16-20651840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20651840
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 20651840
    reference: chr 16
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005187
  ensembl protein: ENSP00000457003
  ensembl transcript: ENST00000568235
  gene symbol: ACSM3
  hgvsc: ENST00000568235.1:c.-190+30208C>T
  variant of: http://identifiers.org/hgnc/10522
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166743
  ensembl transcript: ENST00000519031
  gene symbol: ACSM1
  hgvsc: ENST00000519031.1:n.485G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000301956
  ensembl transcript: ENST00000307493
  gene symbol: ACSM1
  hgvsc: ENST00000307493.4:c.1059G>A
  hgvsp: ENST00000307493.4:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000219151
  ensembl transcript: ENST00000219151
  gene symbol: ACSM1
  hgvsc: ENST00000219151.4:c.-85G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428098
  ensembl transcript: ENST00000524149
  gene symbol: ACSM1
  hgvsc: ENST00000524149.1:c.176G>A
  hgvsp: ENST00000524149.1:c.176G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428047
  ensembl transcript: ENST00000520010
  gene symbol: ACSM1
  hgvsc: ENST00000520010.1:c.1059G>A
  hgvsp: ENST00000520010.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428650
  ensembl transcript: ENST00000519745
  gene symbol: ACSM1
  hgvsc: ENST00000519745.1:c.*439-3067G>A
  variant of: http://identifiers.org/hgnc/18049
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu353Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

15-66641648-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641648
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641648
    reference: chr 15
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*110+5G>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.411+5G>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.416G>C
  hgvsp: ENSP00000457172.1:p.Ser139Thr
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.108+5G>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.411+5G>C
  variant of: http://identifiers.org/hgnc/30750
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser139Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

15-66641653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641653
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641653
    reference: chr 15
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.411G>A
  hgvsp: ENST00000568216.1:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.411G>A
  hgvsp: ENST00000562124.1:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.108G>A
  hgvsp: ENST00000367709.4:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.411G>A
  hgvsp: ENST00000261881.4:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*110G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2192
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.411G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

15-66641669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641669
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641669
    reference: chr 15
allele count: 2
allele frequency: 1.648750247312537e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*94G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.395G>A
  hgvsp: ENSP00000457172.1:p.Ser132Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.395G>A
  hgvsp: ENSP00000261881.4:p.Ser132Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.395G>A
  hgvsp: ENSP00000457406.1:p.Ser132Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.92G>A
  hgvsp: ENSP00000356682.4:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7053
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43763
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser132Asn
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

15-66641673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641673
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641673
    reference: chr 15
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.391G>A
  hgvsp: ENSP00000457172.1:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.88G>A
  hgvsp: ENSP00000356682.4:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.391G>A
  hgvsp: ENSP00000261881.4:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.391G>A
  hgvsp: ENSP00000457406.1:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*90G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7071
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly131Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

15-66641674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641674
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641674
    reference: chr 15
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.390G>A
  hgvsp: ENST00000562124.1:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.390G>A
  hgvsp: ENST00000568216.1:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.87G>A
  hgvsp: ENST00000367709.4:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*89G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.390G>A
  hgvsp: ENST00000261881.4:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu130Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

15-66641684-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641684
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641682
    reference: chr 15
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.378_379delAG
  hgvsp: ENSP00000261881.4:p.Arg126SerfsTer2
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.378_379delAG
  hgvsp: ENSP00000457172.1:p.Arg126SerfsTer2
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.378_379delAG
  hgvsp: ENSP00000457406.1:p.Arg126SerfsTer2
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*77_*78delAG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.75_76delAG
  hgvsp: ENSP00000356682.4:p.Arg25SerfsTer2
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg126SerfsTer2
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: ACT
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

16-20651841-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20651841
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 20651841
    reference: chr 16
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428650
  ensembl transcript: ENST00000519745
  gene symbol: ACSM1
  hgvsc: ENST00000519745.1:c.*439-3068A>G
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000219151
  ensembl transcript: ENST00000219151
  gene symbol: ACSM1
  hgvsc: ENST00000219151.4:c.-86A>G
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005187
  ensembl protein: ENSP00000457003
  ensembl transcript: ENST00000568235
  gene symbol: ACSM3
  hgvsc: ENST00000568235.1:c.-190+30209T>C
  variant of: http://identifiers.org/hgnc/10522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000301956
  ensembl transcript: ENST00000307493
  gene symbol: ACSM1
  hgvsc: ENST00000307493.4:c.1058A>G
  hgvsp: ENSP00000301956.3:p.Glu353Gly
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166743
  ensembl transcript: ENST00000519031
  gene symbol: ACSM1
  hgvsc: ENST00000519031.1:n.484A>G
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428098
  ensembl transcript: ENST00000524149
  gene symbol: ACSM1
  hgvsc: ENST00000524149.1:c.175A>G
  hgvsp: ENSP00000428098.1:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428047
  ensembl transcript: ENST00000520010
  gene symbol: ACSM1
  hgvsc: ENST00000520010.1:c.1058A>G
  hgvsp: ENSP00000428047.1:p.Glu353Gly
  variant of: http://identifiers.org/hgnc/18049
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 15071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9083
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24700
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu353Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

16-20651842-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20651842
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 20651842
    reference: chr 16
allele count: 14
allele frequency: 1.153516577681102e-4
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166743
  ensembl transcript: ENST00000519031
  gene symbol: ACSM1
  hgvsc: ENST00000519031.1:n.483G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428047
  ensembl transcript: ENST00000520010
  gene symbol: ACSM1
  hgvsc: ENST00000520010.1:c.1057G>A
  hgvsp: ENSP00000428047.1:p.Glu353Lys
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005187
  ensembl protein: ENSP00000457003
  ensembl transcript: ENST00000568235
  gene symbol: ACSM3
  hgvsc: ENST00000568235.1:c.-190+30210C>T
  variant of: http://identifiers.org/hgnc/10522
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000219151
  ensembl transcript: ENST00000219151
  gene symbol: ACSM1
  hgvsc: ENST00000219151.4:c.-87G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000301956
  ensembl transcript: ENST00000307493
  gene symbol: ACSM1
  hgvsc: ENST00000307493.4:c.1057G>A
  hgvsp: ENSP00000301956.3:p.Glu353Lys
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428650
  ensembl transcript: ENST00000519745
  gene symbol: ACSM1
  hgvsc: ENST00000519745.1:c.*439-3069G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428098
  ensembl transcript: ENST00000524149
  gene symbol: ACSM1
  hgvsc: ENST00000524149.1:c.174G>A
  hgvsp: ENSP00000428098.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/18049
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4177
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu353Lys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

