11-102207874-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102207874
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102207874
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 25722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000023445
  ensembl protein: ENSP00000432907
  ensembl transcript: ENST00000532808
  gene symbol: BIRC3
  hgvsc: ENST00000532808.1:c.*41T>A
  variant of: http://identifiers.org/hgnc/591
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000023445
  ensembl transcript: ENST00000527336
  gene symbol: BIRC3
  hgvsc: ENST00000527336.1:n.516T>A
  variant of: http://identifiers.org/hgnc/591
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000023445
  ensembl protein: ENSP00000263464
  ensembl transcript: ENST00000263464
  gene symbol: BIRC3
  hgvsc: ENST00000263464.3:c.*41T>A
  variant of: http://identifiers.org/hgnc/591
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22016
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22514
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

11-102207875-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102207875
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102207875
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 25728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000023445
  ensembl protein: ENSP00000432907
  ensembl transcript: ENST00000532808
  gene symbol: BIRC3
  hgvsc: ENST00000532808.1:c.*42T>A
  variant of: http://identifiers.org/hgnc/591
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000023445
  ensembl transcript: ENST00000527336
  gene symbol: BIRC3
  hgvsc: ENST00000527336.1:n.517T>A
  variant of: http://identifiers.org/hgnc/591
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000023445
  ensembl protein: ENSP00000263464
  ensembl transcript: ENST00000263464
  gene symbol: BIRC3
  hgvsc: ENST00000263464.3:c.*42T>A
  variant of: http://identifiers.org/hgnc/591
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22027
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22579
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6110
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-102219388-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102219388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102219388
    reference: chr 11
allele count: 1
allele frequency: 1.340123291342804e-4
allele num: 7462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+1281A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.220A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-2+1281A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+1281A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-1198A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-1221A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-148A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527808
  gene symbol: BIRC2
  hgvsc: ENST00000527808.1:n.353A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.532A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

11-102219392-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102219392
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102219392
    reference: chr 11
allele count: 1
allele frequency: 1.337613697164259e-4
allele num: 7476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+1285T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-1194T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-144T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-1217T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527808
  gene symbol: BIRC2
  hgvsc: ENST00000527808.1:n.357T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+1285T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.-42T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.224T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.536T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-2+1285T>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS

11-102219406-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102219406
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102219404
    reference: chr 11
allele count: 7
allele frequency: 9.227524387028737e-4
allele num: 7586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-1201_-40-1200delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.-26_-25delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+1301_-30+1302delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-128_-127delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.240_241delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-1178_-1177delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+1301_-20+1302delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527808
  gene symbol: BIRC2
  hgvsc: ENST00000527808.1:n.373_374delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-2+1301_-2+1302delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.552_553delTT
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: CTT
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-102219473-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102219473
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102219473
    reference: chr 11
allele count: 1
allele frequency: 1.199040767386091e-4
allele num: 8340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-1259A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-63A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-1136A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+1366A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-1113A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.617A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.305A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527808
  gene symbol: BIRC2
  hgvsc: ENST00000527808.1:n.438A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.17+23A>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+1366A>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-102220556-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220556
    reference: chr 11
allele count: 1
allele frequency: 9.070788432930591e-6
allele num: 110244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-176T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1700T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-30T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-53T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-176T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-521T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2449T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2449T>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-53T>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

11-102220556-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220556
    reference: chr 11
allele count: 1
allele frequency: 9.070788432930591e-6
allele num: 110244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-176T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-521T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-30T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2449T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2449T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1700T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-176T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-53T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-53T>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5026
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

11-102220560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220560
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220560
    reference: chr 11
allele count: 1
allele frequency: 9.063389345079487e-6
allele num: 110334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-172C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-172C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-26C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2453C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-49C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1704C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-517C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-49C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2453C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-102220562-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220562
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220562
    reference: chr 11
allele count: 173
allele frequency: 1.566291239633506e-3
allele num: 110452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-515A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-47A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-170A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2455A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-47A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-170A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1706A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2455A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 8.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 3
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

