10-127429205-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429205
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429205
    reference: chr 10
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2155G>T
  hgvsp: ENSP00000396544.2:p.Ala719Ser
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2159G>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*368G>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.415G>T
  hgvsp: ENSP00000357803.1:p.Ala139Ser
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1139G>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2155G>T
  hgvsp: ENSP00000349244.4:p.Ala719Ser
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2053G>T
  hgvsp: ENSP00000336727.3:p.Ala685Ser
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala719Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

10-127429210-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429210
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429210
    reference: chr 10
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2160G>A
  hgvsp: ENST00000356792.4:c.2160G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*373G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.420G>A
  hgvsp: ENST00000368813.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1144G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2164G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2058G>A
  hgvsp: ENST00000337623.3:c.2058G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2160G>A
  hgvsp: ENST00000419769.2:c.2160G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4142
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu720Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-127429219-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429219
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429219
    reference: chr 10
allele count: 7
allele frequency: 5.775196356676127e-5
allele num: 121208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*382T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2169T>C
  hgvsp: ENST00000356792.4:c.2169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1153T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2067T>C
  hgvsp: ENST00000337623.3:c.2067T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2169T>C
  hgvsp: ENST00000419769.2:c.2169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2173T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.429T>C
  hgvsp: ENST00000368813.1:c.429T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.2169T>C
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

10-127429228-A-ACT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429228
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429230
    reference: chr 10
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: ACT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+9_2170+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+9_*1154+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+9_*383+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+9_2068+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+9_2170+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+9_430+10dupCT
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+9_2174+10dupCT
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

10-127429240-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429240
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429240
    reference: chr 10
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+20T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+20T>C
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/10-127429254-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429254
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429254
    reference: chr 10
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+34A>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+34A>C
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7143
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

10-127429254-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429254
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429254
    reference: chr 10
allele count: 3
allele frequency: 2.48373155829318e-5
allele num: 120786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+34A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+34A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11195
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

10-127429259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429259
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429259
    reference: chr 10
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+39G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+39G>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22315
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

10-127429265-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429265
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429265
    reference: chr 10
allele count: 3
allele frequency: 2.487108487672232e-5
allele num: 120622
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2170+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*383+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.430+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2174+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1154+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2170+45A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2068+45A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4074
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-127429521-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429521
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429521
    reference: chr 10
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-49A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-49A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-127429522-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429522
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429522
    reference: chr 10
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-48T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-48T>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43117
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

10-127429523-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429523
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429523
    reference: chr 10
allele count: 1
allele frequency: 8.310617645103384e-6
allele num: 120328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-47T>C
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-47T>C
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8577
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

10-127429533-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429533
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429533
    reference: chr 10
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-37A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-37A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8565
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

10-127429543-TTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429543
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429540
    reference: chr 10
allele count: 1
allele frequency: 8.299168423323983e-6
allele num: 120494
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-20_2171-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-20_*1155-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-20_*384-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-20_431-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-20_2069-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-20_2175-18delTTC
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-20_2171-18delTTC
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TTTC
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

10-127429549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429549
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429549
    reference: chr 10
allele count: 76
allele frequency: 6.302974008525602e-4
allele num: 120578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-21C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-21C>T
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 10761
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8581
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 9.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 3
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

10-127429551-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429551
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429551
    reference: chr 10
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-19T>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-19T>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1981
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

10-127429552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429552
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429552
    reference: chr 10
allele count: 1
allele frequency: 8.290774026663129e-6
allele num: 120616
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-18C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-18C>T
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

10-127429555-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429555
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429555
    reference: chr 10
allele count: 2
allele frequency: 1.657138122462507e-5
allele num: 120690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-15T>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-15T>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-127429556-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429556
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429556
    reference: chr 10
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-14C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-14C>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/10-127429558-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429558
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429558
    reference: chr 10
allele count: 5
allele frequency: 4.14167853947848e-5
allele num: 120724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-12C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-12C>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 32262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

10-127429562-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429562
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429562
    reference: chr 10
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2069-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2171-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.431-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1155-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2171-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2175-8C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*384-8C>T
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2171-8C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-127429592-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429592
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429592
    reference: chr 10
allele count: 6
allele frequency: 4.950249987624375e-5
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.453C>A
  hgvsp: ENST00000368813.1:c.453C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*406C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2091C>A
  hgvsp: ENST00000337623.3:c.2091C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2197C>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2193C>A
  hgvsp: ENST00000419769.2:c.2193C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2193C>A
  hgvsp: ENST00000356792.4:c.2193C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1177C>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr731Thr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

10-127429592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429592
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429592
    reference: chr 10
allele count: 210
allele frequency: 1.732587495668531e-3
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*406C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1177C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2091C>T
  hgvsp: ENST00000337623.3:c.2091C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.453C>T
  hgvsp: ENST00000368813.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2193C>T
  hgvsp: ENST00000356792.4:c.2193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2193C>T
  hgvsp: ENST00000419769.2:c.2193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2197C>T
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32342
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44708
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8608
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr731Thr
num of homozygotes: 2
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

