12-10762540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762540
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762540
    reference: chr 12
allele count: 1
allele frequency: 9.624824346955668e-6
allele num: 103898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+681G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154G>A
  hgvsp: ENSP00000319240.2:p.Ala52Thr
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16G>A
  hgvsp: ENSP00000439091.1:p.Ala6Thr
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154G>A
  hgvsp: ENSP00000437512.1:p.Ala52Thr
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16G>A
  hgvsp: ENSP00000437462.1:p.Ala6Thr
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247G>A
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala52Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

12-10762555-TAATAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762555
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762550
    reference: chr 12
allele count: 1
allele frequency: 1.04644105397543e-5
allele num: 95562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-20_*247-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-20_*72-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-20_*247-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-20_222-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-20_222-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-20_16-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-20_154-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-20_16-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+661_153+665delTTATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-20_154-16delTTATT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: TAATAA
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

12-10762565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762565
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762565
    reference: chr 12
allele count: 1
allele frequency: 1.110592834455032e-5
allele num: 90042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+656T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-25T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-25T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

12-10762574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762574
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762574
    reference: chr 12
allele count: 1
allele frequency: 1.20328255480952e-5
allele num: 83106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+647G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-34G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-34G>A
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

12-10762577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762577
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762577
    reference: chr 12
allele count: 1
allele frequency: 1.240787155371368e-5
allele num: 80594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-37G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+644G>A
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-10762578-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762578
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762578
    reference: chr 12
allele count: 1
allele frequency: 1.242482977983202e-5
allele num: 80484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+643G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-38G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-38G>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

12-10762580-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762580
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762580
    reference: chr 12
allele count: 1
allele frequency: 1.24595066035385e-5
allele num: 80260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+641T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-40T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-40T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

12-10762582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762582
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762582
    reference: chr 12
allele count: 1
allele frequency: 1.26864914239318e-5
allele num: 78824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+639C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-42C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-42C>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8930
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

12-10762583-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762583
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762583
    reference: chr 12
allele count: 25
allele frequency: 3.196522183863956e-4
allele num: 78210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+638A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-43A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-43A>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17928
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8894
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22609
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7897
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6242
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-10762591-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762591
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762591
    reference: chr 12
allele count: 1
allele frequency: 1.371930305940458e-5
allele num: 72890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+630G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-51G>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-51G>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21211
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

12-10762591-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10762591
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10762591
    reference: chr 12
allele count: 3
allele frequency: 4.115790917821375e-5
allele num: 72890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.16-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*247-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*247-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.222-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.16-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.154-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+630G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*72-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.222-51G>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.154-51G>A
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21211
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

12-10763174-TGCAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763169
    reference: chr 12
allele count: 4
allele frequency: 8.874689385871494e-5
allele num: 45072
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7769
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 454
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 2.620545073375262e-4
  allele num: 3816
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2086
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 9.076881183625306e-5
  allele num: 22034
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
reference allele: TGCAAA
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

12-10763174-TGCAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763168
    reference: chr 12
allele count: 87
allele frequency: 1.93024494142705e-3
allele num: 45072
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 5.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 2.5e0
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 7769
  bin: 7.5e0
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 8
num of homozygotes: 2
population: European (Finnish)
  type: Population
  allele count: 4
  allele frequency: 1.306335728282169e-3
  allele num: 3062
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 8
  allele frequency: 3.835091083413231e-3
  allele num: 2086
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 8
  allele frequency: 2.09643605870021e-3
  allele num: 3816
  num of homozygotes: 0
population: African
  type: Population
  allele count: 3
  allele frequency: 5.110732538330494e-4
  allele num: 5870
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: TGCAAAA
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-10763174-TGCAAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763167
    reference: chr 12
allele count: 1114
allele frequency: 2.471600993965211e-2
allele num: 45072
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 859
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 840
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 429
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 6.25e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 215
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 305
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 3.75e1
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 5.25e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 2.25e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 7769
  bin: 7.5e0
  variant carriers: 369
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.75e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 2.5e0
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.75e1
  variant carriers: 534
num of homozygotes: 31
population: African
  type: Population
  allele count: 57
  allele frequency: 9.710391822827938e-3
  allele num: 5870
  num of homozygotes: 1
population: Other
  type: Population
  allele count: 11
  allele frequency: 2.422907488986784e-2
  allele num: 454
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 567
  allele frequency: 2.573295815557774e-2
  allele num: 22034
  num of homozygotes: 9
population: Latino
  type: Population
  allele count: 90
  allele frequency: 2.358490566037736e-2
  allele num: 3816
  num of homozygotes: 4
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: TGCAAAAA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

12-10763174-TGCAAAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763166
    reference: chr 12
allele count: 910
allele frequency: 2.018991835285765e-2
allele num: 45072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 499
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 1130
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 102
num of homozygotes: 4
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: TGCAAAAAA
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

12-10763174-TGCAAAAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763165
    reference: chr 12
allele count: 397
allele frequency: 8.808129215477458e-3
allele num: 45072
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 519
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 7769
  bin: 7.5e0
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 2.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 3.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 5.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 2.5e0
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.75e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 6.25e1
  variant carriers: 43
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 65
  allele frequency: 3.11601150527325e-2
  allele num: 2086
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 139
  allele frequency: 6.308432422619588e-3
  allele num: 22034
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 6
  allele frequency: 1.3215859030837e-2
  allele num: 454
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 63
  allele frequency: 8.129032258064516e-3
  allele num: 7750
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
reference allele: TGCAAAAAAA
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

12-10763174-TGCAAAAAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763164
    reference: chr 12
allele count: 92
allele frequency: 2.041178558750444e-3
allele num: 45072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19920
  bin: 7.5e0
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 2.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 2.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 1.25e1
  variant carriers: 30
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: TGCAAAAAAAA
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