16-20651845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20651845
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 20651845
    reference: chr 16
allele count: 4
allele frequency: 3.29614186594591e-5
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000301956
  ensembl transcript: ENST00000307493
  gene symbol: ACSM1
  hgvsc: ENST00000307493.4:c.1054C>T
  hgvsp: ENSP00000301956.3:p.Gln352Ter
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000219151
  ensembl transcript: ENST00000219151
  gene symbol: ACSM1
  hgvsc: ENST00000219151.4:c.-90C>T
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005187
  ensembl protein: ENSP00000457003
  ensembl transcript: ENST00000568235
  gene symbol: ACSM3
  hgvsc: ENST00000568235.1:c.-190+30213G>A
  variant of: http://identifiers.org/hgnc/10522
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428098
  ensembl transcript: ENST00000524149
  gene symbol: ACSM1
  hgvsc: ENST00000524149.1:c.171C>T
  hgvsp: ENSP00000428098.1:p.Gln58Ter
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428650
  ensembl transcript: ENST00000519745
  gene symbol: ACSM1
  hgvsc: ENST00000519745.1:c.*439-3072C>T
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428047
  ensembl transcript: ENST00000520010
  gene symbol: ACSM1
  hgvsc: ENST00000520010.1:c.1054C>T
  hgvsp: ENSP00000428047.1:p.Gln352Ter
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166743
  ensembl transcript: ENST00000519031
  gene symbol: ACSM1
  hgvsc: ENST00000519031.1:n.480C>T
  variant of: http://identifiers.org/hgnc/18049
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5340
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln352Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

16-20651848-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20651848
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 20651848
    reference: chr 16
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166743
  ensembl transcript: ENST00000519031
  gene symbol: ACSM1
  hgvsc: ENST00000519031.1:n.477G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428047
  ensembl transcript: ENST00000520010
  gene symbol: ACSM1
  hgvsc: ENST00000520010.1:c.1051G>A
  hgvsp: ENSP00000428047.1:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000301956
  ensembl transcript: ENST00000307493
  gene symbol: ACSM1
  hgvsc: ENST00000307493.4:c.1051G>A
  hgvsp: ENSP00000301956.3:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428098
  ensembl transcript: ENST00000524149
  gene symbol: ACSM1
  hgvsc: ENST00000524149.1:c.168G>A
  hgvsp: ENSP00000428098.1:p.Asp57Asn
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005187
  ensembl protein: ENSP00000457003
  ensembl transcript: ENST00000568235
  gene symbol: ACSM3
  hgvsc: ENST00000568235.1:c.-190+30216C>T
  variant of: http://identifiers.org/hgnc/10522
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000219151
  ensembl transcript: ENST00000219151
  gene symbol: ACSM1
  hgvsc: ENST00000219151.4:c.-93G>A
  variant of: http://identifiers.org/hgnc/18049
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166743
  ensembl protein: ENSP00000428650
  ensembl transcript: ENST00000519745
  gene symbol: ACSM1
  hgvsc: ENST00000519745.1:c.*439-3075G>A
  variant of: http://identifiers.org/hgnc/18049
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp351Asn
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

15-66641703-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641703
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641703
    reference: chr 15
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.58G>C
  hgvsp: ENSP00000356682.4:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.361G>C
  hgvsp: ENSP00000261881.4:p.Glu121Gln
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*60G>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.361G>C
  hgvsp: ENSP00000457172.1:p.Glu121Gln
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.361G>C
  hgvsp: ENSP00000457406.1:p.Glu121Gln
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu121Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP

15-66641722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641722
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641722
    reference: chr 15
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*41A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.342A>G
  hgvsp: ENST00000568216.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.39A>G
  hgvsp: ENST00000367709.4:c.39A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.342A>G
  hgvsp: ENST00000261881.4:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.342A>G
  hgvsp: ENST00000570251.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.342A>G
  hgvsp: ENST00000562124.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43762
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu114Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

15-66641729-TGTGCCCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641729
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641722
    reference: chr 15
allele count: 11
allele frequency: 9.062896501721951e-5
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.328_334delTGGGCAC
  hgvsp: ENSP00000458117.1:p.Trp110IlefsTer?
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.328_334delTGGGCAC
  hgvsp: ENSP00000457406.1:p.Trp110IlefsTer29
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.328_334delTGGGCAC
  hgvsp: ENSP00000261881.4:p.Trp110IlefsTer29
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.328_334delTGGGCAC
  hgvsp: ENSP00000457172.1:p.Trp110IlefsTer27
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.25_31delTGGGCAC
  hgvsp: ENSP00000356682.4:p.Trp9IlefsTer29
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*27_*33delTGGGCAC
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Trp110IlefsTer29
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: TGTGCCCA
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-66641731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641731
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641731
    reference: chr 15
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.333A>G
  hgvsp: ENST00000570251.1:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.333A>G
  hgvsp: ENST00000261881.4:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.333A>G
  hgvsp: ENST00000568216.1:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.30A>G
  hgvsp: ENST00000367709.4:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.333A>G
  hgvsp: ENST00000562124.1:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*32A>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43761
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala111Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

15-66641732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
allele count: 3
allele frequency: 2.472310126582278e-5
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.332C>T
  hgvsp: ENSP00000457172.1:p.Ala111Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.29C>T
  hgvsp: ENSP00000356682.4:p.Ala10Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.332C>T
  hgvsp: ENSP00000261881.4:p.Ala111Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.332C>T
  hgvsp: ENSP00000458117.1:p.Ala111Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.332C>T
  hgvsp: ENSP00000457406.1:p.Ala111Val
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10896
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45103
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala111Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

15-66641732-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
allele count: 13570
allele frequency: 1.118308280590717e-1
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.29C>G
  hgvsp: ENSP00000356682.4:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.332C>G
  hgvsp: ENSP00000457172.1:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.332C>G
  hgvsp: ENSP00000457406.1:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.332C>G
  hgvsp: ENSP00000261881.4:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*31C>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.332C>G
  hgvsp: ENSP00000458117.1:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 5.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 398
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.75e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 6.75e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 5.25e1
  variant carriers: 197
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 7.25e1
  variant carriers: 312
genotype depth: GenotypeDepth
  all individuals: 10896
  bin: 9.75e1
  variant carriers: 9085
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.25e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.75e1
  variant carriers: 315
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 6.25e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 4.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala111Gly
num of homozygotes: 1094
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

15-66641732-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641732
    reference: chr 15
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.332C>A
  hgvsp: ENSP00000457172.1:p.Ala111Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.332C>A
  hgvsp: ENSP00000457406.1:p.Ala111Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.29C>A
  hgvsp: ENSP00000356682.4:p.Ala10Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*31C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.332C>A
  hgvsp: ENSP00000458117.1:p.Ala111Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.332C>A
  hgvsp: ENSP00000261881.4:p.Ala111Glu
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10896
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala111Glu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