10-127429596-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429596
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429596
    reference: chr 10
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2095A>G
  hgvsp: ENSP00000336727.3:p.Met699Val
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2201A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*410A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2197A>G
  hgvsp: ENSP00000396544.2:p.Met733Val
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.457A>G
  hgvsp: ENSP00000357803.1:p.Met153Val
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2197A>G
  hgvsp: ENSP00000349244.4:p.Met733Val
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1181A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met733Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-127429598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429598
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429598
    reference: chr 10
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1183G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2097G>A
  hgvsp: ENSP00000336727.3:p.Met699Ile
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*412G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.459G>A
  hgvsp: ENSP00000357803.1:p.Met153Ile
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2199G>A
  hgvsp: ENSP00000349244.4:p.Met733Ile
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2199G>A
  hgvsp: ENSP00000396544.2:p.Met733Ile
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2203G>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8652
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met733Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

10-127429603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429603
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429603
    reference: chr 10
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2208C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1188C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*417C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2204C>T
  hgvsp: ENSP00000396544.2:p.Ser735Phe
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2204C>T
  hgvsp: ENSP00000349244.4:p.Ser735Phe
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.464C>T
  hgvsp: ENSP00000357803.1:p.Ser155Phe
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2102C>T
  hgvsp: ENSP00000336727.3:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser735Phe
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-127429604-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429604
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429604
    reference: chr 10
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2205C>G
  hgvsp: ENST00000356792.4:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.465C>G
  hgvsp: ENST00000368813.1:c.465C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2103C>G
  hgvsp: ENST00000337623.3:c.2103C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2209C>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1189C>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*418C>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2205C>G
  hgvsp: ENST00000419769.2:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser735Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

10-127429604-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429604
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429604
    reference: chr 10
allele count: 1991
allele frequency: 1.641493255944333e-2
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2205C>T
  hgvsp: ENST00000419769.2:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2103C>T
  hgvsp: ENST00000337623.3:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.465C>T
  hgvsp: ENST00000368813.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2205C>T
  hgvsp: ENST00000356792.4:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2209C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1189C>T
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*418C>T
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13468
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32408
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10785
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 1837
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser735Ser
num of homozygotes: 36
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

10-127429605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429605
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429605
    reference: chr 10
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2104G>A
  hgvsp: ENSP00000336727.3:p.Glu702Lys
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.466G>A
  hgvsp: ENSP00000357803.1:p.Glu156Lys
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1190G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2206G>A
  hgvsp: ENSP00000349244.4:p.Glu736Lys
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*419G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2206G>A
  hgvsp: ENSP00000396544.2:p.Glu736Lys
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2210G>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu736Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

10-127429610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429610
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429610
    reference: chr 10
allele count: 4
allele frequency: 3.295653033648617e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.471G>A
  hgvsp: ENST00000368813.1:c.471G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2211G>A
  hgvsp: ENST00000356792.4:c.2211G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2109G>A
  hgvsp: ENST00000337623.3:c.2109G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2215G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1195G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2211G>A
  hgvsp: ENST00000419769.2:c.2211G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*424G>A
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val737Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

10-127429613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429613
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429613
    reference: chr 10
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*427G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2214G>A
  hgvsp: ENST00000356792.4:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2218G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2112G>A
  hgvsp: ENST00000337623.3:c.2112G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2214G>A
  hgvsp: ENST00000419769.2:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1198G>A
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.474G>A
  hgvsp: ENST00000368813.1:c.474G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu738Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

10-127429627-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429627
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429627
    reference: chr 10
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2232A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2228A>G
  hgvsp: ENSP00000396544.2:p.Gln743Arg
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2228A>G
  hgvsp: ENSP00000349244.4:p.Gln743Arg
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*441A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.488A>G
  hgvsp: ENSP00000357803.1:p.Gln163Arg
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2126A>G
  hgvsp: ENSP00000336727.3:p.Gln709Arg
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1212A>G
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46378
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln743Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

10-127429628-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127429628
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 127429628
    reference: chr 10
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357805
  ensembl transcript: ENST00000368815
  gene symbol: EDRF1
  hgvsc: ENST00000368815.2:c.*442A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000396544
  ensembl transcript: ENST00000419769
  gene symbol: EDRF1
  hgvsc: ENST00000419769.2:c.2229A>G
  hgvsp: ENST00000419769.2:c.2229A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000349244
  ensembl transcript: ENST00000356792
  gene symbol: EDRF1
  hgvsc: ENST00000356792.4:c.2229A>G
  hgvsp: ENST00000356792.4:c.2229A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107938
  ensembl transcript: ENST00000525091
  gene symbol: EDRF1
  hgvsc: ENST00000525091.1:n.2233A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000431902
  ensembl transcript: ENST00000481600
  gene symbol: EDRF1
  hgvsc: ENST00000481600.1:c.*1213A>G
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000336727
  ensembl transcript: ENST00000337623
  gene symbol: EDRF1
  hgvsc: ENST00000337623.3:c.2127A>G
  hgvsp: ENST00000337623.3:c.2127A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107938
  ensembl protein: ENSP00000357803
  ensembl transcript: ENST00000368813
  gene symbol: EDRF1
  hgvsc: ENST00000368813.1:c.489A>G
  hgvsp: ENST00000368813.1:c.489A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24640
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln743Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-2155468-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155468
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155468
    reference: chr 11
allele count: 28
allele frequency: 8.176137359107633e-4
allele num: 34246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-573C>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-573C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-573C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-573C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-564C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-573C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-564C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-573C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-573C>G
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22183
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18671
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16384
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