12-10763175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763175
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763175
    reference: chr 12
allele count: 12449
allele frequency: 2.600584917484855e-1
allele num: 47870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+46C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+46C>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 1.75e1
  variant carriers: 1931
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 2.75e1
  variant carriers: 716
genotype depth: GenotypeDepth
  all individuals: 12115
  bin: 1.25e1
  variant carriers: 5813
genotype depth: GenotypeDepth
  all individuals: 20276
  bin: 7.5e0
  variant carriers: 9570
genotype depth: GenotypeDepth
  all individuals: 8923
  bin: 2.5e0
  variant carriers: 2906
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 602
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.25e1
  variant carriers: 932
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 248
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 2.75e1
  variant carriers: 964
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 7.75e1
  variant carriers: 657
num of homozygotes: 1757
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763176-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763177
    reference: chr 12
allele count: 4
allele frequency: 1.13051834266011e-4
allele num: 35382
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+44dupT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+44dupT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 1
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/12-10763176-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763178
    reference: chr 12
allele count: 3
allele frequency: 8.478887569950823e-5
allele num: 35382
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+43_221+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+43_15+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+43_153+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+43_*246+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+43_15+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+43_153+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+43_153+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+43_*246+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+43_221+44dupTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+43_*71+44dupTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763176-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763174
    reference: chr 12
allele count: 9
allele frequency: 2.543666270985246e-4
allele num: 35382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+43_153+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+43_221+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+43_*71+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+43_*246+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+43_153+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+43_15+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+43_153+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+43_221+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+43_15+44delTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+43_*246+44delTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: CAA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763176-C-CAAAAAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763183
    reference: chr 12
allele count: 4
allele frequency: 1.13051834266011e-4
allele num: 35382
alternate allele: CAAAAAAA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+38_*246+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+38_15+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+38_153+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+38_15+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+38_221+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+38_*246+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+38_153+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+38_153+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+38_*71+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+38_221+44dupTTTTTTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/12-10763176-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763173
    reference: chr 12
allele count: 15
allele frequency: 4.239443784975411e-4
allele num: 35382
alternate allele: C
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5645
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 4
  allele frequency: 9.546539379474941e-4
  allele num: 4190
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 292
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 2.893518518518518e-4
  allele num: 3456
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6972
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: CAAA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/12-10763176-CAAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763176
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763172
    reference: chr 12
allele count: 10
allele frequency: 2.826295856650274e-4
allele num: 35382
alternate allele: C
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5645
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 5
  allele frequency: 3.01313727853441e-4
  allele num: 16594
  num of homozygotes: 0
population: African
  type: Population
  allele count: 5
  allele frequency: 1.193317422434368e-3
  allele num: 4190
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3456
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 292
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: CAAAA
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/12-10763180-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763180
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763180
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 7454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+41T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+41T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763181-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763181
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763181
    reference: chr 12
allele count: 3
allele frequency: 3.58337314859054e-4
allele num: 8372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+40T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+40T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/12-10763182-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763182
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763182
    reference: chr 12
allele count: 80
allele frequency: 8.32639467110741e-3
allele num: 9608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+39T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+39T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 1.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 7.5e0
  variant carriers: 73
num of homozygotes: 2
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/12-10763183-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763183
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763183
    reference: chr 12
allele count: 1077
allele frequency: 8.532720646490255e-2
allele num: 12622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+38T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+38T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 2.5e0
  variant carriers: 823
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 7.5e0
  variant carriers: 869
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 1.25e1
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 1.75e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 5859
  bin: 2.5e0
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.75e1
  variant carriers: 53
num of homozygotes: 30
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

12-10763184-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763184
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763185
    reference: chr 12
allele count: 1
allele frequency: 7.150007150007151e-5
allele num: 13986
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+36_*246+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+36_153+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+36_15+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+36_221+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+36_221+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+36_153+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+36_*71+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+36_153+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+36_*246+37insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+36_15+37insC
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/12-10763184-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763184
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763184
    reference: chr 12
allele count: 919
allele frequency: 6.57085657085657e-2
allele num: 13986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+37T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+37T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 7.5e0
  variant carriers: 1141
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 1.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 1.25e1
  variant carriers: 516
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 463
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 2.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 1.75e1
  variant carriers: 143
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 121
num of homozygotes: 4
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

12-10763184-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763184
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763184
    reference: chr 12
allele count: 1
allele frequency: 7.150007150007151e-5
allele num: 13986
alternate allele: G
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7013
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.670564650851988e-4
  allele num: 5986
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 504
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5064
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 512
  num of homozygotes: 0
population: East Asian
population: African
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763185-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763185
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763185
    reference: chr 12
allele count: 430
allele frequency: 2.894843139894978e-2
allele num: 14854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+36T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+36T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 2.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 1.75e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 7.5e0
  variant carriers: 507
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 1.25e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 1.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.25e1
  variant carriers: 45
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/12-10763186-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763186
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763186
    reference: chr 12
allele count: 94
allele frequency: 6.139777922926192e-3
allele num: 15310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+35T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+35T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 1.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 7.5e0
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 1.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 6.25e1
  variant carriers: 9
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/12-10763187-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763187
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763187
    reference: chr 12
allele count: 42
allele frequency: 2.590993214065392e-3
allele num: 16210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+34T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+34T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 1.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 7.5e0
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4514
  bin: 2.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.25e1
  variant carriers: 4
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-10763188-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
allele count: 12
allele frequency: 6.973500697350069e-4
allele num: 17208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+33T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+33T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8711
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.75e1
  variant carriers: 7
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

12-10763188-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
allele count: 14
allele frequency: 8.135750813575082e-4
allele num: 17208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+33T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+33T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8711
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

12-10763188-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763188
    reference: chr 12
allele count: 2
allele frequency: 1.162250116225012e-4
allele num: 17208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+33T>A
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+33T>A
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

12-10763191-AAAAAAAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763191
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763181
    reference: chr 12
allele count: 2
allele frequency: 9.303190994511117e-5
allele num: 21498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: AAAAAAAAAAG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

12-10763192-AAAAAAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763192
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763183
    reference: chr 12
allele count: 4
allele frequency: 1.738374619730552e-4
allele num: 23010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14061
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8247
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AAAAAAAAAG
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

12-10763193-AAAAAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763193
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763185
    reference: chr 12
allele count: 13
allele frequency: 5.239822652156388e-4
allele num: 24810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6877
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15297
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31549
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: AAAAAAAAG
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

12-10763194-AAAAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763194
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763187
    reference: chr 12
allele count: 16
allele frequency: 5.997001499250374e-4
allele num: 26680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20_153+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20_15+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20_*246+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20_*71+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20_*246+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20_221+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20_153+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20_221+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20_15+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20_153+26delCTTTTTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16456
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7918
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: AAAAAAAG
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

12-10763195-AAAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763195
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763189
    reference: chr 12
allele count: 5
allele frequency: 1.698138839831545e-4
allele num: 29444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20_*246+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20_*71+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20_221+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20_221+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20_15+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20_153+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20_153+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20_15+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20_153+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20_*246+25delCTTTTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17416
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: AAAAAAG
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

12-10763196-AAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763191
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 32582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20_*71+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20_15+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20_221+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20_15+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20_221+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20_153+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20_153+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20_*246+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20_153+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20_*246+24delCTTTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18271
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: AAAAAG
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

12-10763198-A-AAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763198
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763201
    reference: chr 12
allele count: 1
allele frequency: 2.581044806937848e-5
allele num: 38744
alternate allele: AAAG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20_221+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20_*71+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20_153+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20_15+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20_*246+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20_221+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20_153+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20_15+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20_*246+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20_153+22dupCTT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/12-10763198-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763198
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763198
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 38744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+23T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+23T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

12-10763199-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763199
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763199
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 41068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+22T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+22T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21252
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-10763200-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763200
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763201
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 40332
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20dupC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20dupC
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12840
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

12-10763200-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763200
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763199
    reference: chr 12
allele count: 1
allele frequency: 2.479420807299415e-5
allele num: 40332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20delC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20delC
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: AG
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-10763201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763201
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763201
    reference: chr 12
allele count: 37
allele frequency: 1.720450106946898e-3
allele num: 21506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+20C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+20C>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13002
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/12-10763203-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763203
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763203
    reference: chr 12
allele count: 37
allele frequency: 9.133998222573318e-4
allele num: 40508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+18G>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+18G>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25069
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-10763203-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763203
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763201
    reference: chr 12
allele count: 1
allele frequency: 2.468648168263059e-5
allele num: 40508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+16_221+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+16_153+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+16_153+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+16_15+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+16_*246+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+16_*246+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+16_153+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+16_*71+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+16_15+17delAT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+16_221+17delAT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25069
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: CAT
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