11-102220564-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220564
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220564
    reference: chr 11
allele count: 1
allele frequency: 9.047153765425397e-6
allele num: 110532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-45C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-513C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1708C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2457C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-168C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2457C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-22C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-168C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-45C>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36816
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-102220573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220573
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220573
    reference: chr 11
allele count: 1
allele frequency: 9.007061536244416e-6
allele num: 111024
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-13C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2466C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-36C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1717C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-159C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2466C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-504C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-159C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-36C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

11-102220585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220585
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220585
    reference: chr 11
allele count: 1
allele frequency: 8.91392711973187e-6
allele num: 112184
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2478C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-147C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-147C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-24C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2478C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1729C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-492C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-24C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5637
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-102220587-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220587
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220587
    reference: chr 11
allele count: 1
allele frequency: 8.894739650970415e-6
allele num: 112426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-145T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-22T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2480T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-490T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-22T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1731T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-145T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2480T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.2T>G
  hgvsp: ENSP00000227758.2:p.Met1?
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36819
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

11-102220588-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220588
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220588
    reference: chr 11
allele count: 2
allele frequency: 1.777967427636726e-5
allele num: 112488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1732G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2481G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-144G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.3G>T
  hgvsp: ENSP00000227758.2:p.Met1?
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-21G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-21G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-144G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-489G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2481G>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36821
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-102220591-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220591
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220591
    reference: chr 11
allele count: 4
allele frequency: 3.543460543566847e-5
allele num: 112884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-141C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.6C>G
  hgvsp: ENSP00000227758.2:p.His2Gln
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-486C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2484C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-141C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1735C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-18C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2484C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-18C>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His2Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

11-102220598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220598
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220598
    reference: chr 11
allele count: 9
allele frequency: 7.908055672711936e-5
allele num: 113808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2491G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.13G>A
  hgvsp: ENSP00000227758.2:p.Ala5Thr
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1742G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-479G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-11G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2491G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-11G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-134G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-134G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala5Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

11-102220603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220603
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220603
    reference: chr 11
allele count: 1
allele frequency: 8.722350150024422e-6
allele num: 114648
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.18C>T
  hgvsp: ENST00000227758.2:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2496C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-40-6C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-40-6C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-474C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-129C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1747C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-129C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2496C>T
  variant of: http://identifiers.org/hgnc/590
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 7.25e1
  variant carriers: 0
hgvs: c.-40-6C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS

11-102220610-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220610
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220608
    reference: chr 11
allele count: 1
allele frequency: 8.633789197402956e-6
allele num: 115824
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-119_328-118delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-464_18-463delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1757_1758delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-36_-35delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-119_-1-118delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2506_-30+2507delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.28_29delTT
  hgvsp: ENSP00000227758.2:p.Phe10ProfsTer9
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2506_-20+2507delTT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-36_-35delTT
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36820
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe10ProfsTer9
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: CTT
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

11-102220611-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220611
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220611
    reference: chr 11
allele count: 6
allele frequency: 5.170898185014737e-5
allele num: 116034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-466T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-38T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2504T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-38T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-121T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.26T>G
  hgvsp: ENSP00000227758.2:p.Leu9Arg
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1755T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2504T>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-121T>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu9Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-102220616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220616
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220616
    reference: chr 11
allele count: 3
allele frequency: 2.571487348282246e-5
allele num: 116664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1760C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-461C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2509C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.31C>T
  hgvsp: ENSP00000227758.2:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2509C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-116C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-116C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro11Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-102220616-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220616
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220616
    reference: chr 11
allele count: 1
allele frequency: 8.571624494274155e-6
allele num: 116664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-116C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.31C>G
  hgvsp: ENSP00000227758.2:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1760C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2509C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2509C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-33C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-33C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-461C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-116C>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro11Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-102220617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220617
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220617
    reference: chr 11
allele count: 1
allele frequency: 8.560764305037153e-6
allele num: 116812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2510C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-115C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-115C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.32C>T
  hgvsp: ENSP00000227758.2:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2510C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1761C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-460C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro11Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-102220619-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220619
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220619
    reference: chr 11
allele count: 1
allele frequency: 8.534316486592589e-6
allele num: 117174
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.34G>T
  hgvsp: ENSP00000227758.2:p.Gly12Cys
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1763G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-113G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-30G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2512G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-113G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-30G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-458G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2512G>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly12Cys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