15-66641737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641737
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641737
    reference: chr 15
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.327C>T
  hgvsp: ENST00000562124.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.24C>T
  hgvsp: ENST00000367709.4:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.327C>T
  hgvsp: ENST00000568216.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.327C>T
  hgvsp: ENST00000261881.4:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.327C>T
  hgvsp: ENST00000570251.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His109His
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

15-66641738-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641738
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641738
    reference: chr 15
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*25A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.326A>G
  hgvsp: ENSP00000261881.4:p.His109Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.326A>G
  hgvsp: ENSP00000457406.1:p.His109Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.23A>G
  hgvsp: ENSP00000356682.4:p.His8Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.326A>G
  hgvsp: ENSP00000457172.1:p.His109Arg
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.326A>G
  hgvsp: ENSP00000458117.1:p.His109Arg
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His109Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

15-66641740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641740
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641740
    reference: chr 15
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.324G>A
  hgvsp: ENST00000570251.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.324G>A
  hgvsp: ENST00000562124.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.324G>A
  hgvsp: ENST00000568216.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*23G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.324G>A
  hgvsp: ENST00000261881.4:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.21G>A
  hgvsp: ENST00000367709.4:c.21G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu108Glu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

15-66641745-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641745
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641745
    reference: chr 15
allele count: 4
allele frequency: 3.296739524610161e-5
allele num: 121332
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.319A>G
  hgvsp: ENSP00000261881.4:p.Met107Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.319A>G
  hgvsp: ENSP00000458117.1:p.Met107Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.319A>G
  hgvsp: ENSP00000457406.1:p.Met107Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.319A>G
  hgvsp: ENSP00000457172.1:p.Met107Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.16A>G
  hgvsp: ENSP00000356682.4:p.Met6Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*18A>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met107Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

15-66641748-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641748
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641748
    reference: chr 15
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.316C>A
  hgvsp: ENSP00000457406.1:p.His106Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.316C>A
  hgvsp: ENSP00000457172.1:p.His106Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.316C>A
  hgvsp: ENSP00000261881.4:p.His106Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*15C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.13C>A
  hgvsp: ENSP00000356682.4:p.His5Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.316C>A
  hgvsp: ENSP00000458117.1:p.His106Asn
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7794
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His106Asn
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

15-66641749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641749
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641749
    reference: chr 15
allele count: 2
allele frequency: 1.648614339647526e-5
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.12A>G
  hgvsp: ENST00000367709.4:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.315A>G
  hgvsp: ENST00000261881.4:c.315A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.315A>G
  hgvsp: ENST00000568216.1:c.315A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.315A>G
  hgvsp: ENST00000562124.1:c.315A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.315A>G
  hgvsp: ENST00000570251.1:c.315A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg105Arg
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

15-66641754-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641754
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641754
    reference: chr 15
allele count: 31
allele frequency: 2.556195062420634e-4
allele num: 121274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*9A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.310A>G
  hgvsp: ENSP00000457406.1:p.Ile104Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.310A>G
  hgvsp: ENSP00000457172.1:p.Ile104Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.7A>G
  hgvsp: ENSP00000356682.4:p.Ile3Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.310A>G
  hgvsp: ENSP00000458117.1:p.Ile104Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.310A>G
  hgvsp: ENSP00000261881.4:p.Ile104Val
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile104Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-66641755-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641755
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641755
    reference: chr 15
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.309A>T
  hgvsp: ENST00000261881.4:c.309A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.309A>T
  hgvsp: ENST00000562124.1:c.309A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*8A>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.309A>T
  hgvsp: ENST00000568216.1:c.309A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.309A>T
  hgvsp: ENST00000570251.1:c.309A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.6A>T
  hgvsp: ENST00000367709.4:c.6A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu103Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

15-66641760-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641760
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641760
    reference: chr 15
allele count: 2
allele frequency: 1.650709805216243e-5
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.*3A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.304A>G
  hgvsp: ENSP00000457172.1:p.Met102Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.304A>G
  hgvsp: ENSP00000261881.4:p.Met102Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.304A>G
  hgvsp: ENSP00000458117.1:p.Met102Val
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.1A>G
  hgvsp: ENSP00000356682.4:p.Met1?
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.304A>G
  hgvsp: ENSP00000457406.1:p.Met102Val
  variant of: http://identifiers.org/hgnc/30750
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7622
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

15-66641779-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641779
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641779
    reference: chr 15
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-4G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-4G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-4G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-4G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-4G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-4G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: c.289-4G>A
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/15-66641783-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641783
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641783
    reference: chr 15
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-8T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-8T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-8T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-8T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-8T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-8T>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2752
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 7.25e1
  variant carriers: 0
hgvs: c.289-8T>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

15-66641816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641816
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641816
    reference: chr 15
allele count: 1
allele frequency: 8.35421888053467e-6
allele num: 119700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-41G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-41G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-41G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-41G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-41G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-41G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

15-66641820-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641820
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641820
    reference: chr 15
allele count: 2
allele frequency: 1.674873547047198e-5
allele num: 119412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-45G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-45G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-45G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-45G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-45G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-45G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40747
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/15-66641827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641827
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641827
    reference: chr 15
allele count: 1
allele frequency: 8.393345755485052e-6
allele num: 119142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-52G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-52G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-52G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-52G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-52G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-52G>T
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

15-66641827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66641827
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66641827
    reference: chr 15
allele count: 3
allele frequency: 2.518003726645515e-5
allele num: 119142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.289-52G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.289-52G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.213-52G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.289-52G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.289-52G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-15-52G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40747
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

15-66643822-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643822
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643822
    reference: chr 15
allele count: 1
allele frequency: 8.555637309423178e-6
allele num: 116882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+41T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+645T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+41T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+41T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+645T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+41T>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17680
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 5899
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28327
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

15-66643826-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643826
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643825
    reference: chr 15
allele count: 1
allele frequency: 8.540438978563499e-6
allele num: 117090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+640delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+640delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+36delT
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2993
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: TA
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

15-66643837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643837
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643837
    reference: chr 15
allele count: 1
allele frequency: 8.442095665828085e-6
allele num: 118454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+26C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+630C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+26C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+630C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+26C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+26C>T
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

15-66643838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643838
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643838
    reference: chr 15
allele count: 1
allele frequency: 8.430565859580495e-6
allele num: 118616
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+25C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+629C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+25C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+25C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+629C>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+25C>T
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6306
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-66643840-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643840
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643840
    reference: chr 15
allele count: 14
allele frequency: 1.177321425568058e-4
allele num: 118914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+627G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+23G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+23G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+627G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+23G>T
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+23G>T
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11304
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6159
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6339
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