11-2155475-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155475
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155475
    reference: chr 11
allele count: 1
allele frequency: 3.281701233919664e-5
allele num: 30472
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-580G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-580G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-571G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-580G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-571G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-580G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-580G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-580G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-580G>C
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

11-2155475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155475
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155475
    reference: chr 11
allele count: 46
allele frequency: 1.509582567603045e-3
allele num: 30472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-580G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-571G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-580G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-580G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-580G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-571G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-580G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-580G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-580G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 23226
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18928
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3320
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-2155476-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155476
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155476
    reference: chr 11
allele count: 1
allele frequency: 3.335112059765208e-5
allele num: 29984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-581C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-581C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22840
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-2155482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155482
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155482
    reference: chr 11
allele count: 1
allele frequency: 3.526341773044644e-5
allele num: 28358
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-587C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-587C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-578C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-578C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22435
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

11-2156551-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156551
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156551
    reference: chr 11
allele count: 2
allele frequency: 5.228484785109276e-5
allele num: 38252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+46A>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+46A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+46A>G
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29923
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20399
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6905
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

11-2156552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156552
    reference: chr 11
allele count: 1
allele frequency: 2.617801047120419e-5
allele num: 38200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+45G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+45G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+45G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13272
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7797
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6017
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21349
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

11-2156556-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156556
    reference: chr 11
allele count: 1
allele frequency: 2.554800470083287e-5
allele num: 39142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+41C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+41C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24133
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-2156565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156565
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156565
    reference: chr 11
allele count: 1
allele frequency: 2.387318563789152e-5
allele num: 41888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+32G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+32G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29031
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

11-2156579-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156579
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156579
    reference: chr 11
allele count: 11
allele frequency: 2.178562940663867e-4
allele num: 50492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+18G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+18G>C
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31607
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12040
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4845
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5001
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-2156582-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156582
    reference: chr 11
allele count: 3
allele frequency: 5.495713343591998e-5
allele num: 54588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+15G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+15G>C
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4610
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9939
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-2156582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156582
    reference: chr 11
allele count: 2
allele frequency: 3.663808895727999e-5
allele num: 54588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+15G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+15G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+15G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9939
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-2156584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156584
    reference: chr 11
allele count: 1
allele frequency: 1.774056202100482e-5
allele num: 56368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+13G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+13G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+13G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-2156586-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156586
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156584
    reference: chr 11
allele count: 1
allele frequency: 1.700853828621968e-5
allele num: 58794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*209+9_*209+10delCT
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.157+9_157+10delCT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.325+9_325+10delCT
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: CAG
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-2156601-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156601
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156601
    reference: chr 11
allele count: 1
allele frequency: 1.265662574357676e-5
allele num: 79010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.153C>T
  hgvsp: ENST00000381395.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*205C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.153C>T
  hgvsp: ENST00000381389.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.153C>T
  hgvsp: ENST00000416167.2:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.153C>T
  hgvsp: ENST00000381406.4:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.321C>T
  hgvsp: ENST00000434045.2:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.153C>T
  hgvsp: ENST00000418738.2:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.153C>T
  hgvsp: ENST00000300632.5:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.153C>T
  hgvsp: ENST00000381392.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6345
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2518
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20466
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr107Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-2156610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156610
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156610
    reference: chr 11
allele count: 1
allele frequency: 1.076727609449362e-5
allele num: 92874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.144C>T
  hgvsp: ENST00000381406.4:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.144C>T
  hgvsp: ENST00000418738.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.312C>T
  hgvsp: ENST00000434045.2:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.144C>T
  hgvsp: ENST00000381392.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.144C>T
  hgvsp: ENST00000416167.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*196C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.144C>T
  hgvsp: ENST00000300632.5:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.144C>T
  hgvsp: ENST00000381389.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.144C>T
  hgvsp: ENST00000381395.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg104Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-2156611-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156611
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156611
    reference: chr 11
allele count: 1
allele frequency: 1.06473594548552e-5
allele num: 93920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.143G>T
  hgvsp: ENSP00000402047.2:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.143G>T
  hgvsp: ENSP00000414497.2:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*195G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.311G>T
  hgvsp: ENSP00000391826.2:p.Arg104Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.143G>T
  hgvsp: ENSP00000370799.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.143G>T
  hgvsp: ENSP00000370796.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.143G>T
  hgvsp: ENSP00000300632.5:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.143G>T
  hgvsp: ENSP00000370802.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.143G>T
  hgvsp: ENSP00000370813.4:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg104Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-2156616-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156616
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156616
    reference: chr 11
allele count: 3
allele frequency: 2.972357079163777e-5
allele num: 100930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.138G>T
  hgvsp: ENST00000416167.2:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*190G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.138G>T
  hgvsp: ENST00000300632.5:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.306G>T
  hgvsp: ENST00000434045.2:c.306G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.138G>T
  hgvsp: ENST00000381406.4:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.138G>T
  hgvsp: ENST00000381392.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.138G>T
  hgvsp: ENST00000381395.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.138G>T
  hgvsp: ENST00000381389.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.138G>T
  hgvsp: ENST00000418738.2:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36671
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly102Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