11-102220619-GGTCCCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220619
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220612
    reference: chr 11
allele count: 2
allele frequency: 1.706863297318518e-5
allele num: 117174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1766_1772delCCCTCGT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-27_-21delCCCTCGT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.37_43delCCCTCGT
  hgvsp: ENSP00000227758.2:p.Pro13IlefsTer7
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-27_-21delCCCTCGT
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36822
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro13IlefsTer7
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: GGTCCCTC
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

11-102220626-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220626
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220626
    reference: chr 11
allele count: 4
allele frequency: 3.380205516495403e-5
allele num: 118336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-106C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.41C>T
  hgvsp: ENSP00000227758.2:p.Ser14Leu
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1770C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-106C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2519C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-451C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2519C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2841
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser14Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

11-102220626-CGTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220626
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220623
    reference: chr 11
allele count: 1
allele frequency: 8.450513791238508e-6
allele num: 118336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2520_-30+2522delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-450_18-448delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-22_-20delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-22_-20delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.42_44delGTA
  hgvsp: ENSP00000227758.2:p.Tyr15del
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-105_-1-103delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2520_-20+2522delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1771_1773delGTA
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-105_328-103delGTA
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8258
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr15del
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: CGTA
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-102220627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220627
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220627
    reference: chr 11
allele count: 1
allele frequency: 8.426303549159055e-6
allele num: 118676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2520G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.42G>A
  hgvsp: ENST00000227758.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1771G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2520G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-105G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-450G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-105G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser14Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

11-102220631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220631
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220631
    reference: chr 11
allele count: 1
allele frequency: 8.376331836762046e-6
allele num: 119384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.46C>T
  hgvsp: ENSP00000227758.2:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-101C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-101C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1775C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-446C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2524C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2524C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36821
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln16Ter
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

11-102220632-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220632
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220632
    reference: chr 11
allele count: 2
allele frequency: 1.671961210499916e-5
allele num: 119620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-445A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2525A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-100A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-17A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.47A>G
  hgvsp: ENSP00000227758.2:p.Gln16Arg
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2525A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-17A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-100A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1776A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36821
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln16Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

11-102220637-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220637
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220637
    reference: chr 11
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-440A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.52A>G
  hgvsp: ENSP00000227758.2:p.Ile18Val
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-95A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-95A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2530A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1781A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2530A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile18Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

11-102220642-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220642
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220642
    reference: chr 11
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2535G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-90G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.57G>A
  hgvsp: ENST00000227758.2:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-90G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2535G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-435G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1786G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys19Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-102220660-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220660
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220660
    reference: chr 11
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-72C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-417C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2553C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.75C>T
  hgvsp: ENST00000227758.2:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.12C>T
  hgvsp: ENST00000527465.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2553C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.12C>T
  hgvsp: ENST00000532672.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-72C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1804C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser25Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-102220661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220661
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220661
    reference: chr 11
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-71A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-416A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1805A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.13A>G
  hgvsp: ENSP00000434979.1:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2554A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.13A>G
  hgvsp: ENSP00000434708.1:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.76A>G
  hgvsp: ENSP00000227758.2:p.Thr26Ala
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-71A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2554A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr26Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

11-102220662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220662
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220662
    reference: chr 11
allele count: 3
allele frequency: 2.475002475002475e-5
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-70C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1806C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.14C>T
  hgvsp: ENSP00000434979.1:p.Thr5Met
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.77C>T
  hgvsp: ENSP00000227758.2:p.Thr26Met
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2555C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-70C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.14C>T
  hgvsp: ENSP00000434708.1:p.Thr5Met
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2555C>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-415C>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr26Met
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

11-102220663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220663
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220663
    reference: chr 11
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-69G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.15G>A
  hgvsp: ENST00000532672.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-69G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.15G>A
  hgvsp: ENST00000527465.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1807G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2556G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.78G>A
  hgvsp: ENST00000227758.2:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-414G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2556G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr26Thr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

