14-56107620-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107620
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107620
    reference: chr 14
allele count: 1
allele frequency: 8.568539749455898e-6
allele num: 116706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1984-31T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-56107625-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107625
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107625
    reference: chr 14
allele count: 1
allele frequency: 8.532714427113554e-6
allele num: 117196
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1984-26T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-56107637-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107637
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107637
    reference: chr 14
allele count: 1
allele frequency: 8.445232666159953e-6
allele num: 118410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1984-14C>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7102
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-56107652-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107652
    reference: chr 14
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1985C>A
  hgvsp: ENSP00000378725.3:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1985C>A
  hgvsp: ENSP00000378719.1:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1985C>A
  hgvsp: ENSP00000394992.2:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1985C>A
  hgvsp: ENSP00000388807.1:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1985C>A
  hgvsp: ENSP00000378722.1:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1985C>A
  hgvsp: ENSP00000391964.2:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1985C>A
  hgvsp: ENSP00000378720.3:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1985C>A
  hgvsp: ENSP00000432149.1:p.Ala662Asp
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala662Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

14-56107652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107652
    reference: chr 14
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1985C>T
  hgvsp: ENSP00000378725.3:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1985C>T
  hgvsp: ENSP00000378719.1:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1985C>T
  hgvsp: ENSP00000388807.1:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1985C>T
  hgvsp: ENSP00000391964.2:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1985C>T
  hgvsp: ENSP00000394992.2:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1985C>T
  hgvsp: ENSP00000378722.1:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1985C>T
  hgvsp: ENSP00000432149.1:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1985C>T
  hgvsp: ENSP00000378720.3:p.Ala662Val
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala662Val
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

14-56107656-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107656
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107656
    reference: chr 14
allele count: 13
allele frequency: 1.08699287601592e-4
allele num: 119596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1989T>G
  hgvsp: ENST00000413890.2:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1989T>G
  hgvsp: ENST00000395309.3:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1989T>G
  hgvsp: ENST00000438792.2:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1989T>G
  hgvsp: ENST00000395308.1:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1989T>G
  hgvsp: ENST00000416613.1:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1989T>G
  hgvsp: ENST00000395311.1:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1989T>G
  hgvsp: ENST00000395314.3:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1989T>G
  hgvsp: ENST00000459737.1:c.1989T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30432
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35807
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala663Ala
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

14-56107657-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107657
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107657
    reference: chr 14
allele count: 2
allele frequency: 1.671905303283622e-5
allele num: 119624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1990G>C
  hgvsp: ENSP00000394992.2:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1990G>C
  hgvsp: ENSP00000378725.3:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1990G>C
  hgvsp: ENSP00000391964.2:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1990G>C
  hgvsp: ENSP00000388807.1:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1990G>C
  hgvsp: ENSP00000378722.1:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1990G>C
  hgvsp: ENSP00000378719.1:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1990G>C
  hgvsp: ENSP00000432149.1:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1990G>C
  hgvsp: ENSP00000378720.3:p.Ala664Pro
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala664Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-56107664-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107664
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107664
    reference: chr 14
allele count: 4
allele frequency: 3.338786684918701e-5
allele num: 119804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1997A>G
  hgvsp: ENSP00000394992.2:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1997A>G
  hgvsp: ENSP00000378725.3:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1997A>G
  hgvsp: ENSP00000378720.3:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1997A>G
  hgvsp: ENSP00000391964.2:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1997A>G
  hgvsp: ENSP00000378722.1:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1997A>G
  hgvsp: ENSP00000432149.1:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1997A>G
  hgvsp: ENSP00000388807.1:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1997A>G
  hgvsp: ENSP00000378719.1:p.His666Arg
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13835
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His666Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

14-56107666-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107666
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107666
    reference: chr 14
allele count: 541
allele frequency: 4.515558226495726e-3
allele num: 119808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1999G>C
  hgvsp: ENSP00000388807.1:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1999G>C
  hgvsp: ENSP00000378725.3:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1999G>C
  hgvsp: ENSP00000378722.1:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1999G>C
  hgvsp: ENSP00000378719.1:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1999G>C
  hgvsp: ENSP00000378720.3:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1999G>C
  hgvsp: ENSP00000391964.2:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1999G>C
  hgvsp: ENSP00000394992.2:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1999G>C
  hgvsp: ENSP00000432149.1:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29959
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 2.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu667Gln
num of homozygotes: 9
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-56107669-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107669
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107669
    reference: chr 14
allele count: 1
allele frequency: 8.346688034188035e-6
allele num: 119808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2002T>C
  hgvsp: ENST00000459737.1:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2002T>C
  hgvsp: ENST00000413890.2:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2002T>C
  hgvsp: ENST00000395309.3:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2002T>C
  hgvsp: ENST00000438792.2:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2002T>C
  hgvsp: ENST00000395314.3:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2002T>C
  hgvsp: ENST00000416613.1:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2002T>C
  hgvsp: ENST00000395311.1:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2002T>C
  hgvsp: ENST00000395308.1:c.2002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14085
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu668Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-56107686-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107686
    reference: chr 14
allele count: 2
allele frequency: 1.671122994652406e-5
allele num: 119680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2019A>G
  hgvsp: ENST00000395311.1:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2019A>G
  hgvsp: ENST00000416613.1:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2019A>G
  hgvsp: ENST00000459737.1:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2019A>G
  hgvsp: ENST00000395314.3:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2019A>G
  hgvsp: ENST00000395309.3:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2019A>G
  hgvsp: ENST00000438792.2:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2019A>G
  hgvsp: ENST00000413890.2:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2019A>G
  hgvsp: ENST00000395308.1:c.2019A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14171
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6593
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.75e1
  variant carriers: 0
hgvs: c.2019A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/14-56107686-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107686
    reference: chr 14
allele count: 1
allele frequency: 8.355614973262032e-6
allele num: 119680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2019A>C
  hgvsp: ENSP00000391964.2:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2019A>C
  hgvsp: ENSP00000378722.1:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2019A>C
  hgvsp: ENSP00000388807.1:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2019A>C
  hgvsp: ENSP00000432149.1:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2019A>C
  hgvsp: ENSP00000378720.3:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2019A>C
  hgvsp: ENSP00000378725.3:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2019A>C
  hgvsp: ENSP00000394992.2:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2019A>C
  hgvsp: ENSP00000378719.1:p.Gln673His
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln673His
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-56107691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107691
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107691
    reference: chr 14
allele count: 2
allele frequency: 1.671486118307788e-5
allele num: 119654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+3G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 8.25e1
  variant carriers: 0
hgvs: c.2021+3G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