11-2156622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156622
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156622
    reference: chr 11
allele count: 1
allele frequency: 9.458590291702925e-6
allele num: 105724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.132C>T
  hgvsp: ENST00000381395.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.300C>T
  hgvsp: ENST00000434045.2:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.132C>T
  hgvsp: ENST00000381392.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*184C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.132C>T
  hgvsp: ENST00000418738.2:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.132C>T
  hgvsp: ENST00000300632.5:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.132C>T
  hgvsp: ENST00000416167.2:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.132C>T
  hgvsp: ENST00000381389.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.132C>T
  hgvsp: ENST00000381406.4:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7746
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val100Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

11-2156624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156624
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156624
    reference: chr 11
allele count: 3
allele frequency: 2.799970133651908e-5
allele num: 107144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*182G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.130G>A
  hgvsp: ENSP00000402047.2:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.130G>A
  hgvsp: ENSP00000370813.4:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.298G>A
  hgvsp: ENSP00000391826.2:p.Val100Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.130G>A
  hgvsp: ENSP00000370796.1:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.130G>A
  hgvsp: ENSP00000370799.1:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.130G>A
  hgvsp: ENSP00000414497.2:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.130G>A
  hgvsp: ENSP00000370802.1:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.130G>A
  hgvsp: ENSP00000300632.5:p.Val44Ile
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38947
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val100Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-2156625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156625
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156625
    reference: chr 11
allele count: 8
allele frequency: 7.411250277921885e-5
allele num: 107944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.129C>T
  hgvsp: ENST00000416167.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.297C>T
  hgvsp: ENST00000434045.2:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.129C>T
  hgvsp: ENST00000381395.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.129C>T
  hgvsp: ENST00000381406.4:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*181C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.129C>T
  hgvsp: ENST00000418738.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.129C>T
  hgvsp: ENST00000300632.5:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.129C>T
  hgvsp: ENST00000381392.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.129C>T
  hgvsp: ENST00000381389.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39167
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6177
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe99Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

11-2156640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156640
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156640
    reference: chr 11
allele count: 1
allele frequency: 8.787346221441125e-6
allele num: 113800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.114G>A
  hgvsp: ENST00000381395.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.114G>A
  hgvsp: ENST00000300632.5:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.114G>A
  hgvsp: ENST00000418738.2:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.114G>A
  hgvsp: ENST00000416167.2:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.114G>A
  hgvsp: ENST00000381389.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.114G>A
  hgvsp: ENST00000381392.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*166G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.114G>A
  hgvsp: ENST00000381406.4:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.282G>A
  hgvsp: ENST00000434045.2:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val94Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

11-2156652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156652
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156652
    reference: chr 11
allele count: 1
allele frequency: 8.564870327863236e-6
allele num: 116756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.102C>T
  hgvsp: ENST00000418738.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.102C>T
  hgvsp: ENST00000300632.5:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.102C>T
  hgvsp: ENST00000381406.4:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.270C>T
  hgvsp: ENST00000434045.2:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.102C>T
  hgvsp: ENST00000381389.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.102C>T
  hgvsp: ENST00000416167.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.102C>T
  hgvsp: ENST00000381392.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*154C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.102C>T
  hgvsp: ENST00000381395.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly90Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

11-2156655-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156655
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156655
    reference: chr 11
allele count: 11
allele frequency: 9.350720005440419e-5
allele num: 117638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.99C>T
  hgvsp: ENST00000381392.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.99C>T
  hgvsp: ENST00000381395.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.99C>T
  hgvsp: ENST00000381389.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*151C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.267C>T
  hgvsp: ENST00000434045.2:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.99C>T
  hgvsp: ENST00000418738.2:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.99C>T
  hgvsp: ENST00000381406.4:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.99C>T
  hgvsp: ENST00000416167.2:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.99C>T
  hgvsp: ENST00000300632.5:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40819
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11968
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47028
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys89Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-2156695-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156695
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156695
    reference: chr 11
allele count: 11
allele frequency: 9.201324990798675e-5
allele num: 119548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.227C>T
  hgvsp: ENSP00000391826.2:p.Ser76Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*111C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.59C>T
  hgvsp: ENSP00000402047.2:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.59C>T
  hgvsp: ENSP00000414497.2:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.59C>T
  hgvsp: ENSP00000370796.1:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.59C>T
  hgvsp: ENSP00000370802.1:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.59C>T
  hgvsp: ENSP00000370799.1:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.59C>T
  hgvsp: ENSP00000370813.4:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.59C>T
  hgvsp: ENSP00000300632.5:p.Ser20Leu
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13400
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser76Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

11-2156695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156695
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156695
    reference: chr 11
allele count: 1
allele frequency: 8.364840900726069e-6
allele num: 119548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.59C>G
  hgvsp: ENSP00000370813.4:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.227C>G
  hgvsp: ENSP00000391826.2:p.Ser76Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.59C>G
  hgvsp: ENSP00000414497.2:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.59C>G
  hgvsp: ENSP00000370799.1:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*111C>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.59C>G
  hgvsp: ENSP00000402047.2:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.59C>G
  hgvsp: ENSP00000300632.5:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.59C>G
  hgvsp: ENSP00000370802.1:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.59C>G
  hgvsp: ENSP00000370796.1:p.Ser20Trp
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser76Trp
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