11-102220665-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220665
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220665
    reference: chr 11
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-67T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2558T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2558T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-412T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1809T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.17T>C
  hgvsp: ENSP00000434979.1:p.Ile6Thr
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-67T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.80T>C
  hgvsp: ENSP00000227758.2:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.17T>C
  hgvsp: ENSP00000434708.1:p.Ile6Thr
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36826
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile27Thr
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-102220668-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220668
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220668
    reference: chr 11
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-409T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.20T>C
  hgvsp: ENSP00000434708.1:p.Leu7Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2561T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-64T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2561T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.83T>C
  hgvsp: ENSP00000227758.2:p.Leu28Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1812T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-64T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.20T>C
  hgvsp: ENSP00000434979.1:p.Leu7Ser
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu28Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

11-102220684-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220684
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220684
    reference: chr 11
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2577C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1828C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-393C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.36C>G
  hgvsp: ENSP00000434708.1:p.Asn12Lys
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-48C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.36C>G
  hgvsp: ENSP00000434979.1:p.Asn12Lys
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.99C>G
  hgvsp: ENSP00000227758.2:p.Asn33Lys
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2577C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-48C>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn33Lys
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-102220686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220686
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220686
    reference: chr 11
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.101G>A
  hgvsp: ENSP00000227758.2:p.Ser34Asn
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.38G>A
  hgvsp: ENSP00000434979.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2579G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1830G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.38G>A
  hgvsp: ENSP00000434708.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-46G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-391G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-46G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2579G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser34Asn
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

11-102220686-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220686
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220686
    reference: chr 11
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1830G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-46G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-46G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2579G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.38G>T
  hgvsp: ENSP00000434708.1:p.Ser13Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-391G>T
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.38G>T
  hgvsp: ENSP00000434979.1:p.Ser13Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.101G>T
  hgvsp: ENSP00000227758.2:p.Ser34Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2579G>T
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36826
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser34Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS

11-102220689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220689
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220689
    reference: chr 11
allele count: 12
allele frequency: 9.885493038965319e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.41A>G
  hgvsp: ENSP00000434979.1:p.Asn14Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-43A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.41A>G
  hgvsp: ENSP00000434708.1:p.Asn14Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.104A>G
  hgvsp: ENSP00000227758.2:p.Asn35Ser
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1833A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2582A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-388A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2582A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-43A>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn35Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

11-102220693-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220693
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220693
    reference: chr 11
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1837A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-39A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2586A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.45A>G
  hgvsp: ENST00000532672.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.108A>G
  hgvsp: ENST00000227758.2:c.108A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2586A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-39A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-384A>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.45A>G
  hgvsp: ENST00000527465.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36826
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys36Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-102220694-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220694
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220694
    reference: chr 11
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.46C>G
  hgvsp: ENSP00000434708.1:p.Gln16Glu
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-38C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2587C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-383C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.109C>G
  hgvsp: ENSP00000227758.2:p.Gln37Glu
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.46C>G
  hgvsp: ENSP00000434979.1:p.Gln16Glu
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-38C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2587C>G
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1838C>G
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln37Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

11-102220702-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220702
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220702
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.54G>C
  hgvsp: ENSP00000434979.1:p.Met18Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1846G>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-30G>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2595G>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.54G>C
  hgvsp: ENSP00000434708.1:p.Met18Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2595G>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-375G>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.117G>C
  hgvsp: ENSP00000227758.2:p.Met39Ile
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-30G>C
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met39Ile
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

11-102220705-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220705
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220705
    reference: chr 11
allele count: 45
allele frequency: 3.706815598280038e-4
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.120G>A
  hgvsp: ENST00000227758.2:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1849G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2598G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-27G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2598G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.57G>A
  hgvsp: ENST00000527465.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.57G>A
  hgvsp: ENST00000532672.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-27G>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-372G>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 9.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys40Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