15-66643840-CTAACA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643840
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643835
    reference: chr 15
allele count: 4
allele frequency: 3.363775501623022e-5
allele num: 118914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+18_288+22delTGTTA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+622_-16+626delTGTTA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+18_288+22delTGTTA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+18_288+22delTGTTA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+622_212+626delTGTTA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+18_288+22delTGTTA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6159
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6339
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: CTAACA
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/15-66643845-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643845
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643845
    reference: chr 15
allele count: 1
allele frequency: 8.3558942478024e-6
allele num: 119676
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288+18T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288+18T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288+18T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+622T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+622T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288+18T>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27317
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

15-66643863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643863
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643863
    reference: chr 15
allele count: 6
allele frequency: 4.963025460320612e-5
allele num: 120894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+604G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.288G>A
  hgvsp: ENST00000568216.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.288G>A
  hgvsp: ENST00000570251.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.288G>A
  hgvsp: ENST00000261881.4:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+604G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.288G>A
  hgvsp: ENST00000562124.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28195
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
hgvs: c.288G>A
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

15-66643871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643871
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643871
    reference: chr 15
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.280G>A
  hgvsp: ENSP00000457172.1:p.Gly94Ser
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.280G>A
  hgvsp: ENSP00000458117.1:p.Gly94Ser
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+596G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+596G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.280G>A
  hgvsp: ENSP00000457406.1:p.Gly94Ser
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.280G>A
  hgvsp: ENSP00000261881.4:p.Gly94Ser
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45271
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly94Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

15-66643874-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643874
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643874
    reference: chr 15
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+593A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+593A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.277A>G
  hgvsp: ENSP00000458117.1:p.Lys93Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.277A>G
  hgvsp: ENSP00000457172.1:p.Lys93Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.277A>G
  hgvsp: ENSP00000457406.1:p.Lys93Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.277A>G
  hgvsp: ENSP00000261881.4:p.Lys93Glu
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45335
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys93Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

15-66643886-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643886
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643886
    reference: chr 15
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.265A>G
  hgvsp: ENSP00000457406.1:p.Lys89Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.265A>G
  hgvsp: ENSP00000458117.1:p.Lys89Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+581A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.265A>G
  hgvsp: ENSP00000457172.1:p.Lys89Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.265A>G
  hgvsp: ENSP00000261881.4:p.Lys89Glu
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+581A>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys89Glu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

15-66643890-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643890
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643890
    reference: chr 15
allele count: 2
allele frequency: 1.649811096629436e-5
allele num: 121226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+577G>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.261G>C
  hgvsp: ENSP00000261881.4:p.Lys87Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.261G>C
  hgvsp: ENSP00000457406.1:p.Lys87Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.261G>C
  hgvsp: ENSP00000457172.1:p.Lys87Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.261G>C
  hgvsp: ENSP00000458117.1:p.Lys87Asn
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+577G>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys87Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

15-66643906-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643906
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643906
    reference: chr 15
allele count: 2
allele frequency: 1.649566164098842e-5
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.245G>A
  hgvsp: ENSP00000261881.4:p.Arg82Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.245G>A
  hgvsp: ENSP00000457172.1:p.Arg82Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.245G>A
  hgvsp: ENSP00000457406.1:p.Arg82Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.245G>A
  hgvsp: ENSP00000458117.1:p.Arg82Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+561G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+561G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg82Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-66643924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643924
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643924
    reference: chr 15
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+543G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.227G>A
  hgvsp: ENSP00000457172.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.227G>A
  hgvsp: ENSP00000457406.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+543G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.227G>A
  hgvsp: ENSP00000261881.4:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.227G>A
  hgvsp: ENSP00000458117.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg76Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

15-66643925-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643925
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643925
    reference: chr 15
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+542A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.226A>G
  hgvsp: ENSP00000261881.4:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.226A>G
  hgvsp: ENSP00000457172.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.226A>G
  hgvsp: ENSP00000457406.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+542A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.226A>G
  hgvsp: ENSP00000458117.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6472
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg76Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

15-66643929-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643929
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643929
    reference: chr 15
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.222A>C
  hgvsp: ENST00000261881.4:c.222A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.222A>C
  hgvsp: ENST00000562124.1:c.222A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.222A>C
  hgvsp: ENST00000570251.1:c.222A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.222A>C
  hgvsp: ENST00000568216.1:c.222A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+538A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+538A>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser74Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

15-66643948-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643948
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643948
    reference: chr 15
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+519T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-10T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-10T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-10T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+519T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-10T>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23714
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2738
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-66643951-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643951
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643951
    reference: chr 15
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-13C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+516C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-13C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+516C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-13C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-13C>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22186
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37153
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-66643954-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643954
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643954
    reference: chr 15
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-16A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-16A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-16A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-16A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+513A>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+513A>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10952
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

15-66643955-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643955
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643955
    reference: chr 15
allele count: 7
allele frequency: 5.841024014953022e-5
allele num: 119842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+512C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-17C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-17C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-17C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+512C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-17C>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19358
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8951
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

15-66643966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643966
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643966
    reference: chr 15
allele count: 5
allele frequency: 4.34487912546273e-5
allele num: 115078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+501G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-28G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-28G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+501G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-28G>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-28G>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13712
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5850
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

15-66643968-A-AATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643968
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643971
    reference: chr 15
allele count: 1
allele frequency: 8.910114762278139e-6
allele num: 112232
alternate allele: AATT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-31_213-30insAAT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+498_212+499insAAT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+498_-16+499insAAT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-31_213-30insAAT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-31_213-30insAAT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-31_213-30insAAT
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5489
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7872
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

15-66643968-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643968
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
allele count: 7
allele frequency: 6.237080333594697e-5
allele num: 112232
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-31_213-30insA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-31_213-30insA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-31_213-30insA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-31_213-30insA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+498_-16+499insA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+498_212+499insA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6136
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7872
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

15-66643969-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643970
    reference: chr 15
allele count: 1114
allele frequency: 1.199577886416988e-2
allele num: 92866
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-32dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-32dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+497dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-32dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-32dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+497dupA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 9.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.5e0
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 1.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 9.75e1
  variant carriers: 579
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 5.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 37
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

15-66643969-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643971
    reference: chr 15
allele count: 271
allele frequency: 2.918183188680464e-3
allele num: 92866
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-33_213-32dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-33_213-32dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+496_-16+497dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-33_213-32dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-33_213-32dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+496_212+497dupAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3806
  bin: 6.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 2.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 11
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

15-66643969-G-GTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643972
    reference: chr 15
allele count: 38
allele frequency: 4.09191738634161e-4
allele num: 92866
alternate allele: GTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+495_-16+497dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-34_213-32dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-34_213-32dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-34_213-32dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+495_212+497dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-34_213-32dupAAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