11-2156700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156700
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156700
    reference: chr 11
allele count: 3
allele frequency: 2.508528998595224e-5
allele num: 119592
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.222C>T
  hgvsp: ENST00000434045.2:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.54C>T
  hgvsp: ENST00000381389.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.54C>T
  hgvsp: ENST00000416167.2:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.54C>T
  hgvsp: ENST00000381392.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*106C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.54C>T
  hgvsp: ENST00000381406.4:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.54C>T
  hgvsp: ENST00000418738.2:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.54C>T
  hgvsp: ENST00000381395.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.54C>T
  hgvsp: ENST00000300632.5:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe74Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

11-2156711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156711
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156711
    reference: chr 11
allele count: 1
allele frequency: 8.356592515835743e-6
allele num: 119666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.43T>C
  hgvsp: ENSP00000370799.1:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.43T>C
  hgvsp: ENSP00000370813.4:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.43T>C
  hgvsp: ENSP00000300632.5:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.43T>C
  hgvsp: ENSP00000370802.1:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.43T>C
  hgvsp: ENSP00000414497.2:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*95T>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.43T>C
  hgvsp: ENSP00000370796.1:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.211T>C
  hgvsp: ENSP00000391826.2:p.Phe71Leu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.43T>C
  hgvsp: ENSP00000402047.2:p.Phe15Leu
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe71Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

11-2156712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156712
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156712
    reference: chr 11
allele count: 1
allele frequency: 8.357430591538938e-6
allele num: 119654
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.210C>T
  hgvsp: ENST00000434045.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.42C>T
  hgvsp: ENST00000416167.2:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.42C>T
  hgvsp: ENST00000418738.2:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.42C>T
  hgvsp: ENST00000381392.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.42C>T
  hgvsp: ENST00000300632.5:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*94C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.42C>T
  hgvsp: ENST00000381406.4:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.42C>T
  hgvsp: ENST00000381395.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.42C>T
  hgvsp: ENST00000381389.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr70Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-2156724-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156724
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156724
    reference: chr 11
allele count: 1
allele frequency: 8.370162046337218e-6
allele num: 119472
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.30G>C
  hgvsp: ENST00000381395.1:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.30G>C
  hgvsp: ENST00000300632.5:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.30G>C
  hgvsp: ENST00000418738.2:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.30G>C
  hgvsp: ENST00000381392.1:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.30G>C
  hgvsp: ENST00000416167.2:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.30G>C
  hgvsp: ENST00000381406.4:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*82G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.198G>C
  hgvsp: ENST00000434045.2:c.198G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.30G>C
  hgvsp: ENST00000381389.1:c.30G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu66Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-2156724-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156724
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156724
    reference: chr 11
allele count: 1
allele frequency: 8.370162046337218e-6
allele num: 119472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.30G>A
  hgvsp: ENST00000418738.2:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*82G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.30G>A
  hgvsp: ENST00000300632.5:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.30G>A
  hgvsp: ENST00000381406.4:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.30G>A
  hgvsp: ENST00000381395.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.30G>A
  hgvsp: ENST00000416167.2:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.198G>A
  hgvsp: ENST00000434045.2:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.30G>A
  hgvsp: ENST00000381392.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.30G>A
  hgvsp: ENST00000381389.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu66Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-2156730-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156730
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156730
    reference: chr 11
allele count: 2
allele frequency: 1.67549091883922e-5
allele num: 119368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.24G>A
  hgvsp: ENST00000381395.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.24G>A
  hgvsp: ENST00000416167.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.24G>A
  hgvsp: ENST00000381392.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.24G>A
  hgvsp: ENST00000418738.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*76G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.24G>A
  hgvsp: ENST00000381406.4:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.24G>A
  hgvsp: ENST00000381389.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.24G>A
  hgvsp: ENST00000300632.5:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.192G>A
  hgvsp: ENST00000434045.2:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser64Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-2156733-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156733
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156733
    reference: chr 11
allele count: 7
allele frequency: 5.868741406485798e-5
allele num: 119276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.21G>T
  hgvsp: ENSP00000370796.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.21G>T
  hgvsp: ENSP00000414497.2:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.21G>T
  hgvsp: ENSP00000370799.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.189G>T
  hgvsp: ENSP00000391826.2:p.Lys63Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.21G>T
  hgvsp: ENSP00000370813.4:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*73G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.21G>T
  hgvsp: ENSP00000402047.2:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.21G>T
  hgvsp: ENSP00000300632.5:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.21G>T
  hgvsp: ENSP00000370802.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40358
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys63Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