14-56107691-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107691
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107691
    reference: chr 14
allele count: 6
allele frequency: 5.014458354923363e-5
allele num: 119654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+3G>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2021+3G>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

14-56107698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107698
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107698
    reference: chr 14
allele count: 1
allele frequency: 8.363581620193032e-6
allele num: 119566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14247
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7097
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6528
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

14-56107700-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107700
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107700
    reference: chr 14
allele count: 6
allele frequency: 5.019324398935903e-5
allele num: 119538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+12A>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-56107702-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107702
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107702
    reference: chr 14
allele count: 1
allele frequency: 8.368621018628551e-6
allele num: 119494
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+14T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-56107704-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107704
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107704
    reference: chr 14
allele count: 7
allele frequency: 5.860879466827422e-5
allele num: 119436
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+16T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

14-56107711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107711
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107711
    reference: chr 14
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+23A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13841
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7095
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

14-56107714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107714
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107714
    reference: chr 14
allele count: 4
allele frequency: 3.359142746771024e-5
allele num: 119078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+26C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22585
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13685
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7094
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

14-56107715-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107715
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107715
    reference: chr 14
allele count: 400
allele frequency: 3.360102147105272e-3
allele num: 119044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+27G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 3.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 13529
  bin: 2.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 22053
  bin: 2.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

14-56107718-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107718
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107718
    reference: chr 14
allele count: 1
allele frequency: 8.407317729351627e-6
allele num: 118944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+30C>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13379
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6047
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

14-56107733-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107733
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107733
    reference: chr 14
allele count: 11
allele frequency: 9.292895159246431e-5
allele num: 118370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+45A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18683
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11561
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

14-56107735-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107735
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107735
    reference: chr 14
allele count: 1
allele frequency: 8.465250148141878e-6
allele num: 118130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2021+47T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

14-56107809-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107809
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107809
    reference: chr 14
allele count: 1
allele frequency: 9.189656123067874e-6
allele num: 108818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-36T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5535
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-56107815-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107815
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107815
    reference: chr 14
allele count: 1
allele frequency: 9.171451106994149e-6
allele num: 109034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-30G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS

14-56107816-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107816
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107816
    reference: chr 14
allele count: 3
allele frequency: 2.748460861917326e-5
allele num: 109152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-29T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12710
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13969
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

14-56107821-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107821
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107820
    reference: chr 14
allele count: 2
allele frequency: 1.830831197363603e-5
allele num: 109240
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-22delA
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: TA
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

14-56107823-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107824
    reference: chr 14
allele count: 444
allele frequency: 5.556528921482742e-3
allele num: 79906
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-12dupT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 1.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13420
  bin: 2.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11222
  bin: 2.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 1.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 7.5e0
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7662
  bin: 2.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 1.25e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 11077
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

14-56107823-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107822
    reference: chr 14
allele count: 550
allele frequency: 6.883087627962857e-3
allele num: 79906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-12delT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 11222
  bin: 2.75e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 3.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13420
  bin: 2.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 1.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 5.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 7662
  bin: 2.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 3894
  bin: 2.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 10612
  bin: 2.5e0
  variant carriers: 38
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: AT
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

14-56107833-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107833
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107834
    reference: chr 14
allele count: 1
allele frequency: 8.968609865470853e-6
allele num: 111500
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-11dupC
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19635
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

14-56107841-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107841
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107841
    reference: chr 14
allele count: 2
allele frequency: 1.768659356207994e-5
allele num: 113080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-4A>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24585
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15301
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 9.75e1
  variant carriers: 2
hgvs: c.2022-4A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