12-10763205-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763205
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763205
    reference: chr 12
allele count: 19881
allele frequency: 3.487405276452428e-1
allele num: 57008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+16A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+16A>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 22280
  bin: 7.5e0
  variant carriers: 8522
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.25e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 13902
  bin: 1.25e1
  variant carriers: 7908
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 1.75e1
  variant carriers: 3355
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 2.75e1
  variant carriers: 849
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 2.5e0
  variant carriers: 1051
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.25e1
  variant carriers: 1470
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 9.75e1
  variant carriers: 606
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 331
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 408
num of homozygotes: 4155
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

12-10763211-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763211
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763211
    reference: chr 12
allele count: 1
allele frequency: 1.519387383007172e-5
allele num: 65816
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+10A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+10A>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23678
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

12-10763213-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763213
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763213
    reference: chr 12
allele count: 21
allele frequency: 3.118503118503119e-4
allele num: 67340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+8C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+8C>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12803
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23577
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.153+8C>G
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/12-10763219-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763219
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763219
    reference: chr 12
allele count: 1
allele frequency: 1.3456776832813e-5
allele num: 74312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.153+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.221+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.221+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*246+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*71+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.153+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.153+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.15+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*246+2T>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.15+2T>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
hgvs: c.153+2T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

12-10763236-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763236
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763236
    reference: chr 12
allele count: 1
allele frequency: 8.538251366120219e-6
allele num: 117120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*56C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.206C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.138C>T
  hgvsp: ENST00000544850.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.138C>T
  hgvsp: ENST00000381881.2:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*231C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.206C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*231C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.138C>T
  hgvsp: ENST00000320756.2:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val46Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-10763236-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763236
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763236
    reference: chr 12
allele count: 92489
allele frequency: 7.896943306010928e-1
allele num: 117120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.206C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-1C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.138C>G
  hgvsp: ENST00000381881.2:c.138C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*231C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*231C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.206C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.138C>G
  hgvsp: ENST00000320756.2:c.138C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.138C>G
  hgvsp: ENST00000544850.1:c.138C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-1C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*56C>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 332
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 1157
genotype depth: GenotypeDepth
  all individuals: 11734
  bin: 2.25e1
  variant carriers: 9704
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 3.75e1
  variant carriers: 4365
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 7.5e0
  variant carriers: 1154
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 626
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 1.25e1
  variant carriers: 4390
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 783
genotype depth: GenotypeDepth
  all individuals: 8417
  bin: 1.75e1
  variant carriers: 8359
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.25e1
  variant carriers: 6313
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 2.75e1
  variant carriers: 8624
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 4.75e1
  variant carriers: 1953
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 889
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 5.25e1
  variant carriers: 1414
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 377
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.25e1
  variant carriers: 2799
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 9.75e1
  variant carriers: 3006
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 1770
hgvs: p.Val46Val
num of homozygotes: 37117
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-10763242-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763242
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763242
    reference: chr 12
allele count: 1
allele frequency: 8.568099252861745e-6
allele num: 116712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*225T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.132T>C
  hgvsp: ENST00000381881.2:c.132T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.132T>C
  hgvsp: ENST00000320756.2:c.132T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*50T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.200T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*225T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.200T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.132T>C
  hgvsp: ENST00000544850.1:c.132T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5035
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn44Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

12-10763257-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763257
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763257
    reference: chr 12
allele count: 2
allele frequency: 1.708408788054806e-5
allele num: 117068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.117C>T
  hgvsp: ENST00000544850.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-22C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-22C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.117C>T
  hgvsp: ENST00000381881.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.185C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.185C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.117C>T
  hgvsp: ENST00000320756.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn39Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-10763261-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763261
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763261
    reference: chr 12
allele count: 1
allele frequency: 8.548323673727582e-6
allele num: 116982
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.113A>G
  hgvsp: ENSP00000319240.2:p.Asn38Ser
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.113A>G
  hgvsp: ENSP00000371305.2:p.Asn38Ser
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*31A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.113A>G
  hgvsp: ENSP00000437512.1:p.Asn38Ser
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.181A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.181A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*206A>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*206A>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19053
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn38Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-10763266-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763266
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763266
    reference: chr 12
allele count: 1
allele frequency: 8.567511994516792e-6
allele num: 116720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*201T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*201T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.108T>C
  hgvsp: ENST00000320756.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.108T>C
  hgvsp: ENST00000381881.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.108T>C
  hgvsp: ENST00000544850.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.176T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-31T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.176T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-31T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*26T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr36Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

12-10763284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763284
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763284
    reference: chr 12
allele count: 4
allele frequency: 3.480258235161049e-5
allele num: 114934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-5C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-5C>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18706
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.95-5C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-10763286-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763286
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763286
    reference: chr 12
allele count: 1
allele frequency: 8.713230168688136e-6
allele num: 114768
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-7C>G
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-7C>G
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.95-7C>G
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

12-10763288-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763288
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763288
    reference: chr 12
allele count: 1
allele frequency: 8.727678961057096e-6
allele num: 114578
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-9T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-9T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

12-10763291-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763291
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763291
    reference: chr 12
allele count: 1
allele frequency: 8.747528823107472e-6
allele num: 114318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-12C>T
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-12C>T
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-10763296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763296
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763296
    reference: chr 12
allele count: 1
allele frequency: 8.77470078270331e-6
allele num: 113964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-17T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-17T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

12-10763298-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763298
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763298
    reference: chr 12
allele count: 1
allele frequency: 8.789045333895832e-6
allele num: 113778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-19T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-19T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9516
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4970
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

12-10763301-CAATT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763301
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763297
    reference: chr 12
allele count: 1
allele frequency: 8.824411852950001e-6
allele num: 113322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-26_-44-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-26_95-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-26_-44-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-26_163-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-26_163-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-26_*13-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-26_95-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-26_*188-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-26_95-23delAATT
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-26_*188-23delAATT
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: CAATT
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-10763303-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763303
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763303
    reference: chr 12
allele count: 3
allele frequency: 2.647884340412011e-5
allele num: 113298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-24T>C
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-24T>C
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8781
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

12-10763309-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10763309
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 10763310
    reference: chr 12
allele count: 1
allele frequency: 8.872642095363157e-6
allele num: 112706
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000371305
  ensembl transcript: ENST00000381881
  gene symbol: MAGOHB
  hgvsc: ENST00000381881.2:c.95-31_95-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439091
  ensembl transcript: ENST00000540074
  gene symbol: MAGOHB
  hgvsc: ENST00000540074.1:c.-44-31_-44-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437548
  ensembl transcript: ENST00000546173
  gene symbol: MAGOHB
  hgvsc: ENST00000546173.1:c.*13-31_*13-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437512
  ensembl transcript: ENST00000544850
  gene symbol: MAGOHB
  hgvsc: ENST00000544850.1:c.95-31_95-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000442440
  ensembl transcript: ENST00000543929
  gene symbol: MAGOHB
  hgvsc: ENST00000543929.1:c.*188-31_*188-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000544176
  gene symbol: MAGOHB
  hgvsc: ENST00000544176.1:n.163-31_163-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl transcript: ENST00000537852
  gene symbol: MAGOHB
  hgvsc: ENST00000537852.1:n.163-31_163-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000319240
  ensembl transcript: ENST00000320756
  gene symbol: MAGOHB
  hgvsc: ENST00000320756.2:c.95-31_95-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000439698
  ensembl transcript: ENST00000545236
  gene symbol: MAGOHB
  hgvsc: ENST00000545236.1:c.*188-31_*188-30insC
  variant of: http://identifiers.org/hgnc/25504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111196
  ensembl protein: ENSP00000437462
  ensembl transcript: ENST00000539554
  gene symbol: MAGOHB
  hgvsc: ENST00000539554.1:c.-44-31_-44-30insC
  variant of: http://identifiers.org/hgnc/25504
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 306
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16668
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29407
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.760191508836161e-5
allele num: 56812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6140
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