11-2156734-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156734
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156734
    reference: chr 11
allele count: 4
allele frequency: 3.354353951428955e-5
allele num: 119248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*72A>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.20A>C
  hgvsp: ENSP00000370799.1:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.20A>C
  hgvsp: ENSP00000370796.1:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.20A>C
  hgvsp: ENSP00000402047.2:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.188A>C
  hgvsp: ENSP00000391826.2:p.Lys63Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.20A>C
  hgvsp: ENSP00000300632.5:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.20A>C
  hgvsp: ENSP00000370813.4:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.20A>C
  hgvsp: ENSP00000414497.2:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.20A>C
  hgvsp: ENSP00000370802.1:p.Lys7Thr
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys63Thr
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-2156737-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156737
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156737
    reference: chr 11
allele count: 1
allele frequency: 8.393063971933595e-6
allele num: 119146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.17G>T
  hgvsp: ENSP00000370813.4:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.17G>T
  hgvsp: ENSP00000402047.2:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.17G>T
  hgvsp: ENSP00000300632.5:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.17G>T
  hgvsp: ENSP00000414497.2:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.17G>T
  hgvsp: ENSP00000370799.1:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.17G>T
  hgvsp: ENSP00000370796.1:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.185G>T
  hgvsp: ENSP00000391826.2:p.Gly62Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.17G>T
  hgvsp: ENSP00000370802.1:p.Gly6Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*69G>T
  variant of: http://identifiers.org/hgnc/33527
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly62Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/11-2156740-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156740
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156740
    reference: chr 11
allele count: 1
allele frequency: 8.40152571707022e-6
allele num: 119026
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.14T>G
  hgvsp: ENSP00000370802.1:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.14T>G
  hgvsp: ENSP00000402047.2:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*66T>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.14T>G
  hgvsp: ENSP00000370813.4:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.14T>G
  hgvsp: ENSP00000300632.5:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.182T>G
  hgvsp: ENSP00000391826.2:p.Met61Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.14T>G
  hgvsp: ENSP00000414497.2:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.14T>G
  hgvsp: ENSP00000370799.1:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.14T>G
  hgvsp: ENSP00000370796.1:p.Met5Arg
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met61Arg
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/11-2156749-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156749
    reference: chr 11
allele count: 1
allele frequency: 8.43198758811427e-6
allele num: 118596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*57G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.5G>T
  hgvsp: ENSP00000414497.2:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.5G>T
  hgvsp: ENSP00000300632.5:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.5G>T
  hgvsp: ENSP00000370799.1:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.5G>T
  hgvsp: ENSP00000370802.1:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.5G>T
  hgvsp: ENSP00000370796.1:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.173G>T
  hgvsp: ENSP00000391826.2:p.Gly58Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.5G>T
  hgvsp: ENSP00000402047.2:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.5G>T
  hgvsp: ENSP00000370813.4:p.Gly2Val
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly58Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

11-2156749-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2156749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2156749
    reference: chr 11
allele count: 5
allele frequency: 4.215993794057135e-5
allele num: 118596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.5G>A
  hgvsp: ENSP00000402047.2:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.5G>A
  hgvsp: ENSP00000370796.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.5G>A
  hgvsp: ENSP00000370799.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.5G>A
  hgvsp: ENSP00000370813.4:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.173G>A
  hgvsp: ENSP00000391826.2:p.Gly58Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.5G>A
  hgvsp: ENSP00000370802.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*57G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.5G>A
  hgvsp: ENSP00000300632.5:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.5G>A
  hgvsp: ENSP00000414497.2:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly58Glu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4142
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28088
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.255e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 2.079e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -5.012e-1

DP
type: SiteQuality
SIO_000300: 2.024498e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

QD
type: SiteQuality
SIO_000300: 1.46e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28043
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.779e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.277e0

DP
type: SiteQuality
SIO_000300: 2.023583e6

VQSLOD
type: SiteQuality
SIO_000300: 4.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.02e-1

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11198
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.464403256539061e-4
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502070952638214e-5
allele num: 66636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.231e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 3.838e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.021646e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.758e0

GenotypeQuality
all individuals: 27563
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.824e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

QD
type: SiteQuality
SIO_000300: 1.674e1

FS
type: SiteQuality
SIO_000300: 5.309e0

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.927e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.015679e6

GenotypeQuality
all individuals: 1513
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11195
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7261
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4110
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.145e1

MQ
type: SiteQuality
SIO_000300: 5.899e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.977e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e0

DP
type: SiteQuality
SIO_000300: 2.008335e6

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25525
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11195
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

DP
type: SiteQuality
SIO_000300: 1.995094e6

QD
type: SiteQuality
SIO_000300: 1.459e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819505094614265e-4
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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Latino
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allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.62e-1

InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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SIO_000300: 5.600000000000001e-1

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.066488716330988e-5
allele num: 16484
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.038e0

VQSLOD
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ClippingRankSum
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11502
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.820167455405897e-4
allele num: 16482
num of homozygotes: 0

FS
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DP
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MQ
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SIO_000300: 5.97e1

MQRankSum
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SIO_000300: 3.73e-1

InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: -2.36e-1

ClippingRankSum
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SIO_000300: 8.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.833e0

ReadPosRankSum
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SIO_000300: 1.17e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.786e0

DP
type: SiteQuality
SIO_000300: 1.729697e6

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.599e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.510026576467746e-5
allele num: 66224
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African
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allele frequency: 0.0e0
allele num: 9866
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VQSLOD
type: SiteQuality
SIO_000300: -5.884e-1

ReadPosRankSum
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DP
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QD
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
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BaseQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50879628232596e-5
allele num: 66278
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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MQRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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MQ
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SIO_000300: 5.901e1

ClippingRankSum
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ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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African
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allele frequency: 1.006238679814852e-4
allele num: 9938
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Other
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South Asian
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66312
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 6612
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Other
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allele num: 906
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African
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South Asian
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allele num: 16508
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East Asian
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European (Non-Finnish)
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allele frequency: 1.507249871883761e-5
allele num: 66346
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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VQSLOD
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QD
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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FS
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

Latino
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African
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East Asian
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European (Finnish)
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Other
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South Asian
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507022725902707e-5
allele num: 66356
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.075e0