14-56107842-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107842
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107842
    reference: chr 14
allele count: 1
allele frequency: 8.826904404625297e-6
allele num: 113290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2022-3T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5711
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
hgvs: c.2022-3T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-56107849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107849
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107849
    reference: chr 14
allele count: 1
allele frequency: 8.769775844529415e-6
allele num: 114028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2026T>C
  hgvsp: ENSP00000391964.2:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2026T>C
  hgvsp: ENSP00000378725.3:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2026T>C
  hgvsp: ENSP00000432149.1:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2026T>C
  hgvsp: ENSP00000394992.2:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2026T>C
  hgvsp: ENSP00000378720.3:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2026T>C
  hgvsp: ENSP00000388807.1:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2026T>C
  hgvsp: ENSP00000378722.1:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2026T>C
  hgvsp: ENSP00000378719.1:p.Tyr676His
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4970
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr676His
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-56107863-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107863
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107863
    reference: chr 14
allele count: 1
allele frequency: 8.690362388111584e-6
allele num: 115070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2040T>C
  hgvsp: ENST00000438792.2:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2040T>C
  hgvsp: ENST00000416613.1:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2040T>C
  hgvsp: ENST00000395311.1:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2040T>C
  hgvsp: ENST00000395309.3:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2040T>C
  hgvsp: ENST00000413890.2:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2040T>C
  hgvsp: ENST00000395308.1:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2040T>C
  hgvsp: ENST00000459737.1:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2040T>C
  hgvsp: ENST00000395314.3:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29623
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp680Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-56107874-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107874
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107874
    reference: chr 14
allele count: 1
allele frequency: 8.650070065567531e-6
allele num: 115606
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2051T>G
  hgvsp: ENSP00000378720.3:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2051T>G
  hgvsp: ENSP00000394992.2:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2051T>G
  hgvsp: ENSP00000388807.1:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2051T>G
  hgvsp: ENSP00000391964.2:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2051T>G
  hgvsp: ENSP00000378722.1:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2051T>G
  hgvsp: ENSP00000432149.1:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2051T>G
  hgvsp: ENSP00000378719.1:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2051T>G
  hgvsp: ENSP00000378725.3:p.Leu684Trp
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43198
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu684Trp
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/14-56107876-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107876
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107876
    reference: chr 14
allele count: 3
allele frequency: 2.594078583287217e-5
allele num: 115648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2053C>A
  hgvsp: ENSP00000394992.2:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2053C>A
  hgvsp: ENSP00000432149.1:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2053C>A
  hgvsp: ENSP00000378722.1:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2053C>A
  hgvsp: ENSP00000388807.1:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2053C>A
  hgvsp: ENSP00000378725.3:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2053C>A
  hgvsp: ENSP00000378720.3:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2053C>A
  hgvsp: ENSP00000391964.2:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2053C>A
  hgvsp: ENSP00000378719.1:p.Leu685Met
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16907
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30495
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43180
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu685Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

14-56107890-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107890
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107890
    reference: chr 14
allele count: 7
allele frequency: 6.060711007982822e-5
allele num: 115498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2067A>G
  hgvsp: ENST00000395308.1:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2067A>G
  hgvsp: ENST00000395311.1:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2067A>G
  hgvsp: ENST00000438792.2:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2067A>G
  hgvsp: ENST00000395309.3:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2067A>G
  hgvsp: ENST00000416613.1:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2067A>G
  hgvsp: ENST00000395314.3:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2067A>G
  hgvsp: ENST00000459737.1:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2067A>G
  hgvsp: ENST00000413890.2:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30209
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu689Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-56107906-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107906
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107906
    reference: chr 14
allele count: 1
allele frequency: 8.822387691004694e-6
allele num: 113348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2083A>G
  hgvsp: ENSP00000391964.2:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2083A>G
  hgvsp: ENSP00000378722.1:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2083A>G
  hgvsp: ENSP00000394992.2:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2083A>G
  hgvsp: ENSP00000388807.1:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2083A>G
  hgvsp: ENSP00000378720.3:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2083A>G
  hgvsp: ENSP00000378725.3:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2083A>G
  hgvsp: ENSP00000378719.1:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2083A>G
  hgvsp: ENSP00000432149.1:p.Asn695Asp
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26711
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn695Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/14-56107910-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107910
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107910
    reference: chr 14
allele count: 1
allele frequency: 8.853318223670232e-6
allele num: 112952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2087A>C
  hgvsp: ENSP00000391964.2:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2087A>C
  hgvsp: ENSP00000378720.3:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2087A>C
  hgvsp: ENSP00000388807.1:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2087A>C
  hgvsp: ENSP00000378725.3:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2087A>C
  hgvsp: ENSP00000378722.1:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2087A>C
  hgvsp: ENSP00000432149.1:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2087A>C
  hgvsp: ENSP00000394992.2:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2087A>C
  hgvsp: ENSP00000378719.1:p.Lys696Thr
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys696Thr
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-56107919-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107919
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107919
    reference: chr 14
allele count: 1
allele frequency: 8.941824489868913e-6
allele num: 111834
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2096A>C
  hgvsp: ENSP00000378725.3:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2096A>C
  hgvsp: ENSP00000432149.1:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2096A>C
  hgvsp: ENSP00000388807.1:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2096A>C
  hgvsp: ENSP00000394992.2:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2096A>C
  hgvsp: ENSP00000378720.3:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2096A>C
  hgvsp: ENSP00000391964.2:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2096A>C
  hgvsp: ENSP00000378719.1:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2096A>C
  hgvsp: ENSP00000378722.1:p.Glu699Ala
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16405
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu699Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-56107922-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107922
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107922
    reference: chr 14
allele count: 1
allele frequency: 8.996527340446587e-6
allele num: 111154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2099T>A
  hgvsp: ENSP00000378722.1:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2099T>A
  hgvsp: ENSP00000432149.1:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2099T>A
  hgvsp: ENSP00000391964.2:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2099T>A
  hgvsp: ENSP00000388807.1:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2099T>A
  hgvsp: ENSP00000378725.3:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2099T>A
  hgvsp: ENSP00000394992.2:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2099T>A
  hgvsp: ENSP00000378719.1:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2099T>A
  hgvsp: ENSP00000378720.3:p.Phe700Tyr
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7996
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe700Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