11-102220714-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220714
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220714
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-363T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2607T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.66T>C
  hgvsp: ENST00000532672.1:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.129T>C
  hgvsp: ENST00000227758.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-18T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434557
  ensembl transcript: ENST00000528344
  gene symbol: BIRC2
  hgvsc: ENST00000528344.1:c.9T>C
  hgvsp: ENST00000528344.1:c.9T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.66T>C
  hgvsp: ENST00000527465.1:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1858T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-18T>C
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2607T>C
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe43Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/11-102220717-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102220717
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 102220717
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000436741
  ensembl transcript: ENST00000531259
  gene symbol: BIRC2
  hgvsc: ENST00000531259.1:c.-30+2610C>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434979
  ensembl transcript: ENST00000532672
  gene symbol: BIRC2
  hgvsc: ENST00000532672.1:c.69C>A
  hgvsp: ENST00000532672.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000431723
  ensembl transcript: ENST00000530675
  gene symbol: BIRC2
  hgvsc: ENST00000530675.1:c.-1-15C>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000227758
  ensembl transcript: ENST00000227758
  gene symbol: BIRC2
  hgvsc: ENST00000227758.2:c.132C>A
  hgvsp: ENST00000227758.2:c.132C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000534646
  gene symbol: BIRC2
  hgvsc: ENST00000534646.1:n.328-15C>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110330
  ensembl transcript: ENST00000527910
  gene symbol: BIRC2
  hgvsc: ENST00000527910.1:n.1861C>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434557
  ensembl transcript: ENST00000528344
  gene symbol: BIRC2
  hgvsc: ENST00000528344.1:c.12C>A
  hgvsp: ENST00000528344.1:c.12C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000434708
  ensembl transcript: ENST00000527465
  gene symbol: BIRC2
  hgvsc: ENST00000527465.1:c.69C>A
  hgvsp: ENST00000527465.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000432410
  ensembl transcript: ENST00000532832
  gene symbol: BIRC2
  hgvsc: ENST00000532832.1:c.18-360C>A
  variant of: http://identifiers.org/hgnc/590
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110330
  ensembl protein: ENSP00000433851
  ensembl transcript: ENST00000533742
  gene symbol: BIRC2
  hgvsc: ENST00000533742.1:c.-20+2610C>A
  variant of: http://identifiers.org/hgnc/590
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser44Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

15-90276214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276214
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276214
    reference: chr 15
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-107G>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.482-23G>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1331-23G>A
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4888
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38780
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

15-90276218-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276218
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276218
    reference: chr 15
allele count: 1568
allele frequency: 1.341478021319919e-2
allele num: 116886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.482-19G>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-103G>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1331-19G>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 17615
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24431
  bin: 2.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.75e1
  variant carriers: 1181
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 9.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 7.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 38586
  bin: 6.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 9.75e1
  variant carriers: 1066
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 7.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 8.75e1
  variant carriers: 33
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

15-90276226-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276226
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276226
    reference: chr 15
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-95A>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1331-11A>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.482-11A>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40942
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

15-90276226-A-ACTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276226
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276229
    reference: chr 15
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: ACTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.482-10_482-8dupCTT
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-94_1331-92dupCTT
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1331-10_1331-8dupCTT
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/15-90276227-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276227
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276227
    reference: chr 15
allele count: 2
allele frequency: 1.654889370645572e-5
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-94C>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.482-10C>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1331-10C>A
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9649
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

15-90276245-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276245
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276245
    reference: chr 15
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.490C>G
  hgvsp: ENSP00000403871.2:p.Leu164Val
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1339C>G
  hgvsp: ENSP00000268130.7:p.Leu447Val
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-76C>G
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41406
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu447Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

15-90276250-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276250
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276250
    reference: chr 15
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1344G>T
  hgvsp: ENST00000268130.7:c.1344G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.495G>T
  hgvsp: ENST00000444934.2:c.495G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-71G>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41505
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly448Gly
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

15-90276253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276253
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276253
    reference: chr 15
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.498C>T
  hgvsp: ENST00000444934.2:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1347C>T
  hgvsp: ENST00000268130.7:c.1347C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-68C>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 41526
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9684
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val449Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

15-90276254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276254
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276254
    reference: chr 15
allele count: 4
allele frequency: 3.298044259753966e-5
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.499G>A
  hgvsp: ENSP00000403871.2:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1348G>A
  hgvsp: ENSP00000268130.7:p.Ala450Thr
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-67G>A
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9688
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala450Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

15-90276260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276260
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276260
    reference: chr 15
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-61C>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1354C>T
  hgvsp: ENSP00000268130.7:p.Leu452Phe
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.505C>T
  hgvsp: ENSP00000403871.2:p.Leu169Phe
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9692
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu452Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

