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SIO_000300: -5.34e-1

GenotypeDepth
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variant carriers: 10

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 575

GenotypeQuality
all individuals: 582
bin: 9.25e1
variant carriers: 10

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

African
type: Population
allele count: 440
allele frequency: 4.570953667151464e-2
allele num: 9626
num of homozygotes: 7

South Asian
type: Population
allele count: 3
allele frequency: 1.88040616773223e-4
allele num: 15954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 44
allele frequency: 4.163512490537472e-3
allele num: 10568
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.184834123222749e-3
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 105
allele frequency: 1.703826307078181e-3
allele num: 61626
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 4.8e0

InbreedingCoeff
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SIO_000300: 1.49e-2

BaseQRankSum
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SIO_000300: -1.35e0

ReadPosRankSum
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SIO_000300: 4.7e-1

QD
type: SiteQuality
SIO_000300: 1.408e1

FS
type: SiteQuality
SIO_000300: 7.4e-1

DP
type: SiteQuality
SIO_000300: 1.355742e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2170
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63336
num of homozygotes: 0

African
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Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

BaseQRankSum
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SIO_000300: -9.14e-1

InbreedingCoeff
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SIO_000300: -1.8e-3

ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQ
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DP
type: SiteQuality
SIO_000300: 1.834503e6

QD
type: SiteQuality
SIO_000300: 1.025e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
all individuals: 263
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63366
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.092050209205021e-4
allele num: 9560
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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African
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allele frequency: 6.0156406657309e-4
allele num: 9974
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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QD
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SIO_000300: 1.162e1

ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
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Latino
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num of homozygotes: 0

African
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European (Non-Finnish)
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Other
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East Asian
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577983967682888e-5
allele num: 63372
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.835352e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-2

QD
type: SiteQuality
SIO_000300: 1.221e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 2448
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20985
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variant carriers: 0

GenotypeQuality
all individuals: 5946
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.739336492890995e-5
allele num: 63300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.149e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.8358e6

FS
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

GenotypeDepth
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
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variant carriers: 0

GenotypeQuality
all individuals: 4869
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.15357931251971e-5
allele num: 63420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002606777621817e-4
allele num: 9974
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e0

FS
type: SiteQuality
SIO_000300: 4.339e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 1.837661e6

QD
type: SiteQuality
SIO_000300: 1.074e1

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2165
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variant carriers: 0

GenotypeQuality
all individuals: 686
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variant carriers: 0

GenotypeQuality
all individuals: 3369
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 612
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2706
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 671
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GenotypeQuality
all individuals: 1475
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21683
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5940
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3450
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 5.994005994005994e-4
allele num: 10010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 2.583e0

QD
type: SiteQuality
SIO_000300: 1.083e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.840257e6

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 4849
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variant carriers: 0

GenotypeQuality
all individuals: 316
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3350
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GenotypeQuality
all individuals: 180
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variant carriers: 0

GenotypeQuality
all individuals: 1176
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GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 3565
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 5928
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2159
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GenotypeQuality
all individuals: 9418
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variant carriers: 0

GenotypeQuality
all individuals: 22234
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570203812454857e-5
allele num: 63686
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.243e1

MQRankSum
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SIO_000300: -1.215e0

VQSLOD
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 2.597e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5928
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569760140650509e-5
allele num: 63704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
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SIO_000300: 8.24e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.311e1

MQRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

DP
type: SiteQuality
SIO_000300: 1.854136e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2157
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GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567201604814443e-5
allele num: 63808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.77e1

FS
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QD
type: SiteQuality
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 22829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
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African
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South Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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InbreedingCoeff
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VQSLOD
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QD
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MQRankSum
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DP
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 11476
num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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BaseQRankSum
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FS
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DP
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QD
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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allele num: 64270
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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FS
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InbreedingCoeff
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.552987948813517e-5
allele num: 64392
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

