16-2049733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049733
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049733
    reference: chr 16
allele count: 2
allele frequency: 1.82882223847842e-5
allele num: 109360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1906C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1652C>T
  hgvsp: ENSP00000455882.1:p.Pro551Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1652C>T
  hgvsp: ENSP00000455308.1:p.Pro551Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2754C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1817C>T
  hgvsp: ENSP00000411409.1:p.Pro606Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1915C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.340C>T
  hgvsp: ENSP00000456128.1:p.Pro114Leu
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro606Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

16-2049734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049734
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049734
    reference: chr 16
allele count: 1
allele frequency: 9.134088417975885e-6
allele num: 109480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1905C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1651C>T
  hgvsp: ENSP00000455882.1:p.Pro551Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1816C>T
  hgvsp: ENSP00000411409.1:p.Pro606Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1651C>T
  hgvsp: ENSP00000455308.1:p.Pro551Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2753C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.339C>T
  hgvsp: ENSP00000456128.1:p.Pro114Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1914C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20709
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro606Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-2049735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049735
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049735
    reference: chr 16
allele count: 1
allele frequency: 9.136258154110402e-6
allele num: 109454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1913C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.338C>T
  hgvsp: ENST00000564556.1:c.338C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1815C>T
  hgvsp: ENST00000431526.1:c.1815C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1904C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1650C>T
  hgvsp: ENST00000563630.1:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1650C>T
  hgvsp: ENST00000562103.1:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2752C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5188
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro605Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

16-2049736-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049736
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049736
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 109448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1903C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1814C>T
  hgvsp: ENSP00000411409.1:p.Pro605Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1649C>T
  hgvsp: ENSP00000455308.1:p.Pro550Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1649C>T
  hgvsp: ENSP00000455882.1:p.Pro550Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2751C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.337C>T
  hgvsp: ENSP00000456128.1:p.Pro113Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1912C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro605Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

16-2049736-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049736
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049736
    reference: chr 16
allele count: 2
allele frequency: 1.827351801768876e-5
allele num: 109448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2751C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1814C>A
  hgvsp: ENSP00000411409.1:p.Pro605His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1649C>A
  hgvsp: ENSP00000455308.1:p.Pro550His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1649C>A
  hgvsp: ENSP00000455882.1:p.Pro550His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1903C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.337C>A
  hgvsp: ENSP00000456128.1:p.Pro113His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1912C>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20641
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro605His
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2049738-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049738
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049738
    reference: chr 16
allele count: 2
allele frequency: 1.829290601104892e-5
allele num: 109332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1647G>A
  hgvsp: ENST00000563630.1:c.1647G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.335G>A
  hgvsp: ENST00000564556.1:c.335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1910G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1812G>A
  hgvsp: ENST00000431526.1:c.1812G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1647G>A
  hgvsp: ENST00000562103.1:c.1647G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2749G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1901G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21811
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln604Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

16-2049743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049743
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049743
    reference: chr 16
allele count: 4
allele frequency: 3.671071953010279e-5
allele num: 108960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2744C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1896C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1905C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1807C>T
  hgvsp: ENSP00000411409.1:p.Pro603Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.330C>T
  hgvsp: ENSP00000456128.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1642C>T
  hgvsp: ENSP00000455308.1:p.Pro548Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1642C>T
  hgvsp: ENSP00000455882.1:p.Pro548Ser
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20388
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36280
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro603Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-2049747-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049747
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049747
    reference: chr 16
allele count: 1
allele frequency: 9.186279373128296e-6
allele num: 108858
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1803A>G
  hgvsp: ENST00000431526.1:c.1803A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2740A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1892A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1638A>G
  hgvsp: ENST00000562103.1:c.1638A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.326A>G
  hgvsp: ENST00000564556.1:c.326A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1638A>G
  hgvsp: ENST00000563630.1:c.1638A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1901A>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20276
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5298
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr601Thr
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-2049754-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049754
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049754
    reference: chr 16
allele count: 1
allele frequency: 9.251378455389853e-6
allele num: 108092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.319G>T
  hgvsp: ENSP00000456128.1:p.Gly107Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1796G>T
  hgvsp: ENSP00000411409.1:p.Gly599Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1631G>T
  hgvsp: ENSP00000455882.1:p.Gly544Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1631G>T
  hgvsp: ENSP00000455308.1:p.Gly544Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1894G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1885G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2733G>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21678
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6618
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly599Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