14-56107929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107929
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107929
    reference: chr 14
allele count: 1
allele frequency: 9.116601331023794e-6
allele num: 109690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+3G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
hgvs: c.2103+3G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

14-56107933-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107933
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107933
    reference: chr 14
allele count: 1
allele frequency: 9.191852342083978e-6
allele num: 108792
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+7G>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9987
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2103+7G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

14-56107936-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107936
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107936
    reference: chr 14
allele count: 1
allele frequency: 9.223050247177746e-6
allele num: 108424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+10T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

14-56107940-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107940
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107940
    reference: chr 14
allele count: 1
allele frequency: 9.314976619408685e-6
allele num: 107354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+14C>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11295
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

14-56107950-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107950
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107950
    reference: chr 14
allele count: 1
allele frequency: 9.508414947228297e-6
allele num: 105170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+24C>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13210
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2831
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

14-56107950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107950
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107950
    reference: chr 14
allele count: 1
allele frequency: 9.508414947228297e-6
allele num: 105170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+24C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-56107951-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107951
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107951
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 104784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+25A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5395
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-56107971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107971
    reference: chr 14
allele count: 2
allele frequency: 1.99860097931448e-5
allele num: 100070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+45G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15470
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14009
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4635
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

14-56107973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107973
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107973
    reference: chr 14
allele count: 1
allele frequency: 1.004157210852931e-5
allele num: 99586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+47A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7630
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11049
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

14-56107975-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56107975
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56107975
    reference: chr 14
allele count: 2
allele frequency: 2.025480545259363e-5
allele num: 98742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2103+49A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7634
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-56108361-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108361
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108361
    reference: chr 14
allele count: 1
allele frequency: 8.348220994106157e-6
allele num: 119786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-49T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

14-56108373-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108373
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108373
    reference: chr 14
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-37T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12051
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

14-56108378-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108378
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108378
    reference: chr 14
allele count: 1
allele frequency: 8.336807002917883e-6
allele num: 119950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-32A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24740
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-56108380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108380
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108380
    reference: chr 14
allele count: 1
allele frequency: 8.333472224537076e-6
allele num: 119998
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-30A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-56108381-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108381
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108381
    reference: chr 14
allele count: 1
allele frequency: 8.330556481172942e-6
allele num: 120040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-29A>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6885
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

14-56108385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108385
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108385
    reference: chr 14
allele count: 1
allele frequency: 8.325562808045825e-6
allele num: 120112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-25A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4096
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

14-56108398-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108398
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108398
    reference: chr 14
allele count: 2
allele frequency: 1.661764461505226e-5
allele num: 120354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-12T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-56108399-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108399
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108397
    reference: chr 14
allele count: 1
allele frequency: 8.30813199960121e-6
allele num: 120364
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-9_2104-8delTT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4187
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24737
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: CTT
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-56108402-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108402
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108402
    reference: chr 14
allele count: 1
allele frequency: 8.306061763875276e-6
allele num: 120394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104-8T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3641
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4188
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2104-8T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-56108410-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108410
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108410
    reference: chr 14
allele count: 1
allele frequency: 8.301510874979247e-6
allele num: 120460
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2104A>G
  hgvsp: ENSP00000388807.1:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2104A>G
  hgvsp: ENSP00000391964.2:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2104A>G
  hgvsp: ENSP00000378722.1:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2104A>G
  hgvsp: ENSP00000432149.1:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2104A>G
  hgvsp: ENSP00000394992.2:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2104A>G
  hgvsp: ENSP00000378719.1:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2104A>G
  hgvsp: ENSP00000378725.3:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2104A>G
  hgvsp: ENSP00000378720.3:p.Ile702Val
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile702Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/14-56108415-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108415
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108415
    reference: chr 14
allele count: 1
allele frequency: 8.298341991270144e-6
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2109A>C
  hgvsp: ENST00000395308.1:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2109A>C
  hgvsp: ENST00000438792.2:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2109A>C
  hgvsp: ENST00000395311.1:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2109A>C
  hgvsp: ENST00000413890.2:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2109A>C
  hgvsp: ENST00000395314.3:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2109A>C
  hgvsp: ENST00000395309.3:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2109A>C
  hgvsp: ENST00000416613.1:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2109A>C
  hgvsp: ENST00000459737.1:c.2109A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu703Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-56108424-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108424
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108424
    reference: chr 14
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2118A>C
  hgvsp: ENSP00000391964.2:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2118A>C
  hgvsp: ENSP00000378722.1:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2118A>C
  hgvsp: ENSP00000378725.3:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2118A>C
  hgvsp: ENSP00000378719.1:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2118A>C
  hgvsp: ENSP00000378720.3:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2118A>C
  hgvsp: ENSP00000388807.1:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2118A>C
  hgvsp: ENSP00000394992.2:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2118A>C
  hgvsp: ENSP00000432149.1:p.Gln706His
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3642
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln706His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