FS
type: SiteQuality
SIO_000300: 2.318e0

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.228699e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.041e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.725e0

GenotypeQuality
all individuals: 392
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5558
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6714
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.361204013377926e-5
allele num: 11960
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.409e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 1.047896e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 1.084e1

MQ
type: SiteQuality
SIO_000300: 4.995e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 3.053e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.257545271629779e-4
allele num: 7952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49182
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.444e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

FS
type: SiteQuality
SIO_000300: 7.225e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.62506e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.201188641866608e-5
allele num: 45430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.49e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e0

DP
type: SiteQuality
SIO_000300: 9.04785e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.274277916761428e-5
allele num: 43970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.288e0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.746e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.91485e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.278319511528297e-5
allele num: 43892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.794e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.90554e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.231e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.257e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.067919692439129e-4
allele num: 9364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43728
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7238
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.4e0

FS
type: SiteQuality
SIO_000300: 8.045e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.179e0

DP
type: SiteQuality
SIO_000300: 8.86484e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.608e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5448
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9170
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.238236750866766e-4
allele num: 8076
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 5.402358246817306e-4
allele num: 42574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.2453300124533e-4
allele num: 8030
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.851166234727879e-4
allele num: 5402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5392
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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DP
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

Other
type: Population
allele count: 0
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African
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.518130539887188e-5
allele num: 39712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.027e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

FS
type: SiteQuality
SIO_000300: 1.545e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.69555e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6046
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4199
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7544
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15782
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7841
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 196
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 950
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 4.465614766299494e-4
allele num: 6718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.109e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 8.69555e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 1.545e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.027e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.265839320705421e-4
allele num: 3062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7750
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

DP
type: SiteQuality
SIO_000300: 9.44528e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

MQ
type: SiteQuality
SIO_000300: 5.072e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

South Asian
type: Population
allele count: 15
allele frequency: 1.935483870967742e-3
allele num: 7750
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 2.178451484070074e-3
allele num: 22034
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.202643171806168e-3
allele num: 454
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQ
type: SiteQuality
SIO_000300: 5.072e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 9.44528e5

European (Finnish)
type: Population
allele count: 94
allele frequency: 3.069888961463096e-2
allele num: 3062
num of homozygotes: 4

East Asian
type: Population
allele count: 130
allele frequency: 6.2320230105465e-2
allele num: 2086
num of homozygotes: 7

South Asian
type: Population
allele count: 165
allele frequency: 2.129032258064516e-2
allele num: 7750
num of homozygotes: 6

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

DP
type: SiteQuality
SIO_000300: 9.44528e5

MQ
type: SiteQuality
SIO_000300: 5.072e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 483
bin: 5.75e1
variant carriers: 85

GenotypeQuality
all individuals: 9631
bin: 2.25e1
variant carriers: 132

GenotypeQuality
all individuals: 1391
bin: 4.75e1
variant carriers: 125

GenotypeQuality
all individuals: 4526
bin: 3.25e1
variant carriers: 173

GenotypeQuality
all individuals: 493
bin: 8.25e1
variant carriers: 58

GenotypeQuality
all individuals: 1306
bin: 4.25e1
variant carriers: 115

GenotypeQuality
all individuals: 7447
bin: 2.5e0
variant carriers: 119

GenotypeQuality
all individuals: 850
bin: 5.25e1
variant carriers: 111

GenotypeQuality
all individuals: 3630
bin: 2.75e1
variant carriers: 162

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 109

GenotypeQuality
all individuals: 3133
bin: 9.75e1
variant carriers: 429

GenotypeQuality
all individuals: 2944
bin: 3.75e1
variant carriers: 187

GenotypeQuality
all individuals: 7769
bin: 7.5e0
variant carriers: 177

GenotypeQuality
all individuals: 1442
bin: 6.25e1
variant carriers: 118

GenotypeQuality
all individuals: 387
bin: 9.25e1
variant carriers: 39

Latino
type: Population
allele count: 120
allele frequency: 3.144654088050314e-2
allele num: 3816
num of homozygotes: 1

African
type: Population
allele count: 37
allele frequency: 6.303236797274276e-3
allele num: 5870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 84
allele frequency: 2.743305029392554e-2
allele num: 3062
num of homozygotes: 0

Other
type: Population
allele count: 14
allele frequency: 3.083700440528634e-2
allele num: 454
num of homozygotes: 0

East Asian
type: Population
allele count: 123
allele frequency: 5.896452540747843e-2
allele num: 2086
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 412
allele frequency: 1.869837523826813e-2
allele num: 22034
num of homozygotes: 1

South Asian
type: Population
allele count: 120
allele frequency: 1.548387096774194e-2
allele num: 7750
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.072e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

DP
type: SiteQuality
SIO_000300: 9.44528e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

Latino
type: Population
allele count: 87
allele frequency: 2.279874213836478e-2
allele num: 3816
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.873935264054515e-3
allele num: 5870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 8.491182233834096e-3
allele num: 3062
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 2.05e0

DP
type: SiteQuality
SIO_000300: 9.44528e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

MQ
type: SiteQuality
SIO_000300: 5.072e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 12

GenotypeQuality
all individuals: 3630
bin: 2.75e1
variant carriers: 37

GenotypeQuality
all individuals: 961
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 9631
bin: 2.25e1
variant carriers: 32

GenotypeQuality
all individuals: 4526
bin: 3.25e1
variant carriers: 31

GenotypeQuality
all individuals: 7769
bin: 7.5e0
variant carriers: 16

GenotypeQuality
all individuals: 2944
bin: 3.75e1
variant carriers: 20

GenotypeQuality
all individuals: 1306
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 493
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 850
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 387
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 646
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 364
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 483
bin: 5.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1442
bin: 6.25e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.959503592423253e-3
allele num: 3062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 1.225378959789416e-3
allele num: 22034
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.419354838709678e-3
allele num: 7750
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.202643171806168e-3
allele num: 454
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 7.670182166826462e-3
allele num: 2086
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 7.861635220125786e-3
allele num: 3816
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.703577512776831e-4
allele num: 5870
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.021e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

DP
type: SiteQuality
SIO_000300: 9.44528e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.072e1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