QD
type: SiteQuality
SIO_000300: 1.161e1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.745e0

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 1.733467e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8590
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01331886940276e-5
allele num: 66372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.682e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.525e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 8.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.94e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 1
allele frequency: 9.934432743890324e-5
allele num: 10066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

FS
type: SiteQuality
SIO_000300: 8.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.57e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.579e0

DP
type: SiteQuality
SIO_000300: 1.734583e6

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.531708492754496e-5
allele num: 66386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.19e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 1.735039e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 2159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8590
bin: 6.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506114826194349e-5
allele num: 66396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.154e0

DP
type: SiteQuality
SIO_000300: 1.735011e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.25e0

VQSLOD
type: SiteQuality
SIO_000300: -2.355e-1

FS
type: SiteQuality
SIO_000300: 4.456e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 8608
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

QD
type: SiteQuality
SIO_000300: 1.356e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.742e0

VQSLOD
type: SiteQuality
SIO_000300: 5.62e0

DP
type: SiteQuality
SIO_000300: 1.765268e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 208

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 6.045949214026602e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 203
allele frequency: 1.96972637298661e-2
allele num: 10306
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.28e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.742e0

DP
type: SiteQuality
SIO_000300: 1.765268e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.62e0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

QD
type: SiteQuality
SIO_000300: 1.464e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.547e0

ReadPosRankSum
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 732
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 1.731392e6

VQSLOD
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.252e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

GenotypeQuality
all individuals: 1977
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44847
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 6.47e0

QD
type: SiteQuality
SIO_000300: 1.243e1

DP
type: SiteQuality
SIO_000300: 1.9732e6

GenotypeQuality
all individuals: 8628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 9.75e1
variant carriers: 1954

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44847
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 256
allele frequency: 1.550575408843125e-2
allele num: 16510
num of homozygotes: 9

European (Non-Finnish)
type: Population
allele count: 1526
allele frequency: 2.288473651060256e-2
allele num: 66682
num of homozygotes: 25

Other
type: Population
allele count: 9
allele frequency: 9.933774834437087e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 97
allele frequency: 1.46658602963411e-2
allele num: 6614
num of homozygotes: 1

Latino
type: Population
allele count: 77
allele frequency: 6.650544135429262e-3
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.512562814070352e-3
allele num: 10348
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

VQSLOD
type: SiteQuality
SIO_000300: 6.47e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

DP
type: SiteQuality
SIO_000300: 1.9732e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

DP
type: SiteQuality
SIO_000300: 1.652339e6

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.987e1

QD
type: SiteQuality
SIO_000300: 1.213e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 6.54e0

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46358
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
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variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99538355466291e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.035e0

DP
type: SiteQuality
SIO_000300: 1.652945e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 1.122e1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.652978e6

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.212e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.886e0

GenotypeQuality
all individuals: 177
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

FS
type: SiteQuality
SIO_000300: 2.627e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

DP
type: SiteQuality
SIO_000300: 1.652677e6

QD
type: SiteQuality
SIO_000300: 1.223e1

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeQuality
all individuals: 46380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.125e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.382e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.79e-1

DP
type: SiteQuality
SIO_000300: 1.65268e6

GenotypeQuality
all individuals: 1461
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 970
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 456
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
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variant carriers: 0

GenotypeQuality
all individuals: 22348
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3530
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4754
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 408
bin: 7.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 6.692160611854685e-3
allele num: 4184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.42e-2

DP
type: SiteQuality
SIO_000300: 5.87859e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

FS
type: SiteQuality
SIO_000300: 8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.295e1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
all individuals: 12487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
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GenotypeQuality
all individuals: 1466
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 2.5e0
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GenotypeQuality
all individuals: 3320
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4862
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.147962830593281e-5
allele num: 13990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2438
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.02e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.6033e5

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 4

GenotypeQuality
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bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 3

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 44

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12487
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13990
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.412429378531073e-3
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 1.170046801872075e-2
allele num: 3846
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.02e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 5.6033e5

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.30033581544751e-5
allele num: 13698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.154e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.212e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.84e-2

DP
type: SiteQuality
SIO_000300: 5.56657e5

QD
type: SiteQuality
SIO_000300: 1.15e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2194
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.183e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 1.138e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

QD
type: SiteQuality
SIO_000300: 2.616e1

DP
type: SiteQuality
SIO_000300: 5.45077e5

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.314063848144953e-4
allele num: 2318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4176
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.924557351809084e-4
allele num: 5196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.07e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.681e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

DP
type: SiteQuality
SIO_000300: 5.72375e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 2.336e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.938735944164405e-4
allele num: 5158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.79e-2

DP
type: SiteQuality
SIO_000300: 5.7532e5

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.03e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

VQSLOD
type: SiteQuality
SIO_000300: 7.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.359603586597452e-4
allele num: 4238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.511e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.102e0

MQ
type: SiteQuality
SIO_000300: 5.801e1

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

FS
type: SiteQuality
SIO_000300: 3.245e0

DP
type: SiteQuality
SIO_000300: 5.90737e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 1.052e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1299
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3130
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.239140170174653e-4
allele num: 4466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24070
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

VQSLOD
type: SiteQuality
SIO_000300: -2.037e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