14-56108429-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108429
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108429
    reference: chr 14
allele count: 47
allele frequency: 3.897051507412689e-4
allele num: 120604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2123A>T
  hgvsp: ENSP00000378720.3:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2123A>T
  hgvsp: ENSP00000394992.2:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2123A>T
  hgvsp: ENSP00000378725.3:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2123A>T
  hgvsp: ENSP00000378722.1:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2123A>T
  hgvsp: ENSP00000432149.1:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2123A>T
  hgvsp: ENSP00000378719.1:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2123A>T
  hgvsp: ENSP00000388807.1:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2123A>T
  hgvsp: ENSP00000391964.2:p.Lys708Ile
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13571
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys708Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-56108430-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108430
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108430
    reference: chr 14
allele count: 47
allele frequency: 3.896922260546564e-4
allele num: 120608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2124A>C
  hgvsp: ENSP00000388807.1:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2124A>C
  hgvsp: ENSP00000378725.3:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2124A>C
  hgvsp: ENSP00000378719.1:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2124A>C
  hgvsp: ENSP00000394992.2:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2124A>C
  hgvsp: ENSP00000432149.1:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2124A>C
  hgvsp: ENSP00000391964.2:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2124A>C
  hgvsp: ENSP00000378722.1:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2124A>C
  hgvsp: ENSP00000378720.3:p.Lys708Asn
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5158
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys708Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-56108456-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108456
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108456
    reference: chr 14
allele count: 2
allele frequency: 1.659062629614268e-5
allele num: 120550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2150T>C
  hgvsp: ENSP00000378720.3:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2150T>C
  hgvsp: ENSP00000391964.2:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2150T>C
  hgvsp: ENSP00000388807.1:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2150T>C
  hgvsp: ENSP00000378719.1:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2150T>C
  hgvsp: ENSP00000394992.2:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2150T>C
  hgvsp: ENSP00000432149.1:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2150T>C
  hgvsp: ENSP00000378725.3:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2150T>C
  hgvsp: ENSP00000378722.1:p.Leu717Pro
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu717Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-56108463-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108463
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108463
    reference: chr 14
allele count: 2
allele frequency: 1.65953068472236e-5
allele num: 120516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2157T>C
  hgvsp: ENST00000395309.3:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2157T>C
  hgvsp: ENST00000395314.3:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2157T>C
  hgvsp: ENST00000395311.1:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2157T>C
  hgvsp: ENST00000438792.2:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2157T>C
  hgvsp: ENST00000459737.1:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2157T>C
  hgvsp: ENST00000416613.1:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2157T>C
  hgvsp: ENST00000395308.1:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2157T>C
  hgvsp: ENST00000413890.2:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr719Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/14-56108476-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108476
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108476
    reference: chr 14
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2170C>A
  hgvsp: ENSP00000378722.1:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2170C>A
  hgvsp: ENSP00000432149.1:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2170C>A
  hgvsp: ENSP00000378725.3:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2170C>A
  hgvsp: ENSP00000378719.1:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2170C>A
  hgvsp: ENSP00000378720.3:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2170C>A
  hgvsp: ENSP00000391964.2:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000452576
  ensembl transcript: ENST00000553360
  gene symbol: KTN1
  hgvsc: ENST00000553360.1:c.10C>A
  hgvsp: ENSP00000452576.1:p.Gln4Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2170C>A
  hgvsp: ENSP00000394992.2:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2170C>A
  hgvsp: ENSP00000388807.1:p.Gln724Lys
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln724Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

14-56108482-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108482
    reference: chr 14
allele count: 22
allele frequency: 1.828670224261467e-4
allele num: 120306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000452576
  ensembl transcript: ENST00000553360
  gene symbol: KTN1
  hgvsc: ENST00000553360.1:c.12+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2172+4A>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.2172+4A>T
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

14-56108515-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56108515
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56108515
    reference: chr 14
allele count: 1
allele frequency: 8.354079296920687e-6
allele num: 119702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000452576
  ensembl transcript: ENST00000553360
  gene symbol: KTN1
  hgvsc: ENST00000553360.1:c.12+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.2172+37G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8288
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6229
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559040878051823e-5
allele num: 64142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

DP
type: SiteQuality
SIO_000300: 1.754867e6

GenotypeQuality
all individuals: 1977
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32327
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.048136083966703e-5
allele num: 11052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

DP
type: SiteQuality
SIO_000300: 1.770546e6

FS
type: SiteQuality
SIO_000300: 4.673e0

QD
type: SiteQuality
SIO_000300: 1.627e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

GenotypeQuality
all individuals: 527
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65216
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.948269001193792e-5
allele num: 10052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.799823e6

MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.104e0

QD
type: SiteQuality
SIO_000300: 1.06e1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

FS
type: SiteQuality
SIO_000300: 1.1835e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.927e0

GenotypeQuality
all individuals: 978
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7107
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.150818058801821e-5
allele num: 16258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

DP
type: SiteQuality
SIO_000300: 1.819384e6

FS
type: SiteQuality
SIO_000300: 3.244e0

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

GenotypeQuality
all individuals: 2006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7107
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 3.244e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 1.016e1

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

DP
type: SiteQuality
SIO_000300: 1.819384e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6635
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7118
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.986239095712004e-4
allele num: 16278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 4.376e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.82061e6

QD
type: SiteQuality
SIO_000300: 1.454e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7106
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.035546246547066e-5
allele num: 65886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

FS
type: SiteQuality
SIO_000300: 1.775e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.002e0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.821507e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

GenotypeQuality
all individuals: 2007
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35980
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7112
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.545730044245106e-5
allele num: 65996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.111e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.21e-2

QD
type: SiteQuality
SIO_000300: 1.142e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

DP
type: SiteQuality
SIO_000300: 1.82334e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7556
bin: 9.75e1
variant carriers: 530

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 1

South Asian
type: Population
allele count: 345
allele frequency: 2.114229685010418e-2
allele num: 16318
num of homozygotes: 7