GenotypeQuality
all individuals: 1205
bin: 4.25e1
variant carriers: 529

GenotypeQuality
all individuals: 7046
bin: 2.25e1
variant carriers: 1394

GenotypeQuality
all individuals: 1462
bin: 6.25e1
variant carriers: 590

GenotypeQuality
all individuals: 3945
bin: 1.75e1
variant carriers: 1283

GenotypeQuality
all individuals: 1016
bin: 8.25e1
variant carriers: 752

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 537

GenotypeQuality
all individuals: 912
bin: 7.25e1
variant carriers: 543

GenotypeQuality
all individuals: 2407
bin: 3.75e1
variant carriers: 792

GenotypeQuality
all individuals: 3399
bin: 1.25e1
variant carriers: 841

GenotypeQuality
all individuals: 4901
bin: 2.5e0
variant carriers: 366

GenotypeQuality
all individuals: 5612
bin: 7.5e0
variant carriers: 944

GenotypeQuality
all individuals: 867
bin: 5.75e1
variant carriers: 681

GenotypeQuality
all individuals: 3505
bin: 3.25e1
variant carriers: 1039

GenotypeQuality
all individuals: 1149
bin: 5.25e1
variant carriers: 766

GenotypeQuality
all individuals: 1024
bin: 6.75e1
variant carriers: 502

GenotypeQuality
all individuals: 10712
bin: 9.75e1
variant carriers: 8996

GenotypeQuality
all individuals: 874
bin: 8.75e1
variant carriers: 647

GenotypeQuality
all individuals: 1473
bin: 4.75e1
variant carriers: 770

South Asian
type: Population
allele count: 3049
allele frequency: 3.212178676780447e-1
allele num: 9492
num of homozygotes: 436

Latino
type: Population
allele count: 1853
allele frequency: 4.331463300607761e-1
allele num: 4278
num of homozygotes: 347

European (Non-Finnish)
type: Population
allele count: 4419
allele frequency: 1.960514640638864e-1
allele num: 22540
num of homozygotes: 332

East Asian
type: Population
allele count: 1607
allele frequency: 6.752100840336135e-1
allele num: 2380
num of homozygotes: 527

Other
type: Population
allele count: 92
allele frequency: 1.982758620689655e-1
allele num: 464
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 632
allele frequency: 2.167352537722908e-1
allele num: 2916
num of homozygotes: 71

African
type: Population
allele count: 797
allele frequency: 1.374137931034483e-1
allele num: 5800
num of homozygotes: 38

DP
type: SiteQuality
SIO_000300: 8.67475e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.91e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

MQ
type: SiteQuality
SIO_000300: 5.395e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

GenotypeQuality
all individuals: 5645
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5297
bin: 2.5e0
variant carriers: 11

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1006
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 793
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1214
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2794
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 1.25e1
variant carriers: 15

GenotypeQuality
all individuals: 7320
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 4.77326968973747e-4
allele num: 4190
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.205254911413764e-4
allele num: 16594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3456
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

QD
type: SiteQuality
SIO_000300: 1.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

DP
type: SiteQuality
SIO_000300: 8.13272e5

MQ
type: SiteQuality
SIO_000300: 5.015e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 5297
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 7320
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5645
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.205254911413764e-4
allele num: 16594
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.386634844868735e-4
allele num: 4190
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 8.13272e5

MQ
type: SiteQuality
SIO_000300: 5.015e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.25e1
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GenotypeQuality
all individuals: 5645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5297
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3583
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7320
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2485
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 793
bin: 6.25e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.070993914807302e-4
allele num: 1972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 9.546539379474941e-4
allele num: 4190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.410509822827528e-4
allele num: 16594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

QD
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 8.13272e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.015e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5297
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6313
bin: 7.5e0
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GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 793
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 7.159904534606205e-4
allele num: 4190
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 1.434308663224326e-4
allele num: 6972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.015e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 8.13272e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.73e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 5.423647101361938e-4
allele num: 16594
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.246589716684155e-4
allele num: 1906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

DP
type: SiteQuality
SIO_000300: 8.13272e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.015e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.838e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.203e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

DP
type: SiteQuality
SIO_000300: 8.13272e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.015e1

GenotypeQuality
all individuals: 337
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
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GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 3370
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variant carriers: 3

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.369e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.119e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 8.13331e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.275e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

GenotypeQuality
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4355
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 295
bin: 1.25e1
variant carriers: 12

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3780
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 461
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.666666666666667e-3
allele num: 150
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.935995302407516e-4
allele num: 3406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.164e-1

MQ
type: SiteQuality
SIO_000300: 5.041e1

FS
type: SiteQuality
SIO_000300: 7.224e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

QD
type: SiteQuality
SIO_000300: 5.34e0

DP
type: SiteQuality
SIO_000300: 8.19546e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 112
bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 485
bin: 2.75e1
variant carriers: 23

GenotypeQuality
all individuals: 63
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 13

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 210
bin: 1.75e1
variant carriers: 39

GenotypeQuality
all individuals: 216
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 370
bin: 1.25e1
variant carriers: 65

GenotypeQuality
all individuals: 5600
bin: 2.5e0
variant carriers: 28

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 69
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2842
bin: 2.25e1
variant carriers: 23

GenotypeQuality
all individuals: 508
bin: 6.25e1
variant carriers: 9

GenotypeQuality
all individuals: 380
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 40
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 1.062753036437247e-2
allele num: 3952
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 8.928571428571429e-2
allele num: 112
num of homozygotes: 1

South Asian
type: Population
allele count: 14
allele frequency: 3.409644422795908e-3
allele num: 4106
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.225806451612903e-3
allele num: 930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 1.923076923076923e-2
allele num: 208
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 3.932584269662921e-2
allele num: 178
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 8.66809e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 7.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.015e1

FS
type: SiteQuality
SIO_000300: 3.814e0

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 116

GenotypeQuality
all individuals: 600
bin: 9.75e1
variant carriers: 530

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 98

GenotypeQuality
all individuals: 356
bin: 1.75e1
variant carriers: 196

GenotypeQuality
all individuals: 604
bin: 1.25e1
variant carriers: 297

GenotypeQuality
all individuals: 305
bin: 6.75e1
variant carriers: 74

GenotypeQuality
all individuals: 607
bin: 2.75e1
variant carriers: 137

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 96

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 82

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 40

GenotypeQuality
all individuals: 3244
bin: 2.25e1
variant carriers: 184

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 111

GenotypeQuality
all individuals: 462
bin: 3.25e1
variant carriers: 104

GenotypeQuality
all individuals: 718
bin: 6.25e1
variant carriers: 93

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 52

GenotypeQuality
all individuals: 113
bin: 8.25e1
variant carriers: 60

GenotypeQuality
all individuals: 5606
bin: 7.5e0
variant carriers: 364

GenotypeQuality
all individuals: 133
bin: 7.25e1
variant carriers: 59

European (Non-Finnish)
type: Population
allele count: 511
allele frequency: 9.424566580597565e-2
allele num: 5422
num of homozygotes: 8

Latino
type: Population
allele count: 96
allele frequency: 2.448979591836735e-1
allele num: 392
num of homozygotes: 4

East Asian
type: Population
allele count: 151
allele frequency: 3.973684210526316e-1
allele num: 380
num of homozygotes: 7

African
type: Population
allele count: 51
allele frequency: 4.561717352415027e-2
allele num: 1118
num of homozygotes: 1

South Asian
type: Population
allele count: 165
allele frequency: 3.513628620102215e-2
allele num: 4696
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 93
allele frequency: 2.021739130434783e-1
allele num: 460
num of homozygotes: 4

Other
type: Population
allele count: 10
allele frequency: 6.493506493506493e-2
allele num: 154
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.22268e5

MQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

MQ
type: SiteQuality
SIO_000300: 5.015e1

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.261e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 9.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.47e-2

QD
type: SiteQuality
SIO_000300: 7.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7013
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 8.064516129032258e-4
allele num: 1240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.68102e5

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-1

MQ
type: SiteQuality
SIO_000300: 4.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.412e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.165e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