QD
type: SiteQuality
SIO_000300: 1.463e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

DP
type: SiteQuality
SIO_000300: 6.31209e5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 2.16791486007095e-3
allele num: 5074
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.33832e5

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1305
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variant carriers: 3

GenotypeQuality
all individuals: 275
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GenotypeQuality
all individuals: 148
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 9.6980668520075e-5
allele num: 30934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4422
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

DP
type: SiteQuality
SIO_000300: 7.66607e5

MQRankSum
type: SiteQuality
SIO_000300: -2.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.313e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.529999999999999e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.465377901338333e-5
allele num: 30934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.66607e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.313e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 8.529999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.649708532061473e-4
allele num: 3774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2474
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31918
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

FS
type: SiteQuality
SIO_000300: 1.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.093e0

QD
type: SiteQuality
SIO_000300: 1.627e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.86459e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.011866755014758e-5
allele num: 33202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

DP
type: SiteQuality
SIO_000300: 8.10846e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQ
type: SiteQuality
SIO_000300: 6.032e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.82e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

GenotypeQuality
all individuals: 1307
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.911067545891998e-5
allele num: 11222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.452e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 1.004333e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 2.416626389560174e-4
allele num: 4138
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6682
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.357e0

QD
type: SiteQuality
SIO_000300: 9.91e0

ReadPosRankSum
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SIO_000300: 2.15e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

FS
type: SiteQuality
SIO_000300: 2.607e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.14127e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.912411550965768e-5
allele num: 52290
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.611e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.153988e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.570790930191037e-5
allele num: 56010
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.362397820163488e-3
allele num: 734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4656
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.404e0

DP
type: SiteQuality
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.709051134809954e-5
allele num: 58512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1322
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 1
allele frequency: 6.694336591243807e-5
allele num: 14938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.37689528247729e-5
allele num: 59226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.427e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 1.285701e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

QD
type: SiteQuality
SIO_000300: 9.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.910670527957229e-4
allele num: 8978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5114
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.462e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 1.295694e6

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 640
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.193887297039159e-4
allele num: 8376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62560
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.154e0

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 6.463e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.553e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.68e-1

DP
type: SiteQuality
SIO_000300: 1.363256e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.08e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.017915309446254e-4
allele num: 9824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.404563e6

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.84e0

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

GenotypeQuality
all individuals: 271
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550724188195888e-5
allele num: 64486
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.173708920187793e-3
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.006036217303823e-4
allele num: 9940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.058103975535168e-4
allele num: 16350
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.497318722312894e-4
allele num: 8578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.103e1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 1.419806e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.59e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.527370478983382e-4
allele num: 65472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.447695e6

QD
type: SiteQuality
SIO_000300: 1.125e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.825112988799372e-5
allele num: 10178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.125e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

DP
type: SiteQuality
SIO_000300: 1.447695e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52699731248473e-5
allele num: 65488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.811616954474098e-5
allele num: 10192
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.448202e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.819e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 1338
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.449026e6

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 7.052e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526065193505067e-5
allele num: 65528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.547e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.449056e6

FS
type: SiteQuality
SIO_000300: 1.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
SIO_000300: 7.18e0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 1162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527650473571647e-5
allele num: 65460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.445351e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 2.477e0

QD
type: SiteQuality
SIO_000300: 7.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.068e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.41e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527650473571647e-5
allele num: 65460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.477e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

DP
type: SiteQuality
SIO_000300: 1.445351e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.068e-1

QD
type: SiteQuality
SIO_000300: 7.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

GenotypeQuality
all individuals: 1153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 161
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 209
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GenotypeQuality
all individuals: 1305
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GenotypeQuality
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GenotypeQuality
all individuals: 220
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GenotypeQuality
all individuals: 1338
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5058
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48533
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.809691975671964e-5
allele num: 10194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528864970645792e-5
allele num: 65408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

FS
type: SiteQuality
SIO_000300: 8.300000000000001e0

DP
type: SiteQuality
SIO_000300: 1.442457e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.043e1

GenotypeQuality
all individuals: 220
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 1342
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5045
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variant carriers: 0

GenotypeQuality
all individuals: 211
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 182
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.070631060536539e-4
allele num: 65382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 1.132e0

QD
type: SiteQuality
SIO_000300: 1.178e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.04e-1

DP
type: SiteQuality
SIO_000300: 1.440464e6

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 555
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variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.471017007983339e-4
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.465e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

DP
type: SiteQuality
SIO_000300: 1.439344e6

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65340
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16370808678501e-5
allele num: 16224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.45e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.68e0

FS
type: SiteQuality
SIO_000300: 4.962e0

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.437861e6

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

MQ
type: SiteQuality
SIO_000300: 5.914e1

GenotypeQuality
all individuals: 241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
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GenotypeQuality
all individuals: 107
bin: 5.75e1
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GenotypeQuality
all individuals: 1139
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variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530924678505817e-5
allele num: 65320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.03e-1

FS
type: SiteQuality
SIO_000300: 3.745e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.186e0

QD
type: SiteQuality
SIO_000300: 1.676e1

DP
type: SiteQuality
SIO_000300: 1.435245e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.846396218983852e-5
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.306e0

QD
type: SiteQuality
SIO_000300: 1.044e1

DP
type: SiteQuality
SIO_000300: 1.424782e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.115e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0