15-90276266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276266
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276266
    reference: chr 15
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1360C>T
  hgvsp: ENSP00000268130.7:p.Gln454Ter
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.511C>T
  hgvsp: ENSP00000403871.2:p.Gln171Ter
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-55C>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2334
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 650
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln454Ter
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

15-90276269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276269
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276269
    reference: chr 15
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1363G>A
  hgvsp: ENSP00000268130.7:p.Gly455Arg
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-52G>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.514G>A
  hgvsp: ENSP00000403871.2:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41651
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genotype quality: GenotypeQuality
  all individuals: 467
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genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly455Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

15-90276270-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276270
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276270
    reference: chr 15
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.515G>T
  hgvsp: ENSP00000403871.2:p.Gly172Val
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-51G>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1364G>T
  hgvsp: ENSP00000268130.7:p.Gly455Val
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly455Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

15-90276277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276277
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276277
    reference: chr 15
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.522C>T
  hgvsp: ENST00000444934.2:c.522C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-44C>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1371C>T
  hgvsp: ENST00000268130.7:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41668
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe457Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

15-90276281-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276281
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276281
    reference: chr 15
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1375C>G
  hgvsp: ENSP00000268130.7:p.Gln459Glu
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.526C>G
  hgvsp: ENSP00000403871.2:p.Gln176Glu
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-40C>G
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41667
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln459Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-90276296-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276296
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276296
    reference: chr 15
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1390C>A
  hgvsp: ENSP00000268130.7:p.Leu464Ile
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.541C>A
  hgvsp: ENSP00000403871.2:p.Leu181Ile
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-25C>A
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9687
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 41672
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu464Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

15-90276300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276300
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276300
    reference: chr 15
allele count: 16
allele frequency: 1.31791374254555e-4
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.545A>G
  hgvsp: ENSP00000403871.2:p.Lys182Arg
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-21A>G
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1394A>G
  hgvsp: ENSP00000268130.7:p.Lys465Arg
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 41673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys465Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/15-90276303-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276303
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276303
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-18A>C
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1397A>C
  hgvsp: ENSP00000268130.7:p.Tyr466Ser
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.548A>C
  hgvsp: ENSP00000403871.2:p.Tyr183Ser
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 5203
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genotype depth: GenotypeDepth
  all individuals: 7520
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 53
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genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 9685
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2377
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr466Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

15-90276305-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276305
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276305
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-16T>A
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1399T>A
  hgvsp: ENSP00000268130.7:p.Phe467Ile
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.550T>A
  hgvsp: ENSP00000403871.2:p.Phe184Ile
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe467Ile
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

15-90276309-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276309
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276309
    reference: chr 15
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.554C>G
  hgvsp: ENSP00000403871.2:p.Ser185Trp
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-12C>G
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1403C>G
  hgvsp: ENSP00000268130.7:p.Ser468Trp
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
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genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2381
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genotype quality: GenotypeQuality
  all individuals: 467
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser468Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

15-90276309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276309
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276309
    reference: chr 15
allele count: 8
allele frequency: 6.589460158476517e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-12C>T
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.554C>T
  hgvsp: ENSP00000403871.2:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1403C>T
  hgvsp: ENSP00000268130.7:p.Ser468Leu
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser468Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

15-90276310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276310
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276310
    reference: chr 15
allele count: 23
allele frequency: 1.894469795561999e-4
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1404G>A
  hgvsp: ENST00000268130.7:c.1404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.555G>A
  hgvsp: ENST00000444934.2:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-11G>A
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 9.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41694
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser468Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

15-90276310-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276310
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276310
    reference: chr 15
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.555G>T
  hgvsp: ENST00000444934.2:c.555G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1404G>T
  hgvsp: ENST00000268130.7:c.1404G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331-11G>T
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25872
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser468Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