East Asian
type: Population
allele count: 13
allele frequency: 1.516565562295847e-3
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.969876049337819e-4
allele num: 65994
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.378378378378379e-3
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 160
allele frequency: 1.565864161284009e-2
allele num: 10218
num of homozygotes: 2

Latino
type: Population
allele count: 7
allele frequency: 6.20677425075368e-4
allele num: 11278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

DP
type: SiteQuality
SIO_000300: 1.839074e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e0

QD
type: SiteQuality
SIO_000300: 1.226e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7097
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65996
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.780907668231612e-5
allele num: 10224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.064e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

DP
type: SiteQuality
SIO_000300: 1.825437e6

VQSLOD
type: SiteQuality
SIO_000300: -1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.498e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7100
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.960015680125441e-4
allele num: 10204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.154e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.79e-1

DP
type: SiteQuality
SIO_000300: 1.817964e6

FS
type: SiteQuality
SIO_000300: 4.452e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 7.93e0

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6593
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 4.452e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.154e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

DP
type: SiteQuality
SIO_000300: 1.817964e6

QD
type: SiteQuality
SIO_000300: 7.93e0

GenotypeQuality
all individuals: 6580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7104
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034532985373551e-5
allele num: 65908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.139e1

FS
type: SiteQuality
SIO_000300: 1.821e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 1.817441e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7104
bin: 9.75e1
variant carriers: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.103598956120653e-5
allele num: 65908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 1.817441e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.139e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 1.821e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

GenotypeQuality
all individuals: 528
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.141751627564181e-5
allele num: 16282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.692e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.811311e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2797
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7101
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.114385538508278e-5
allele num: 65830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 1.083e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 8.675000000000001e0

DP
type: SiteQuality
SIO_000300: 1.808242e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

GenotypeQuality
all individuals: 7096
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519664458087654e-5
allele num: 65804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.471e-1

FS
type: SiteQuality
SIO_000300: 1.496e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.804281e6

QD
type: SiteQuality
SIO_000300: 7.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.96e-1

GenotypeQuality
all individuals: 32672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7101
bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.147792942333702e-5
allele num: 16266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.122422915526363e-5
allele num: 65772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.301e1

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

FS
type: SiteQuality
SIO_000300: 6.591e0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.799931e6

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
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variant carriers: 0

GenotypeQuality
all individuals: 6224
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523554147114388e-5
allele num: 65636
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 2.745e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.276e1

DP
type: SiteQuality
SIO_000300: 1.774531e6

GenotypeQuality
all individuals: 677
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 7.5e0
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GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 552
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 885
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variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.05008235222351e-5
allele num: 65572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233501911927963e-4
allele num: 16214
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

QD
type: SiteQuality
SIO_000300: 2.848e1

VQSLOD
type: SiteQuality
SIO_000300: -1.965e0

DP
type: SiteQuality
SIO_000300: 1.768133e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

GenotypeQuality
all individuals: 27031
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 572
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7426
bin: 9.75e1
variant carriers: 395

GenotypeQuality
all individuals: 1185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 19
allele frequency: 1.877470355731225e-3
allele num: 10120
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.233654083395016e-3
allele num: 16212
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 2.760954755967225e-3
allele num: 11228
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 269
allele frequency: 4.104238503554973e-3
allele num: 65542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 49
allele frequency: 7.517643448910709e-3
allele num: 6518
num of homozygotes: 1

East Asian
type: Population
allele count: 9
allele frequency: 1.0543580131209e-3
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.378378378378379e-3
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.285e0

QD
type: SiteQuality
SIO_000300: 1.306e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.768783e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 200
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GenotypeQuality
all individuals: 1013
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variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25775
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variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
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variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 1533
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variant carriers: 0

GenotypeQuality
all individuals: 7090
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527137228551358e-5
allele num: 65482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

MQRankSum
type: SiteQuality
SIO_000300: -1.706e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.24e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.836e0

DP
type: SiteQuality
SIO_000300: 1.755312e6

VQSLOD
type: SiteQuality
SIO_000300: -8.127e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 2006
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7101
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 17487
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variant carriers: 0

GenotypeQuality
all individuals: 1815
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variant carriers: 0

GenotypeQuality
all individuals: 4546
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variant carriers: 0

GenotypeQuality
all individuals: 2663
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variant carriers: 0

GenotypeQuality
all individuals: 886
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variant carriers: 0

GenotypeQuality
all individuals: 1931
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variant carriers: 0

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.359056806002144e-4
allele num: 11196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.607021100156639e-5
allele num: 65118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16128
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.946290033817386e-5
allele num: 10054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.677e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

QD
type: SiteQuality
SIO_000300: 1.481e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

MQRankSum
type: SiteQuality
SIO_000300: 9.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.716577e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 7093
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1804
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 5.75e1
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GenotypeQuality
all individuals: 1980
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variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
all individuals: 4892
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2608
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variant carriers: 0

GenotypeQuality
all individuals: 3652
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539029795616843e-5
allele num: 64976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

FS
type: SiteQuality
SIO_000300: 1.541e0

DP
type: SiteQuality
SIO_000300: 1.715057e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.485e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 8.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

GenotypeQuality
all individuals: 630
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
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variant carriers: 0

GenotypeQuality
all individuals: 427
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GenotypeQuality
all individuals: 1838
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GenotypeQuality
all individuals: 9845
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GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 6405
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13324
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10678
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.107419712070875e-4
allele num: 9030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.141e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