15-66643969-G-GTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
allele count: 4
allele frequency: 4.307281459306958e-5
allele num: 92866
alternate allele: GTTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-35_213-32dupAAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-35_213-32dupAAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-35_213-32dupAAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+494_-16+497dupAAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-35_213-32dupAAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+494_212+497dupAAAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7056
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

15-66643969-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
allele count: 24
allele frequency: 2.584368875584175e-4
allele num: 92866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-31C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-31C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+498C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-31C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-31C>A
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+498C>A
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 1.75e1
  variant carriers: 3
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

15-66643969-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643969
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643968
    reference: chr 15
allele count: 1
allele frequency: 1.07682036482674e-5
allele num: 92866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-32delA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-32delA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-32delA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+497delA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-32delA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+497delA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: GT
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-66643972-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643972
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
allele count: 5
allele frequency: 4.825695865343783e-5
allele num: 103612
alternate allele: TTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-35_213-34insGA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-35_213-34insGA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-35_213-34insGA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-35_213-34insGA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+494_-16+495insGA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+494_212+495insGA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10552
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8966
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7886
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5607
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

15-66643973-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
allele count: 2
allele frequency: 1.932815338822529e-5
allele num: 103476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-35A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-35A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+494A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-35A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-35A>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+494A>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5598
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7853
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

15-66643973-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
allele count: 7
allele frequency: 6.764853685878852e-5
allele num: 103476
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-36_213-35insG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+493_212+494insG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-36_213-35insG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+493_-16+494insG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-36_213-35insG
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-36_213-35insG
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11633
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7853
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

15-66643973-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643972
    reference: chr 15
allele count: 5
allele frequency: 4.832038347056322e-5
allele num: 103476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+493delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-36delT
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+493delT
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11633
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7853
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: TA
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

15-66643974-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643975
    reference: chr 15
allele count: 780
allele frequency: 2.122448979591837e-2
allele num: 36750
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-37dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+492dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-37dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-37dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-37dupA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+492dupA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 308
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 32878
  bin: 2.5e0
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 6.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 20
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

15-66643974-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643976
    reference: chr 15
allele count: 161
allele frequency: 4.380952380952381e-3
allele num: 36750
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-38_213-37dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-38_213-37dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+491_-16+492dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-38_213-37dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+491_212+492dupAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-38_213-37dupAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 32878
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 11
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

15-66643974-A-ATTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643977
    reference: chr 15
allele count: 19
allele frequency: 5.170068027210885e-4
allele num: 36750
alternate allele: ATTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-39_213-37dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-39_213-37dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+490_-16+492dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-39_213-37dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+490_212+492dupAAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-39_213-37dupAAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/15-66643974-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
allele count: 2419
allele frequency: 6.582312925170068e-2
allele num: 36750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-36T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-36T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+493T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-36T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-36T>G
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+493T>G
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 407
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 433
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 32878
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 2.75e1
  variant carriers: 15
num of homozygotes: 244
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

15-66643974-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
allele count: 4896
allele frequency: 1.332244897959184e-1
allele num: 36750
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 1012
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 524
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 995
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 1120
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 472
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 366
genotype quality: GenotypeQuality
  all individuals: 32878
  bin: 2.5e0
  variant carriers: 313
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 292
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 362
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 6.75e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.25e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 2.75e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 344
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 260
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 358
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 272
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 4.75e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.25e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.25e1
  variant carriers: 183
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 213
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 9.75e1
  variant carriers: 1673
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 179
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 456
  allele frequency: 2.205029013539652e-1
  allele num: 2068
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 640
  allele frequency: 2.274342572850035e-1
  allele num: 2814
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2365
  allele frequency: 1.169055857637172e-1
  allele num: 20230
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 762
  allele frequency: 2.05945945945946e-1
  allele num: 3700
  num of homozygotes: 0
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

15-66643974-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643974
    reference: chr 15
allele count: 1
allele frequency: 2.72108843537415e-5
allele num: 36750
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-36T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-36T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-36T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-36T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+493T>C
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+493T>C
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32878
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-66643976-TTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66643976
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66643973
    reference: chr 15
allele count: 1
allele frequency: 1.354426265034132e-5
allele num: 73832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457172
  ensembl transcript: ENST00000568216
  gene symbol: TIPIN
  hgvsc: ENST00000568216.1:c.213-41_213-39delGAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000356682
  ensembl transcript: ENST00000367709
  gene symbol: TIPIN
  hgvsc: ENST00000367709.4:c.-16+488_-16+490delGAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000261881
  ensembl transcript: ENST00000261881
  gene symbol: TIPIN
  hgvsc: ENST00000261881.4:c.213-41_213-39delGAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000458117
  ensembl transcript: ENST00000570251
  gene symbol: TIPIN
  hgvsc: ENST00000570251.1:c.213-41_213-39delGAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000457406
  ensembl transcript: ENST00000562124
  gene symbol: TIPIN
  hgvsc: ENST00000562124.1:c.213-41_213-39delGAA
  variant of: http://identifiers.org/hgnc/30750
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000075131
  ensembl protein: ENSP00000455656
  ensembl transcript: ENST00000566524
  gene symbol: TIPIN
  hgvsc: ENST00000566524.1:c.212+488_212+490delGAA
  variant of: http://identifiers.org/hgnc/30750
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10884
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7708
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 0
reference allele: TTTC

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8515
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24711
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5343
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4168
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.91055e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 5.226e0

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.97e0

DP
type: SiteQuality
SIO_000300: 3.427596e6

FS
type: SiteQuality
SIO_000300: 6.78e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.648e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.233e0

GenotypeQuality
all individuals: 1901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43760
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.149e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.61e0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.44e-1

DP
type: SiteQuality
SIO_000300: 3.429678e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.292e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1850
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.28e1

FS
type: SiteQuality
SIO_000300: 1.749e0

DP
type: SiteQuality
SIO_000300: 3.432736e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43764
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

DP
type: SiteQuality
SIO_000300: 3.43305e6

GenotypeQuality
all individuals: 7063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

DP
type: SiteQuality
SIO_000300: 3.433162e6

QD
type: SiteQuality
SIO_000300: 1.048e1

FS
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 1943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 5.685e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 3.433477e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: -8.34e-1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5344
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4177
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8513
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 3.1914e1

MQ
type: SiteQuality
SIO_000300: 5.805e1

DP
type: SiteQuality
SIO_000300: 1.910518e6

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5342
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8526
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.209607741489545e-3
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 3.344e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.779e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 1.911164e6

QD
type: SiteQuality
SIO_000300: 1.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8515
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99592277251469e-5
allele num: 66712
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.92e1

FS
type: SiteQuality
SIO_000300: 1.3259e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.893e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

DP
type: SiteQuality
SIO_000300: 1.910387e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.776e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

GenotypeQuality
all individuals: 8513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9084
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.176e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 1.910011e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.295e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