QD
type: SiteQuality
SIO_000300: 4.9e0

GenotypeQuality
all individuals: 312
bin: 3.75e1
variant carriers: 186

GenotypeQuality
all individuals: 3534
bin: 2.25e1
variant carriers: 136

GenotypeQuality
all individuals: 894
bin: 6.25e1
variant carriers: 120

GenotypeQuality
all individuals: 585
bin: 3.25e1
variant carriers: 169

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 39

GenotypeQuality
all individuals: 195
bin: 7.75e1
variant carriers: 109

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 47

GenotypeQuality
all individuals: 368
bin: 6.75e1
variant carriers: 104

GenotypeQuality
all individuals: 120
bin: 8.25e1
variant carriers: 57

GenotypeQuality
all individuals: 607
bin: 1.25e1
variant carriers: 206

GenotypeQuality
all individuals: 6274
bin: 2.5e0
variant carriers: 109

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 84

GenotypeQuality
all individuals: 559
bin: 9.75e1
variant carriers: 408

GenotypeQuality
all individuals: 7013
bin: 7.5e0
variant carriers: 169

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 124

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 119

GenotypeQuality
all individuals: 181
bin: 7.25e1
variant carriers: 107

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 150

South Asian
type: Population
allele count: 126
allele frequency: 2.488151658767773e-2
allele num: 5064
num of homozygotes: 0

African
type: Population
allele count: 36
allele frequency: 2.903225806451613e-2
allele num: 1240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 395
allele frequency: 6.598730370865352e-2
allele num: 5986
num of homozygotes: 1

East Asian
type: Population
allele count: 145
allele frequency: 2.843137254901961e-1
allele num: 510
num of homozygotes: 2

Other
type: Population
allele count: 12
allele frequency: 7.058823529411765e-2
allele num: 170
num of homozygotes: 0

Latino
type: Population
allele count: 125
allele frequency: 2.48015873015873e-1
allele num: 504
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 80
allele frequency: 1.5625e-1
allele num: 512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

FS
type: SiteQuality
SIO_000300: 2.412e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.165e-1

DP
type: SiteQuality
SIO_000300: 9.68102e5

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-1

QD
type: SiteQuality
SIO_000300: 4.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.472e0

MQ
type: SiteQuality
SIO_000300: 4.953e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.412e0

QD
type: SiteQuality
SIO_000300: 4.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.472e0

MQ
type: SiteQuality
SIO_000300: 4.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.165e-1

DP
type: SiteQuality
SIO_000300: 9.68102e5

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 625
bin: 2.75e1
variant carriers: 72

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 68

GenotypeQuality
all individuals: 547
bin: 3.25e1
variant carriers: 105

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 9869
bin: 7.5e0
variant carriers: 69

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 24

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 42

GenotypeQuality
all individuals: 5680
bin: 2.5e0
variant carriers: 48

GenotypeQuality
all individuals: 981
bin: 6.25e1
variant carriers: 45

GenotypeQuality
all individuals: 372
bin: 6.75e1
variant carriers: 63

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 23

GenotypeQuality
all individuals: 117
bin: 4.75e1
variant carriers: 48

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 94

GenotypeQuality
all individuals: 144
bin: 7.75e1
variant carriers: 35

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 59

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 41

GenotypeQuality
all individuals: 3889
bin: 2.25e1
variant carriers: 64

GenotypeQuality
all individuals: 412
bin: 9.75e1
variant carriers: 152

European (Non-Finnish)
type: Population
allele count: 149
allele frequency: 2.356103731815307e-2
allele num: 6324
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 8.474576271186441e-3
allele num: 1298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 5.416666666666667e-2
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 101
allele frequency: 1.84981684981685e-1
allele num: 546
num of homozygotes: 0

East Asian
type: Population
allele count: 72
allele frequency: 1.153846153846154e-1
allele num: 624
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 3.409090909090909e-2
allele num: 176
num of homozygotes: 0

South Asian
type: Population
allele count: 65
allele frequency: 1.20236773954865e-2
allele num: 5406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.044e0

DP
type: SiteQuality
SIO_000300: 9.85449e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.173e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQ
type: SiteQuality
SIO_000300: 4.978e1

FS
type: SiteQuality
SIO_000300: 1.295e0

QD
type: SiteQuality
SIO_000300: 4.77e0

GenotypeQuality
all individuals: 764
bin: 1.25e1
variant carriers: 30

GenotypeQuality
all individuals: 81
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 124
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 310
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 30

GenotypeQuality
all individuals: 4861
bin: 2.5e0
variant carriers: 25

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 20

GenotypeQuality
all individuals: 12742
bin: 7.5e0
variant carriers: 16

GenotypeQuality
all individuals: 360
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 580
bin: 2.75e1
variant carriers: 37

GenotypeQuality
all individuals: 4206
bin: 2.25e1
variant carriers: 32

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 12

GenotypeQuality
all individuals: 479
bin: 1.75e1
variant carriers: 26

GenotypeQuality
all individuals: 107
bin: 7.25e1
variant carriers: 12

Other
type: Population
allele count: 1
allele frequency: 5.681818181818182e-3
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 2.533783783783784e-2
allele num: 592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.214574898785425e-2
allele num: 494
num of homozygotes: 0

Latino
type: Population
allele count: 34
allele frequency: 7.692307692307693e-2
allele num: 442
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.25689404934688e-4
allele num: 1378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.094631483166515e-3
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.774937877174299e-3
allele num: 5634
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.63e-2

MQ
type: SiteQuality
SIO_000300: 5.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 9.83045e5

FS
type: SiteQuality
SIO_000300: 1.592e0

QD
type: SiteQuality
SIO_000300: 4.46e0

GenotypeQuality
all individuals: 15782
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 30
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 465
bin: 1.75e1
variant carriers: 14

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3803
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 119
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 552
bin: 2.75e1
variant carriers: 18

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 11

GenotypeQuality
all individuals: 397
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1358
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 288
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 838
bin: 1.25e1
variant carriers: 17

GenotypeQuality
all individuals: 77
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.54320987654321e-2
allele num: 648
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 2.252252252252252e-2
allele num: 444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.145922746781116e-3
allele num: 6990
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 1.188051595383571e-3
allele num: 5892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.75999e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.387e0

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 5.018e1

QD
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.67e-2

FS
type: SiteQuality
SIO_000300: 9.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
all individuals: 2985
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 843
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19095
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 451
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 123
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4847
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 29
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.288629737609329e-3
allele num: 686
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.629195177582274e-4
allele num: 6138
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.366812227074236e-3
allele num: 458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.0e-3
allele num: 200
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.194743130227001e-3
allele num: 1674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.677852348993289e-3
allele num: 596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 8.992000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 6.05e0

MQ
type: SiteQuality
SIO_000300: 5.037e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.549e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

QD
type: SiteQuality
SIO_000300: 6.03e0

DP
type: SiteQuality
SIO_000300: 9.6689e5

GenotypeQuality
all individuals: 123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4847
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19095
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 2.280873248615184e-3
allele num: 6138
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.549e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.037e1

DP
type: SiteQuality
SIO_000300: 9.6689e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

VQSLOD
type: SiteQuality
SIO_000300: 6.05e0

QD
type: SiteQuality
SIO_000300: 6.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 8.992000000000001e0

GenotypeQuality
all individuals: 2985
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19095
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.682403433476395e-4
allele num: 7456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 9.6689e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.549e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.05e0