DP
type: SiteQuality
SIO_000300: 1.294304e6

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.315e0

GenotypeQuality
all individuals: 472
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 7.5e0
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GenotypeQuality
all individuals: 520
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variant carriers: 0

GenotypeQuality
all individuals: 10322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.5e0
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GenotypeQuality
all individuals: 4792
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6064
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variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669226146758363e-5
allele num: 59908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.085e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

DP
type: SiteQuality
SIO_000300: 1.317762e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.85e0

FS
type: SiteQuality
SIO_000300: 5.84e-1

GenotypeQuality
all individuals: 572
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4679
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6060
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59992
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.87396694214876e-4
allele num: 7744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.321408e6

FS
type: SiteQuality
SIO_000300: 1.814e0

QD
type: SiteQuality
SIO_000300: 1.561e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

GenotypeQuality
all individuals: 1522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.326790645064706e-5
allele num: 60118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7762
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.483e0

MQ
type: SiteQuality
SIO_000300: 6.09e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 1.346881e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.111e1

GenotypeQuality
all individuals: 4441
bin: 3.25e1
variant carriers: 64

GenotypeQuality
all individuals: 10612
bin: 2.5e0
variant carriers: 57

GenotypeQuality
all individuals: 712
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 927
bin: 5.75e1
variant carriers: 17

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3894
bin: 2.75e1
variant carriers: 61

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1819
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1987
bin: 4.75e1
variant carriers: 40

GenotypeQuality
all individuals: 2090
bin: 4.25e1
variant carriers: 31

GenotypeQuality
all individuals: 1389
bin: 5.25e1
variant carriers: 24

GenotypeQuality
all individuals: 1689
bin: 6.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.57653791130186e-4
allele num: 5592
num of homozygotes: 0

East Asian
type: Population
allele count: 32
allele frequency: 5.374538125629828e-3
allele num: 5954
num of homozygotes: 0

South Asian
type: Population
allele count: 117
allele frequency: 1.325028312570781e-2
allele num: 8830
num of homozygotes: 0

African
type: Population
allele count: 39
allele frequency: 5.637467476149176e-3
allele num: 6918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 214
allele frequency: 4.812665857059326e-3
allele num: 44466
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 4.779607010090282e-3
allele num: 7532
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 6.514657980456026e-3
allele num: 614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.444518e6

QD
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.64e-2

GenotypeQuality
all individuals: 2824
bin: 7.5e0
variant carriers: 64

GenotypeQuality
all individuals: 4441
bin: 3.25e1
variant carriers: 68

GenotypeQuality
all individuals: 474
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variant carriers: 7

GenotypeQuality
all individuals: 2332
bin: 1.25e1
variant carriers: 62

GenotypeQuality
all individuals: 712
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3492
bin: 3.75e1
variant carriers: 60

GenotypeQuality
all individuals: 1987
bin: 4.75e1
variant carriers: 39

GenotypeQuality
all individuals: 1689
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variant carriers: 13

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1389
bin: 5.25e1
variant carriers: 37

GenotypeQuality
all individuals: 11077
bin: 6.25e1
variant carriers: 18

Other
type: Population
allele count: 2
allele frequency: 3.257328990228013e-3
allele num: 614
num of homozygotes: 0

East Asian
type: Population
allele count: 34
allele frequency: 5.710446758481693e-3
allele num: 5954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.941344778254649e-4
allele num: 5592
num of homozygotes: 0

South Asian
type: Population
allele count: 62
allele frequency: 7.021517553793885e-3
allele num: 8830
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 3.469210754553339e-3
allele num: 6918
num of homozygotes: 0

Latino
type: Population
allele count: 40
allele frequency: 5.310674455655869e-3
allele num: 7532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 383
allele frequency: 8.613322538568793e-3
allele num: 44466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.64e-2

QD
type: SiteQuality
SIO_000300: 5.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

DP
type: SiteQuality
SIO_000300: 1.444518e6

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 993
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28467
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variant carriers: 0

GenotypeQuality
all individuals: 2599
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variant carriers: 1

GenotypeQuality
all individuals: 7201
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variant carriers: 0

GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1242
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variant carriers: 0

GenotypeQuality
all individuals: 3451
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variant carriers: 0

GenotypeQuality
all individuals: 1327
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4073
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.619118551860367e-5
allele num: 61762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

QD
type: SiteQuality
SIO_000300: 9.41e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.181e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.388e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 2.804e0

DP
type: SiteQuality
SIO_000300: 1.423966e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 374
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 1248
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variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5803
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 320
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 372
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4371
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variant carriers: 0

GenotypeQuality
all individuals: 726
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variant carriers: 0

GenotypeQuality
all individuals: 35333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593066972535525e-5
allele num: 62772
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.051303616484441e-4
allele num: 9512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14312
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.475623e6

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.162e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
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variant carriers: 0

GenotypeQuality
all individuals: 4411
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 612
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variant carriers: 0

GenotypeQuality
all individuals: 1259
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.067827348567283e-5
allele num: 11028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.49e-1

MQ
type: SiteQuality
SIO_000300: 6.017e1

QD
type: SiteQuality
SIO_000300: 1.84e1

VQSLOD
type: SiteQuality
SIO_000300: -8.955e-1

FS
type: SiteQuality
SIO_000300: 2.751e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.85e-1