15-90276321-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90276321
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90276321
    reference: chr 15
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000453971
  ensembl transcript: ENST00000560294
  gene symbol: WDR93
  hgvsc: ENST00000560294.1:c.1331G>C
  hgvsp: ENSP00000453971.1:p.Gly444Ala
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000403871
  ensembl transcript: ENST00000444934
  gene symbol: WDR93
  hgvsc: ENST00000444934.2:c.566G>C
  hgvsp: ENSP00000403871.2:p.Gly189Ala
  variant of: http://identifiers.org/hgnc/26924
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140527
  ensembl protein: ENSP00000268130
  ensembl transcript: ENST00000268130
  gene symbol: WDR93
  hgvsc: ENST00000268130.7:c.1415G>C
  hgvsp: ENSP00000268130.7:p.Gly472Ala
  variant of: http://identifiers.org/hgnc/26924
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly472Ala
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 232
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

FS
type: SiteQuality
SIO_000300: 3.136e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 4.3654e5

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.94e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 5.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.462e0

GenotypeQuality
all individuals: 278
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 4.36038e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.604e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.96e-2

QD
type: SiteQuality
SIO_000300: 5.84e0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 539
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.945525291828794e-4
allele num: 5140
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.996e1

VQSLOD
type: SiteQuality
SIO_000300: -5.877e-1

DP
type: SiteQuality
SIO_000300: 7.211e4

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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South Asian
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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African
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European (Finnish)
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Latino
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DP
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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South Asian
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African
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Other
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QD
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MQRankSum
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MQ
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DP
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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MQ
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FS
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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QD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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South Asian
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European (Finnish)
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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MQRankSum
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QD
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ClippingRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
all individuals: 3586
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.9147332936744e-5
allele num: 10086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

MQ
type: SiteQuality
SIO_000300: 5.838e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 2.697794e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e0

FS
type: SiteQuality
SIO_000300: 5.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.566e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.391e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

DP
type: SiteQuality
SIO_000300: 2.707544e6

BaseQRankSum
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SIO_000300: -4.341e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.292e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.675e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10502
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

DP
type: SiteQuality
SIO_000300: 2.708823e6

FS
type: SiteQuality
SIO_000300: 1.176e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.67e-1

QD
type: SiteQuality
SIO_000300: 1.655e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.914e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55448468832582e-5
allele num: 64330
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.252e0

FS
type: SiteQuality
SIO_000300: 5.659e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.242e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-2

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.709686e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 355
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variant carriers: 0

GenotypeQuality
all individuals: 36823
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.68055230517201e-4
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10782
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.712974e6

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 1.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.050420168067227e-3
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.205e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 4.362e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.957e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.719284e6

GenotypeQuality
all individuals: 2338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539266693347289e-5
allele num: 64966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

DP
type: SiteQuality
SIO_000300: 2.725725e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.733307377846993e-5
allele num: 10274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.173e0

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.1361e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e-1

DP
type: SiteQuality
SIO_000300: 2.735478e6

MQ
type: SiteQuality
SIO_000300: 6.03e1

QD
type: SiteQuality
SIO_000300: 2.941e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 396
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12822
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.837711617046118e-4
allele num: 10278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.295e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36822
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 1.752e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

DP
type: SiteQuality
SIO_000300: 2.742876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36822
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variant carriers: 1

GenotypeQuality
all individuals: 1491
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13224
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.742876e6

FS
type: SiteQuality
SIO_000300: 1.752e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13316
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.414e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.74416e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 9.94e0

MQRankSum
type: SiteQuality
SIO_000300: -2.109e0

VQSLOD
type: SiteQuality
SIO_000300: -3.246e0

FS
type: SiteQuality
SIO_000300: 6.057e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.543e0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523693432881304e-5
allele num: 65630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.724e0

QD
type: SiteQuality
SIO_000300: 7.3e0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.244e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 1.102e0

DP
type: SiteQuality
SIO_000300: 2.747137e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.047386865762609e-5
allele num: 65630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.102e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.244e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 7.3e0

MQRankSum
type: SiteQuality
SIO_000300: -5.724e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 2.747137e6

GenotypeQuality
all individuals: 2194
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517036317849449e-5
allele num: 65918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.084491384102279e-4
allele num: 14392
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.334e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

DP
type: SiteQuality
SIO_000300: 2.759248e6

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 132
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517036317849449e-5
allele num: 65918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.759248e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.334e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8642
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.955e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2889
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GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510528382828313e-5
allele num: 66202
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.770016e6

MQ
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BaseQRankSum
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MQRankSum
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SIO_000300: -5.605e0