QD
type: SiteQuality
SIO_000300: 6.92e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43762
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496537665997182e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.88e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.439e1

MQRankSum
type: SiteQuality
SIO_000300: -7.66e-1

DP
type: SiteQuality
SIO_000300: 3.434005e6

GenotypeQuality
all individuals: 951
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.148e0

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

DP
type: SiteQuality
SIO_000300: 3.433867e6

VQSLOD
type: SiteQuality
SIO_000300: 4.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.539999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43764
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498980693128672e-4
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.289e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 1.173e0

DP
type: SiteQuality
SIO_000300: 3.434116e6

MQRankSum
type: SiteQuality
SIO_000300: -5.945e0

QD
type: SiteQuality
SIO_000300: 5.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.329e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 3.433833e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.362e0

FS
type: SiteQuality
SIO_000300: 1.873e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

DP
type: SiteQuality
SIO_000300: 3.965623e6

QD
type: SiteQuality
SIO_000300: 1.605e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.1e0

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.33e-2

GenotypeQuality
all individuals: 2122
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 45103
bin: 9.75e1
variant carriers: 12454

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 849
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variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 7.75e1
variant carriers: 2

South Asian
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allele count: 1590
allele frequency: 9.631693724254907e-2
allele num: 16508
num of homozygotes: 106

East Asian
type: Population
allele count: 2942
allele frequency: 3.403516890328552e-1
allele num: 8644
num of homozygotes: 494

Latino
type: Population
allele count: 1939
allele frequency: 1.674727932285369e-1
allele num: 11578
num of homozygotes: 172

European (Non-Finnish)
type: Population
allele count: 5694
allele frequency: 8.537499625153687e-2
allele num: 66694
num of homozygotes: 268

European (Finnish)
type: Population
allele count: 535
allele frequency: 8.088902328394315e-2
allele num: 6614
num of homozygotes: 21

African
type: Population
allele count: 779
allele frequency: 7.490384615384615e-2
allele num: 10400
num of homozygotes: 28

Other
type: Population
allele count: 91
allele frequency: 1.004415011037528e-1
allele num: 906
num of homozygotes: 5

QD
type: SiteQuality
SIO_000300: 1.605e1

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

DP
type: SiteQuality
SIO_000300: 3.965623e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.33e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.1e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 45103
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2122
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.605e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.48e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

DP
type: SiteQuality
SIO_000300: 3.965623e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.33e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 7815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
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variant carriers: 0

GenotypeQuality
all individuals: 40767
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

DP
type: SiteQuality
SIO_000300: 3.11573e6

FS
type: SiteQuality
SIO_000300: 1.1144e1

VQSLOD
type: SiteQuality
SIO_000300: -1.222e0

QD
type: SiteQuality
SIO_000300: 1.91e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.057e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.92e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1131e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

DP
type: SiteQuality
SIO_000300: 3.114988e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.337e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
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QD
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SIO_000300: 1.345e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

FS
type: SiteQuality
SIO_000300: 4.19e-1

DP
type: SiteQuality
SIO_000300: 3.114706e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.885170225043277e-4
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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MQ
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SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1141
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.528e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
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African
type: Population
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000300030003e-5
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.113925e6

VQSLOD
type: SiteQuality
SIO_000300: -1.088e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e0

MQRankSum
type: SiteQuality
SIO_000300: -1.785e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.62e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 31

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2291
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 2.981916121585225e-3
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.467e1

DP
type: SiteQuality
SIO_000300: 3.113908e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.421e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 1.617e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 3.11174e6

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00507858280494e-5
allele num: 66554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

FS
type: SiteQuality
SIO_000300: 3.202e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 3.109756e6

VQSLOD
type: SiteQuality
SIO_000300: 7.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 139
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
type: Population
allele count: 1
allele frequency: 6.139489194499017e-5
allele num: 16288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.843e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.872e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.176e1

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 3.098299e6

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 243
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.161429451632779e-5
allele num: 16230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 2.662e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.827e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

DP
type: SiteQuality
SIO_000300: 3.091645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.324e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.459e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.74e-1

QD
type: SiteQuality
SIO_000300: 1.599e1

VQSLOD
type: SiteQuality
SIO_000300: -1.649e0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

DP
type: SiteQuality
SIO_000300: 3.05095e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 3.033e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1094
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GenotypeQuality
all individuals: 1042
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.277139208173691e-4
allele num: 15660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65946
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.823e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.447453255963895e-5
allele num: 15510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.266e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.990842126219391e-4
allele num: 10046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 1.1823e1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.266e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.04319e6

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3694
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GenotypeQuality
all individuals: 2751
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2780
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GenotypeQuality
all individuals: 1438
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21713729308666e-4
allele num: 8216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
SIO_000300: 1.436e1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.758226e6

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569760140650509e-5
allele num: 63704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.664e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 3.058e0

DP
type: SiteQuality
SIO_000300: 1.781609e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

GenotypeQuality
all individuals: 910
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545165178157545e-5
allele num: 64718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

DP
type: SiteQuality
SIO_000300: 1.855458e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

FS
type: SiteQuality
SIO_000300: 7.98e0

VQSLOD
type: SiteQuality
SIO_000300: -1.594e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

QD
type: SiteQuality
SIO_000300: 9.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40531
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542590935735662e-5
allele num: 64826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 1.859622e6

FS
type: SiteQuality
SIO_000300: 4.175e0

VQSLOD
type: SiteQuality
SIO_000300: -2.029e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.85e1

QD
type: SiteQuality
SIO_000300: 1.596e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.974e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

GenotypeQuality
all individuals: 41285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 494
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64998
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.560596795890913e-4
allele num: 16354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.869484e6

MQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.846e1

FS
type: SiteQuality
SIO_000300: 7.392e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.495281370150297e-4
allele num: 11444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.392e0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.869484e6

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
all individuals: 43053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2743
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 987
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526298116548124e-5
allele num: 65518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.887263e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.13e-1

MQ
type: SiteQuality
SIO_000300: 5.799e1

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44988
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6476
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.641218594489623e-4
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 4.76e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

VQSLOD
type: SiteQuality
SIO_000300: -1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.5e-2

QD
type: SiteQuality
SIO_000300: 1.03e1

MQRankSum
type: SiteQuality
SIO_000300: 7.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.912147e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6484
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.64e0

MQ
type: SiteQuality
SIO_000300: 5.771e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

DP
type: SiteQuality
SIO_000300: 1.915611e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 6483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

DP
type: SiteQuality
SIO_000300: 1.916282e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.379e0

VQSLOD
type: SiteQuality
SIO_000300: -2.062e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.11e0