QD
type: SiteQuality
SIO_000300: 6.03e0

FS
type: SiteQuality
SIO_000300: 8.992000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.037e1

GenotypeQuality
all individuals: 214
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1403
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6526
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 43
bin: 9.25e1
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GenotypeQuality
all individuals: 112
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.358695652173913e-3
allele num: 736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.039717196922437e-4
allele num: 9618
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.393e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.67e-2

MQ
type: SiteQuality
SIO_000300: 5.167e1

FS
type: SiteQuality
SIO_000300: 2.408e0

VQSLOD
type: SiteQuality
SIO_000300: -6.593e-1

QD
type: SiteQuality
SIO_000300: 3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.267e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 9.33434e5

GenotypeQuality
all individuals: 742
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 2.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.173708920187793e-3
allele num: 852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.600614439324117e-5
allele num: 10416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.96078431372549e-3
allele num: 1020
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.74e-1

DP
type: SiteQuality
SIO_000300: 9.20604e5

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.148e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.118e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
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GenotypeQuality
all individuals: 290
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 3
allele frequency: 3.042596348884381e-3
allele num: 986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 2.538071065989848e-3
allele num: 1182
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.042596348884381e-3
allele num: 986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.745505323791238e-4
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.807411566535654e-4
allele num: 7124
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.083e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.026e0

DP
type: SiteQuality
SIO_000300: 9.07092e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-2

FS
type: SiteQuality
SIO_000300: 2.376e0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeQuality
all individuals: 242
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 293
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1339
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2942
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variant carriers: 4

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
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variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8880
bin: 2.25e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 5.567928730512249e-4
allele num: 12572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.77623542476402e-4
allele num: 7204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.470588235294118e-3
allele num: 1360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3138
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.440497335701598e-3
allele num: 1126
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -1.034e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e-1

MQ
type: SiteQuality
SIO_000300: 5.113e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

FS
type: SiteQuality
SIO_000300: 7.113e0

QD
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 8.93833e5

GenotypeQuality
all individuals: 575
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 743
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 1281
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GenotypeQuality
all individuals: 303
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variant carriers: 0

GenotypeQuality
all individuals: 56
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 257
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variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 1
allele frequency: 2.75027502750275e-4
allele num: 3636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.466275659824047e-3
allele num: 1364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.329113924050633e-4
allele num: 1580
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 9.345794392523365e-4
allele num: 1070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14092
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

DP
type: SiteQuality
SIO_000300: 8.81879e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.12e-2

MQ
type: SiteQuality
SIO_000300: 5.216e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 8.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 1391
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 166
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GenotypeQuality
all individuals: 83
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

DP
type: SiteQuality
SIO_000300: 8.71098e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.303e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.809999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 5.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 16717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 280
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GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.164755707055057e-5
allele num: 19362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1334
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 8.52273e5

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.395e1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
all individuals: 16717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.395e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 8.52273e5

GenotypeQuality
all individuals: 225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 19416
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GenotypeQuality
all individuals: 288
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GenotypeQuality
all individuals: 377
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.395e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.826e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.17e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 8.4717e5

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1480
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 2.957e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.19e-2

DP
type: SiteQuality
SIO_000300: 8.39094e5

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.1440329218107e-4
allele num: 1944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 2.957e0

QD
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 8.39094e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.19e-2

MQ
type: SiteQuality
SIO_000300: 5.662e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 33

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 15
allele frequency: 6.318449873631003e-3
allele num: 2374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.08695652173913e-3
allele num: 920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 1.446131597975416e-3
allele num: 11064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1276
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 1.2531328320802e-3
allele num: 3990
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.83373e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.146e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

MQRankSum
type: SiteQuality
SIO_000300: -5.91e-1

FS
type: SiteQuality
SIO_000300: 1.14516e2

QD
type: SiteQuality
SIO_000300: 4.7e0

VQSLOD
type: SiteQuality
SIO_000300: -7.209999999999999e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.874e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.96e0

MQ
type: SiteQuality
SIO_000300: 5.635e1

GenotypeQuality
all individuals: 1320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 676
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 615
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GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 218
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 7.840831128099579e-4
allele num: 20406
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.279829188646069e-4
allele num: 7962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 2.703746620316725e-3
allele num: 5178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 9.75609756097561e-4
allele num: 2050
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.228e0

DP
type: SiteQuality
SIO_000300: 8.12447e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.84e-2

MQ
type: SiteQuality
SIO_000300: 5.695e1

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
type: SiteQuality
SIO_000300: 5.37e0

FS
type: SiteQuality
SIO_000300: 3.4638e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.769e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.055e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e0

GenotypeQuality
all individuals: 13687
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1451
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 676
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 615
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GenotypeQuality
all individuals: 2921
bin: 6.25e1
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GenotypeQuality
all individuals: 1918
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.900519455062237e-5
allele num: 20406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.4638e1

DP
type: SiteQuality
SIO_000300: 8.12447e5

QD
type: SiteQuality
SIO_000300: 5.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.84e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.055e0

VQSLOD
type: SiteQuality
SIO_000300: -3.228e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e0

MQ
type: SiteQuality
SIO_000300: 5.695e1

GenotypeQuality
all individuals: 1017
bin: 7.75e1
variant carriers: 527

GenotypeQuality
all individuals: 1945
bin: 3.75e1
variant carriers: 967

GenotypeQuality
all individuals: 2876
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variant carriers: 1190

GenotypeQuality
all individuals: 2523
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variant carriers: 948

GenotypeQuality
all individuals: 1109
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variant carriers: 701

GenotypeQuality
all individuals: 1024
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variant carriers: 825

GenotypeQuality
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GenotypeQuality
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variant carriers: 578

GenotypeQuality
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variant carriers: 597

GenotypeQuality
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variant carriers: 388

GenotypeQuality
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variant carriers: 417

GenotypeQuality
all individuals: 1942
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variant carriers: 1232

GenotypeQuality
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bin: 2.25e1
variant carriers: 1461

GenotypeQuality
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bin: 4.25e1
variant carriers: 782

GenotypeQuality
all individuals: 792
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variant carriers: 531

GenotypeQuality
all individuals: 13395
bin: 9.75e1
variant carriers: 11980

GenotypeQuality
all individuals: 1373
bin: 4.75e1
variant carriers: 879

GenotypeQuality
all individuals: 936
bin: 8.75e1
variant carriers: 706

European (Finnish)
type: Population
allele count: 1194
allele frequency: 3.311148086522462e-1
allele num: 3606
num of homozygotes: 186

Other
type: Population
allele count: 137
allele frequency: 2.784552845528455e-1
allele num: 492
num of homozygotes: 23

East Asian
type: Population
allele count: 3327
allele frequency: 8.338345864661654e-1
allele num: 3990
num of homozygotes: 1373

African
type: Population
allele count: 1014
allele frequency: 1.653620352250489e-1
allele num: 6132
num of homozygotes: 75

Latino
type: Population
allele count: 3224
allele frequency: 5.726465364120782e-1
allele num: 5630
num of homozygotes: 907

European (Non-Finnish)
type: Population
allele count: 7426
allele frequency: 2.708637292092209e-1
allele num: 27416
num of homozygotes: 911

South Asian
type: Population
allele count: 3559
allele frequency: 3.653253951960583e-1
allele num: 9742
num of homozygotes: 680