ReadPosRankSum
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SIO_000300: -9.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.538e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

VQSLOD
type: SiteQuality
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QD
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SIO_000300: 1.913e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508932882665379e-5
allele num: 66272
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.61e-1

MQ
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SIO_000300: 6.0e1

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.02e-2

QD
type: SiteQuality
SIO_000300: 1.289e1

ReadPosRankSum
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SIO_000300: 6.4e-1

BaseQRankSum
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FS
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DP
type: SiteQuality
SIO_000300: 2.777201e6

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66456
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Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.297229219143577e-5
allele num: 15880
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.354e0

VQSLOD
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DP
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SIO_000300: 2.781193e6

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 6.3e-3

QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.111722283339445e-5
allele num: 16362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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DP
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Latino
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Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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FS
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ClippingRankSum
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QD
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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allele num: 66648
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South Asian
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MQ
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FS
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QD
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8650
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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QD
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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BaseQRankSum
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FS
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MQ
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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VQSLOD
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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East Asian
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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MQRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66720
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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African
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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DP
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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South Asian
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Latino
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African
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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South Asian
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FS
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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European (Finnish)
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African
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Latino
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European (Finnish)
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QD
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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East Asian
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African
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Latino
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allele frequency: 3.800310934531007e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.796447e6

FS
type: SiteQuality
SIO_000300: 1.102e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.626e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 4.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.82e-1

QD
type: SiteQuality
SIO_000300: 1.546e1

VQSLOD
type: SiteQuality
SIO_000300: -2.909e-1

DP
type: SiteQuality
SIO_000300: 2.795118e6

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2573
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GenotypeQuality
all individuals: 2225
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.122e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.599e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -8.924e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.795162e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
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East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.167256e6

VQSLOD
type: SiteQuality
SIO_000300: -5.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 5.926e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.564e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.522e0

QD
type: SiteQuality
SIO_000300: 1.33e1

GenotypeQuality
all individuals: 8997
bin: 6.75e1
variant carriers: 26

South Asian
type: Population
allele count: 8
allele frequency: 4.881025015253203e-4
allele num: 16390
num of homozygotes: 0

Other
type: Population
allele count: 32
allele frequency: 3.644646924829157e-2
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 3.136434918975431e-3
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 384
allele frequency: 6.330365974282888e-2
allele num: 6066
num of homozygotes: 0

African
type: Population
allele count: 210
allele frequency: 2.214722632356043e-2
allele num: 9482
num of homozygotes: 0

East Asian
type: Population
allele count: 55
allele frequency: 6.48126325712939e-3
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 843
allele frequency: 1.31500951548997e-2
allele num: 64106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.51401e2

VQSLOD
type: SiteQuality
SIO_000300: -1.159e2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e0

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

QD
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 2.118069e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.454e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.26e-2

MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.366e0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.221e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

DP
type: SiteQuality
SIO_000300: 1.828153e6

FS
type: SiteQuality
SIO_000300: 7.008e0

QD
type: SiteQuality
SIO_000300: 1.155e1

MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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FS
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.506931886678722e-5
allele num: 66360
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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Other
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allele frequency: 0.0e0
allele num: 908
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele num: 8654
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African
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66616
num of homozygotes: 0

Latino
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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East Asian
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European (Non-Finnish)
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allele num: 66644
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South Asian
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Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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GenotypeQuality
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 6.000600060006001e-5
allele num: 66660
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South Asian
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East Asian
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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Other
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African
type: Population
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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East Asian
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African
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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African
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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FS
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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QD
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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Other
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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African
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Other
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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East Asian
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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African
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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MQRankSum
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MQ
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Other
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Latino
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allele frequency: 8.637070305752289e-5
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South Asian
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MQ
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Non-Finnish)
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African
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Latino
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allele frequency: 1.295560545862843e-3
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European (Finnish)
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South Asian
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Other
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VQSLOD
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BaseQRankSum
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QD
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FS
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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South Asian
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Other
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FS
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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African
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Other
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VQSLOD
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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MQRankSum
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MQ
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GenotypeQuality
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African
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Latino
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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FS
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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MQ
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

QD
type: SiteQuality
SIO_000300: 1.356e1