QD
type: SiteQuality
SIO_000300: 1.364e1

MQRankSum
type: SiteQuality
SIO_000300: 9.23e-1

MQ
type: SiteQuality
SIO_000300: 5.797e1

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2741
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1819
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

DP
type: SiteQuality
SIO_000300: 1.917611e6

MQ
type: SiteQuality
SIO_000300: 5.87e1

VQSLOD
type: SiteQuality
SIO_000300: -9.048e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.871e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 6.26e-1

QD
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SIO_000300: 1.156e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.481e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 1206
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002462018855461e-5
allele num: 66612
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

FS
type: SiteQuality
SIO_000300: 3.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.609e0

MQRankSum
type: SiteQuality
SIO_000300: -7.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.071e0

MQ
type: SiteQuality
SIO_000300: 5.792e1

DP
type: SiteQuality
SIO_000300: 1.918044e6

QD
type: SiteQuality
SIO_000300: 1.104e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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African
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allele frequency: 1.929012345679012e-4
allele num: 10368
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.041e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10342
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.761e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.673e0

DP
type: SiteQuality
SIO_000300: 1.916464e6

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.81e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.508e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.663e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.915716e6

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

FS
type: SiteQuality
SIO_000300: 6.568e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.624e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.627e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.915195e6

VQSLOD
type: SiteQuality
SIO_000300: -1.857e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.433e0

MQRankSum
type: SiteQuality
SIO_000300: -4.22e-1

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.016e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505298651252408e-5
allele num: 66432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 4.706e0

QD
type: SiteQuality
SIO_000300: 8.26e0

DP
type: SiteQuality
SIO_000300: 1.879285e6

BaseQRankSum
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MQRankSum
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SIO_000300: -1.315e0

MQ
type: SiteQuality
SIO_000300: 5.799e1

VQSLOD
type: SiteQuality
SIO_000300: -2.423e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01504507492387e-5
allele num: 66334
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 4.981e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.902951079421667e-5
allele num: 10098
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66266
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11548
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8616
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VQSLOD
type: SiteQuality
SIO_000300: -2.761e0

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.882e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.54273372415921e-4
allele num: 6482
num of homozygotes: 0

Latino
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allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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African
type: Population
allele count: 1
allele frequency: 9.966115208291808e-5
allele num: 10034
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.06446526577519e-5
allele num: 65958
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.857133e6

QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

East Asian
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allele frequency: 1.215657670799903e-4
allele num: 8226
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African
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16022
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.370238246910434e-5
allele num: 62792
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European (Finnish)
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.847e1

FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.354047528275512e-5
allele num: 15738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.836064e6

MQ
type: SiteQuality
SIO_000300: 5.82e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

MQRankSum
type: SiteQuality
SIO_000300: -2.113e0

VQSLOD
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 8.510999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

QD
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 5489
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 13090
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3263
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.759889604415823e-4
allele num: 10870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.271180896303566e-5
allele num: 61140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.503755633450175e-4
allele num: 7988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.026e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.113e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

QD
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 1.836064e6

MQ
type: SiteQuality
SIO_000300: 5.82e1

FS
type: SiteQuality
SIO_000300: 8.510999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 32

GenotypeQuality
all individuals: 7056
bin: 3.25e1
variant carriers: 48

GenotypeQuality
all individuals: 2187
bin: 1.25e1
variant carriers: 30

GenotypeQuality
all individuals: 5678
bin: 2.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1986
bin: 4.25e1
variant carriers: 31

GenotypeQuality
all individuals: 3806
bin: 6.25e1
variant carriers: 30

GenotypeQuality
all individuals: 1085
bin: 7.75e1
variant carriers: 34

GenotypeQuality
all individuals: 1967
bin: 4.75e1
variant carriers: 33

European (Non-Finnish)
type: Population
allele count: 572
allele frequency: 1.105784101453758e-2
allele num: 51728
num of homozygotes: 0

South Asian
type: Population
allele count: 144
allele frequency: 1.139420794429498e-2
allele num: 12638
num of homozygotes: 0

Latino
type: Population
allele count: 120
allele frequency: 1.520527116066903e-2
allele num: 7892
num of homozygotes: 0

African
type: Population
allele count: 80
allele frequency: 1.068090787716956e-2
allele num: 7490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 106
allele frequency: 1.924473493100944e-2
allele num: 5508
num of homozygotes: 0

East Asian
type: Population
allele count: 79
allele frequency: 1.146256529309344e-2
allele num: 6892
num of homozygotes: 0

Other
type: Population
allele count: 13
allele frequency: 1.81058495821727e-2
allele num: 718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

DP
type: SiteQuality
SIO_000300: 1.83041e6

FS
type: SiteQuality
SIO_000300: 6.586e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

QD
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 2187
bin: 1.25e1
variant carriers: 13

GenotypeQuality
all individuals: 3284
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 7056
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 869
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 858
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1967
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2487
bin: 9.75e1
variant carriers: 127

European (Non-Finnish)
type: Population
allele count: 127
allele frequency: 2.455150015465512e-3
allele num: 51728
num of homozygotes: 0

Latino
type: Population
allele count: 44
allele frequency: 5.575266092245312e-3
allele num: 7892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.904865649963689e-3
allele num: 5508
num of homozygotes: 0

South Asian
type: Population
allele count: 44
allele frequency: 3.481563538534578e-3
allele num: 12638
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.67022696929239e-3
allele num: 7490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.901915264074289e-3
allele num: 6892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

QD
type: SiteQuality
SIO_000300: 2.47e0

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

FS
type: SiteQuality
SIO_000300: 6.586e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

DP
type: SiteQuality
SIO_000300: 1.83041e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 741
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3806
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2167
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7056
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4858
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2487
bin: 9.75e1
variant carriers: 16

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.815541031227306e-4
allele num: 5508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.450957632037145e-4
allele num: 6892
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 7.602635580334517e-4
allele num: 7892
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.675567423230974e-4
allele num: 7490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.319826786266625e-4
allele num: 51728
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.785515320334262e-3
allele num: 718
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 8.703908846336445e-4
allele num: 12638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

QD
type: SiteQuality
SIO_000300: 2.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

FS
type: SiteQuality
SIO_000300: 6.586e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.83041e6

MQ
type: SiteQuality
SIO_000300: 5.833e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

GenotypeQuality
all individuals: 3284
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.450957632037145e-4
allele num: 6892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.335113484646195e-4
allele num: 7490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.933188988555521e-5
allele num: 51728
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.912644405760406e-5
allele num: 12638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

DP
type: SiteQuality
SIO_000300: 1.83041e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

FS
type: SiteQuality
SIO_000300: 6.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
all individuals: 2187
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1967
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7056
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 741
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.352872896111434e-4
allele num: 6892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.815541031227306e-4
allele num: 5508
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.373793321728121e-4
allele num: 12638
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.67022696929239e-4
allele num: 7490
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 5.068423720223011e-4
allele num: 7892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.126507887411073e-4
allele num: 51728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.833e1