DP
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SIO_000300: 1.882258e6

MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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Latino
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Other
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African
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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Other
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East Asian
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African
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European (Finnish)
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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QD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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East Asian
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Latino
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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QD
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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Other
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South Asian
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African
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FS
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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African
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.518695137138171e-5
allele num: 65846
num of homozygotes: 0

Latino
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East Asian
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African
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allele num: 10294
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European (Finnish)
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Other
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South Asian
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ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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QD
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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QD
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MQRankSum
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DP
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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East Asian
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European (Non-Finnish)
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DP
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 0

African
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allele count: 2
allele frequency: 1.932367149758454e-4
allele num: 10350
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66330
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -5.47e-1

MQ
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SIO_000300: 5.958e1

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.0e-4

DP
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SIO_000300: 1.946314e6

QD
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SIO_000300: 1.217e1

MQRankSum
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SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
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SIO_000300: 3.86e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520659413519785e-5
allele num: 66362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

FS
type: SiteQuality
SIO_000300: 1.5438e1

ClippingRankSum
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SIO_000300: 5.01e-1

VQSLOD
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MQRankSum
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SIO_000300: -2.46e-1

MQ
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SIO_000300: 6.0e1

QD
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SIO_000300: 1.496e1

InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
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SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.947112e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.181233774261343e-5
allele num: 16178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.91e0

VQSLOD
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SIO_000300: 1.15e0

BaseQRankSum
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SIO_000300: -9.62e-1

MQRankSum
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SIO_000300: 1.03e-1

InbreedingCoeff
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SIO_000300: 2.0e-4

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 1.948641e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4917
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GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 7.91e0

BaseQRankSum
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SIO_000300: -9.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 1.948641e6

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 194
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.517255917605252e-5
allele num: 66412
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.11e0

MQRankSum
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ClippingRankSum
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QD
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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South Asian
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

South Asian
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allele frequency: 6.114711997064938e-5
allele num: 16354
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.929384526336099e-4
allele num: 10366
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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Other
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MQRankSum
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FS
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BaseQRankSum
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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FS
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QD
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 11564
num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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MQRankSum
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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QD
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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FS
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Other
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East Asian
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Latino
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South Asian
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FS
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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European (Finnish)
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Other
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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DP
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FS
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
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allele num: 16484
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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SIO_000300: 1.956762e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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FS
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SIO_000300: 5.324e0

InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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East Asian
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South Asian
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allele frequency: 0.0e0
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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FS
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
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num of homozygotes: 0

African
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Other
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European (Non-Finnish)
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allele num: 66616
num of homozygotes: 0

South Asian
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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SIO_000300: 1.954082e6

FS
type: SiteQuality
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 6.067224851352991e-5
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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Other
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DP
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.821600771456124e-4
allele num: 10370
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East Asian
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Latino
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South Asian
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Other
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European (Non-Finnish)
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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Other
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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VQSLOD
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DP
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MQ
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FS
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QD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
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SIO_000300: -2.213e0

ClippingRankSum
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SIO_000300: -6.1e-2

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 2.428068471530897e-4
allele num: 16474
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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QD
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MQ
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MQRankSum
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SIO_000300: 3.88e-1

ReadPosRankSum
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ClippingRankSum
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SIO_000300: 6.08e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.938289e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9772
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
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allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.932103e6

ReadPosRankSum
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FS
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SIO_000300: 1.192e0

BaseQRankSum
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ClippingRankSum
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SIO_000300: -2.51e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.914e1

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.821493624772313e-4
allele num: 16470
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

QD
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DP
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VQSLOD
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 3.0e-4

BaseQRankSum
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SIO_000300: 1.26e0

MQRankSum
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SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 14
allele frequency: 1.211282228759301e-3
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.506669871409686e-5
allele num: 66568
num of homozygotes: 0

Other
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.005168890491646e-5
allele num: 66552
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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FS
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VQSLOD
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DP
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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