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.56147e5

QD
type: SiteQuality
SIO_000300: 1.997e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.085e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

GenotypeQuality
all individuals: 278
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3657
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GenotypeQuality
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GenotypeQuality
all individuals: 4175
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GenotypeQuality
all individuals: 484
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GenotypeQuality
all individuals: 536
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GenotypeQuality
all individuals: 5829
bin: 3.25e1
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GenotypeQuality
all individuals: 1011
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variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.109839532280134e-5
allele num: 32156
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.21e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.609e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.048518e6

MQ
type: SiteQuality
SIO_000300: 5.829e1

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2198
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 5485
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20520
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2694
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3681
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 720
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4718
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.420454545454545e-4
allele num: 7040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.620545073375262e-4
allele num: 3816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 5.726686358430285e-4
allele num: 33178
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.934e0

DP
type: SiteQuality
SIO_000300: 1.079508e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.689e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

QD
type: SiteQuality
SIO_000300: 1.056e1

MQ
type: SiteQuality
SIO_000300: 5.67e1

GenotypeQuality
all individuals: 1225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 19391
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3911
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 584
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5010
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7684
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.17111e6

QD
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: -1.738e0

MQ
type: SiteQuality
SIO_000300: 5.5e1

VQSLOD
type: SiteQuality
SIO_000300: -1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

GenotypeQuality
all individuals: 4822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569809425135789e-5
allele num: 63702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.770000000000001e-2

DP
type: SiteQuality
SIO_000300: 2.317497e6

QD
type: SiteQuality
SIO_000300: 2.657e1

GenotypeQuality
all individuals: 2603
bin: 7.75e1
variant carriers: 2509

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 139

GenotypeQuality
all individuals: 1158
bin: 8.75e1
variant carriers: 1116

GenotypeQuality
all individuals: 2688
bin: 5.25e1
variant carriers: 2672

GenotypeQuality
all individuals: 1493
bin: 5.75e1
variant carriers: 1473

GenotypeQuality
all individuals: 797
bin: 2.25e1
variant carriers: 602

GenotypeQuality
all individuals: 1237
bin: 3.25e1
variant carriers: 1215

GenotypeQuality
all individuals: 2294
bin: 8.25e1
variant carriers: 2218

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 507

GenotypeQuality
all individuals: 325
bin: 1.75e1
variant carriers: 313

GenotypeQuality
all individuals: 312
bin: 2.5e0
variant carriers: 110

GenotypeQuality
all individuals: 3023
bin: 6.75e1
variant carriers: 2720

GenotypeQuality
all individuals: 1715
bin: 3.75e1
variant carriers: 1694

GenotypeQuality
all individuals: 1057
bin: 4.25e1
variant carriers: 1036

GenotypeQuality
all individuals: 4822
bin: 6.25e1
variant carriers: 2699

GenotypeQuality
all individuals: 30610
bin: 9.75e1
variant carriers: 30355

GenotypeQuality
all individuals: 2355
bin: 4.75e1
variant carriers: 2336

GenotypeQuality
all individuals: 1496
bin: 7.25e1
variant carriers: 1394

South Asian
type: Population
allele count: 13071
allele frequency: 8.084487877288471e-1
allele num: 16168
num of homozygotes: 5311

European (Non-Finnish)
type: Population
allele count: 49989
allele frequency: 7.847320335311293e-1
allele num: 63702
num of homozygotes: 19477

Latino
type: Population
allele count: 10183
allele frequency: 8.979717813051147e-1
allele num: 11340
num of homozygotes: 4587

European (Finnish)
type: Population
allele count: 5311
allele frequency: 8.198518061129978e-1
allele num: 6478
num of homozygotes: 2170

Other
type: Population
allele count: 675
allele frequency: 7.567264573991032e-1
allele num: 892
num of homozygotes: 264

African
type: Population
allele count: 4866
allele frequency: 4.831215250198571e-1
allele num: 10072
num of homozygotes: 1147

East Asian
type: Population
allele count: 8394
allele frequency: 9.912612187057156e-1
allele num: 8468
num of homozygotes: 4161

DP
type: SiteQuality
SIO_000300: 2.317497e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.770000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

QD
type: SiteQuality
SIO_000300: 2.657e1

MQ
type: SiteQuality
SIO_000300: 5.705e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

GenotypeQuality
all individuals: 1062
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30661
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.828975820719482e-5
allele num: 10174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 4.23e0

DP
type: SiteQuality
SIO_000300: 1.802605e6

FS
type: SiteQuality
SIO_000300: 3.105e0

MQ
type: SiteQuality
SIO_000300: 5.583e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.359e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35827
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7190
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5025
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 577
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.148515474953559e-5
allele num: 63522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.696e1

QD
type: SiteQuality
SIO_000300: 2.73e0

DP
type: SiteQuality
SIO_000300: 1.824955e6

MQRankSum
type: SiteQuality
SIO_000300: -2.9e0

MQ
type: SiteQuality
SIO_000300: 5.066e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.005e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.473e0

GenotypeQuality
all individuals: 592
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3302
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35809
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576342255430499e-5
allele num: 63438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.425e0

FS
type: SiteQuality
SIO_000300: 3.63e0

DP
type: SiteQuality
SIO_000300: 1.824564e6

MQ
type: SiteQuality
SIO_000300: 5.606e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
type: SiteQuality
SIO_000300: 5.29e0

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 1910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3651
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
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variant carriers: 0

GenotypeQuality
all individuals: 857
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 488
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variant carriers: 0

GenotypeQuality
all individuals: 7084
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 35667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63244
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.236746912810279e-5
allele num: 16034
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
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SIO_000300: -2.16e0

ReadPosRankSum
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SIO_000300: -2.343e0

QD
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SIO_000300: 9.880000000000001e0

VQSLOD
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SIO_000300: -6.16e0

FS
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SIO_000300: 6.85e0

MQRankSum
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SIO_000300: -1.258e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.823906e6

MQ
type: SiteQuality
SIO_000300: 3.637e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.222687721559781e-5
allele num: 62060
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.261352169525732e-4
allele num: 15856
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.372e0

BaseQRankSum
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SIO_000300: -1.453e0

ReadPosRankSum
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SIO_000300: -3.18e-1

ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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SIO_000300: 1.773286e6

MQ
type: SiteQuality
SIO_000300: 5.627e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.34e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61956
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.317917614354308e-5
allele num: 15828
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.572e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: -1.132e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.764029e6

FS
type: SiteQuality
SIO_000300: 5.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

MQ
type: SiteQuality
SIO_000300: 5.403e1

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.942334460131238e-5
allele num: 10058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61834
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.6e-1

MQ
type: SiteQuality
SIO_000300: 5.582e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.129e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.48e0

DP
type: SiteQuality
SIO_000300: 1.753081e6

FS
type: SiteQuality
SIO_000300: 5.844e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.815e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62216526619732e-5
allele num: 61646
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.217e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.34e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.746509e6

MQRankSum
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SIO_000300: -7.76e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15726
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61304
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South Asian
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MQ
type: SiteQuality
SIO_000300: 5.838e1

MQRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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FS
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DP
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BaseQRankSum
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VQSLOD
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4968
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.020539669754329e-4
allele num: 9932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15678
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.224e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

MQ
type: SiteQuality
SIO_000300: 5.657e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.829999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

DP
type: SiteQuality
SIO_000300: 1.67679e6