FS
type: SiteQuality
SIO_000300: 6.586e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

DP
type: SiteQuality
SIO_000300: 1.83041e6

QD
type: SiteQuality
SIO_000300: 2.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

GenotypeQuality
all individuals: 2058
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5678
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7056
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.933188988555521e-5
allele num: 51728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

QD
type: SiteQuality
SIO_000300: 2.47e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.069e-1

FS
type: SiteQuality
SIO_000300: 6.586e0

DP
type: SiteQuality
SIO_000300: 1.83041e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 2363
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1854
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11278
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1241
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55976
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.905850962454736e-4
allele num: 10494
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.50501002004008e-4
allele num: 7984
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.630420368651372e-5
allele num: 15082
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.8e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.825393e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

FS
type: SiteQuality
SIO_000300: 1.5999e1

QD
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -2.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3249
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1871
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.579226171301764e-5
allele num: 55878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.097e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.758e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

FS
type: SiteQuality
SIO_000300: 6.576e0

QD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -6.47e-1

DP
type: SiteQuality
SIO_000300: 1.825005e6

GenotypeQuality
all individuals: 3695
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5598
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 8.780732563973909e-4
allele num: 7972
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.097e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.47e-1

DP
type: SiteQuality
SIO_000300: 1.825005e6

QD
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 6.576e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

MQ
type: SiteQuality
SIO_000300: 5.758e1

GenotypeQuality
all individuals: 782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5598
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3249
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.254390366281987e-4
allele num: 7972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.158452342603529e-5
allele num: 55878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.758e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.097e-1

QD
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

FS
type: SiteQuality
SIO_000300: 6.576e0

MQRankSum
type: SiteQuality
SIO_000300: -6.47e-1

DP
type: SiteQuality
SIO_000300: 1.825005e6

GenotypeQuality
all individuals: 636
bin: 4.75e1
variant carriers: 49

GenotypeQuality
all individuals: 367
bin: 7.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1877
bin: 1.75e1
variant carriers: 46

GenotypeQuality
all individuals: 503
bin: 5.25e1
variant carriers: 46

GenotypeQuality
all individuals: 4176
bin: 9.75e1
variant carriers: 275

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 35

GenotypeQuality
all individuals: 576
bin: 6.25e1
variant carriers: 35

GenotypeQuality
all individuals: 2081
bin: 2.75e1
variant carriers: 48

European (Finnish)
type: Population
allele count: 40
allele frequency: 1.934235976789168e-2
allele num: 2068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 590
allele frequency: 2.91646070192783e-2
allele num: 20230
num of homozygotes: 0

Latino
type: Population
allele count: 56
allele frequency: 1.990049751243781e-2
allele num: 2814
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 3.92156862745098e-3
allele num: 5610
num of homozygotes: 0

South Asian
type: Population
allele count: 41
allele frequency: 1.108108108108108e-2
allele num: 3700
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 1.6e-2
allele num: 250
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 1.299326275264677e-2
allele num: 2078
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

MQ
type: SiteQuality
SIO_000300: 5.796e1

FS
type: SiteQuality
SIO_000300: 5.424e0

QD
type: SiteQuality
SIO_000300: 4.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.742964e6

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 4202
bin: 7.5e0
variant carriers: 13

GenotypeQuality
all individuals: 576
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 636
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2081
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 363
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1994
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 6
allele frequency: 2.901353965183753e-3
allele num: 2068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 108
allele frequency: 5.338606030647553e-3
allele num: 20230
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 4.864864864864865e-3
allele num: 3700
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 4.264392324093817e-3
allele num: 2814
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 5.293551491819056e-3
allele num: 2078
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.06951871657754e-3
allele num: 5610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.796e1

FS
type: SiteQuality
SIO_000300: 5.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

DP
type: SiteQuality
SIO_000300: 1.742964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 4.18e0

GenotypeQuality
all individuals: 459
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1199
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32878
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2081
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 5.931784478497281e-4
allele num: 20230
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.77683013503909e-3
allele num: 2814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.835589941972921e-4
allele num: 2068
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.702702702702703e-4
allele num: 3700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.424e0

MQ
type: SiteQuality
SIO_000300: 5.796e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

DP
type: SiteQuality
SIO_000300: 1.742964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

QD
type: SiteQuality
SIO_000300: 4.18e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 36

GenotypeQuality
all individuals: 636
bin: 4.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1877
bin: 1.75e1
variant carriers: 20

GenotypeQuality
all individuals: 1994
bin: 3.25e1
variant carriers: 24

GenotypeQuality
all individuals: 1199
bin: 3.75e1
variant carriers: 30

GenotypeQuality
all individuals: 459
bin: 6.75e1
variant carriers: 27

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 42

GenotypeQuality
all individuals: 4176
bin: 9.75e1
variant carriers: 1816

African
type: Population
allele count: 2185
allele frequency: 3.894830659536542e-1
allele num: 5610
num of homozygotes: 244

Other
type: Population
allele count: 12
allele frequency: 4.8e-2
allele num: 250
num of homozygotes: 0

Latino
type: Population
allele count: 116
allele frequency: 4.12224591329069e-2
allele num: 2814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.835589941972921e-4
allele num: 2068
num of homozygotes: 0

East Asian
type: Population
allele count: 22
allele frequency: 1.058710298363811e-2
allele num: 2078
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 2.702702702702703e-3
allele num: 3700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 73
allele frequency: 3.608502224419179e-3
allele num: 20230
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

DP
type: SiteQuality
SIO_000300: 1.742964e6

MQ
type: SiteQuality
SIO_000300: 5.796e1

QD
type: SiteQuality
SIO_000300: 4.18e0

FS
type: SiteQuality
SIO_000300: 5.424e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

African
type: Population
allele count: 299
allele frequency: 5.329768270944742e-2
allele num: 5610
num of homozygotes: 0

Other
type: Population
allele count: 40
allele frequency: 1.6e-1
allele num: 250
num of homozygotes: 0

East Asian
type: Population
allele count: 334
allele frequency: 1.607314725697786e-1
allele num: 2078
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

FS
type: SiteQuality
SIO_000300: 5.424e0

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

MQ
type: SiteQuality
SIO_000300: 5.796e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 4.18e0

DP
type: SiteQuality
SIO_000300: 1.742964e6

GenotypeQuality
all individuals: 1199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.943153732081068e-5
allele num: 20230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2068
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.18e0

FS
type: SiteQuality
SIO_000300: 5.424e0

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.742964e6

MQ
type: SiteQuality
SIO_000300: 5.796e1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.636e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1