DP
type: SiteQuality
SIO_000300: 1.480214e6

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4512
bin: 6.75e1
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GenotypeQuality
all individuals: 1202
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
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GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 38780
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variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.950236308034473e-5
allele num: 14388
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.744e0

FS
type: SiteQuality
SIO_000300: 4.963e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

DP
type: SiteQuality
SIO_000300: 1.5043e6

QD
type: SiteQuality
SIO_000300: 1.493e1

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

GenotypeQuality
all individuals: 1263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4072
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63962
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.727e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.535895e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.361e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556274900398406e-5
allele num: 64256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 4.409e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 1.549824e6

QD
type: SiteQuality
SIO_000300: 1.154e1

BaseQRankSum
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SIO_000300: 2.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.777e1

VQSLOD
type: SiteQuality
SIO_000300: -1.333e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14504
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.011443485243927e-4
allele num: 9962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.921e0

MQRankSum
type: SiteQuality
SIO_000300: -2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e0

DP
type: SiteQuality
SIO_000300: 1.552417e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.992808629644426e-4
allele num: 10012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.98421567257997e-5
allele num: 14318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64242
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

FS
type: SiteQuality
SIO_000300: 1.105e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 1.552832e6

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11054
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.185677021579322e-4
allele num: 8434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13416
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.516711e6

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.246e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584786053882726e-5
allele num: 63100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.079e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 1.508193e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598516576616899e-5
allele num: 62558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.19e-1

InbreedingCoeff
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BaseQRankSum
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FS
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62224
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele num: 12574
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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DP
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InbreedingCoeff
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SIO_000300: 1.0e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

Latino
type: Population
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allele frequency: 9.164222873900293e-5
allele num: 10912
num of homozygotes: 0

African
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 810
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.1e-3

ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.349e1

BaseQRankSum
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ClippingRankSum
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MQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 61022
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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allele num: 11872
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East Asian
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allele frequency: 0.0e0
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African
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.218323586744639e-4
allele num: 8208
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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South Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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MQ
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ClippingRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.04602510460251e-4
allele num: 9560
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South Asian
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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SIO_000300: 6.4e-2

ClippingRankSum
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DP
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SIO_000300: 1.375659e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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FS
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Other
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South Asian
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.382623381497467e-5
allele num: 10658
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59198
num of homozygotes: 0

East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

ReadPosRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58988
num of homozygotes: 0

East Asian
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6320
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.548490117455023e-5
allele num: 56362
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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QD
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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Other
type: Population
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African
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allele frequency: 1.102535832414554e-4
allele num: 9070
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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allele frequency: 2.625360987135731e-4
allele num: 7618
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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Other
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512813530604218e-5
allele num: 66102
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.715e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
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SIO_000300: 2.557059e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

MQRankSum
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SIO_000300: -3.04e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512172992590352e-5
allele num: 66130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.566714e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

FS
type: SiteQuality
SIO_000300: 2.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.62e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.941e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e0

VQSLOD
type: SiteQuality
SIO_000300: -1.286e0

DP
type: SiteQuality
SIO_000300: 2.57108e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510345869204048e-5
allele num: 66210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.36e0

VQSLOD
type: SiteQuality
SIO_000300: -2.784e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e0

DP
type: SiteQuality
SIO_000300: 2.572489e6

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.67e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

MQ
type: SiteQuality
SIO_000300: 5.9e1

DP
type: SiteQuality
SIO_000300: 2.573025e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.347e0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12968
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.827e0

DP
type: SiteQuality
SIO_000300: 2.575135e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 4.74e0

QD
type: SiteQuality
SIO_000300: 1.205e1

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213444970270598e-4
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.578998e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

FS
type: SiteQuality
SIO_000300: 4.832e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.938e0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.998e1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.013e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 2.579125e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.521e0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.57e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

DP
type: SiteQuality
SIO_000300: 2.579468e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13421
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 1.071e1

FS
type: SiteQuality
SIO_000300: 8.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.580666e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 1.258e1

DP
type: SiteQuality
SIO_000300: 2.581507e6

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

FS
type: SiteQuality
SIO_000300: 1.1198e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 2.582428e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.21e-1

GenotypeQuality
all individuals: 2469
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 47

GenotypeQuality
all individuals: 4184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.033612425676495e-4
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.119556706619286e-4
allele num: 66412
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.961364427427776e-4
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

DP
type: SiteQuality
SIO_000300: 2.585031e6

QD
type: SiteQuality
SIO_000300: 1.61e1

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 24762
bin: 9.75e1
variant carriers: 47

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4083
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4184
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.119248373885811e-4
allele num: 66416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.033612425676495e-4
allele num: 16482
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.962576153176675e-4
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

DP
type: SiteQuality
SIO_000300: 2.585116e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 1.605e1

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24731
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 5157
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variant carriers: 0

GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2462
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3639
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GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4085
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.408e1

MQRankSum
type: SiteQuality
SIO_000300: 6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.581363e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
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GenotypeQuality
all individuals: 5152
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214034235765449e-4
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.248e1

DP
type: SiteQuality
SIO_000300: 2.580727e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 24730
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.865e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 4.697e0

DP
type: SiteQuality
SIO_000300: 2.578031e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.093e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 2.25e1
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GenotypeQuality
all individuals: 2464
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 4079
bin: 8.25e1
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GenotypeQuality
all individuals: 24739
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 5132
bin: 6.75e1
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GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13037
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 2.085816448152563e-3
allele num: 10068
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 7.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

QD
type: SiteQuality
SIO_000300: 1.25e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.576581e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0