16-2049756-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049756
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049756
    reference: chr 16
allele count: 9
allele frequency: 8.321621421702789e-5
allele num: 108152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1629A>C
  hgvsp: ENST00000563630.1:c.1629A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1629A>C
  hgvsp: ENST00000562103.1:c.1629A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1892A>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1794A>C
  hgvsp: ENST00000431526.1:c.1794A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.317A>C
  hgvsp: ENST00000564556.1:c.317A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1883A>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2731A>C
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21878
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro598Pro
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-2049763-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049763
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049763
    reference: chr 16
allele count: 4
allele frequency: 3.725157853564045e-5
allele num: 107378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.310A>G
  hgvsp: ENSP00000456128.1:p.Glu104Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1787A>G
  hgvsp: ENSP00000411409.1:p.Glu596Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1622A>G
  hgvsp: ENSP00000455882.1:p.Glu541Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1885A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1622A>G
  hgvsp: ENSP00000455308.1:p.Glu541Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2724A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1876A>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22051
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19258
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35672
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu596Gly
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-2049765-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049765
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049765
    reference: chr 16
allele count: 72
allele frequency: 6.725703396480216e-4
allele num: 107052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1874G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1785G>A
  hgvsp: ENST00000431526.1:c.1785G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1620G>A
  hgvsp: ENST00000562103.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2722G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1883G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1620G>A
  hgvsp: ENST00000563630.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.308G>A
  hgvsp: ENST00000564556.1:c.308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22008
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19132
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser595Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

16-2049766-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049766
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049766
    reference: chr 16
allele count: 1
allele frequency: 9.348939830223253e-6
allele num: 106964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1882C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1619C>G
  hgvsp: ENSP00000455882.1:p.Ser540Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1873C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1619C>G
  hgvsp: ENSP00000455308.1:p.Ser540Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2721C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1784C>G
  hgvsp: ENSP00000411409.1:p.Ser595Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.307C>G
  hgvsp: ENSP00000456128.1:p.Ser103Trp
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19041
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7679
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser595Trp
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-2049768-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049768
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049768
    reference: chr 16
allele count: 21
allele frequency: 1.968171849519204e-4
allele num: 106698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1880C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.305C>T
  hgvsp: ENST00000564556.1:c.305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2719C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1782C>T
  hgvsp: ENST00000431526.1:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1617C>T
  hgvsp: ENST00000562103.1:c.1617C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1871C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1617C>T
  hgvsp: ENST00000563630.1:c.1617C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18887
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22042
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly594Gly
num of homozygotes: 1
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

16-2049771-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049771
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049771
    reference: chr 16
allele count: 2
allele frequency: 1.882849127299429e-5
allele num: 106222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1877G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.302G>A
  hgvsp: ENST00000564556.1:c.302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1779G>A
  hgvsp: ENST00000431526.1:c.1779G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1614G>A
  hgvsp: ENST00000562103.1:c.1614G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1868G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2716G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1614G>A
  hgvsp: ENST00000563630.1:c.1614G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21910
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18659
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val593Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

16-2049774-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049774
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049774
    reference: chr 16
allele count: 2
allele frequency: 1.898794265641318e-5
allele num: 105330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1874A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2713A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.299A>G
  hgvsp: ENST00000564556.1:c.299A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1776A>G
  hgvsp: ENST00000431526.1:c.1776A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1611A>G
  hgvsp: ENST00000563630.1:c.1611A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1611A>G
  hgvsp: ENST00000562103.1:c.1611A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1865A>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18167
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8963
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys592Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

16-2049780-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049780
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049780
    reference: chr 16
allele count: 2
allele frequency: 1.913509376195943e-5
allele num: 104520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.293G>A
  hgvsp: ENST00000564556.1:c.293G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1605G>A
  hgvsp: ENST00000563630.1:c.1605G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1868G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1770G>A
  hgvsp: ENST00000431526.1:c.1770G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2707G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1605G>A
  hgvsp: ENST00000562103.1:c.1605G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1859G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17566
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4143
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Lys590Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-2049783-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049783
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049783
    reference: chr 16
allele count: 1
allele frequency: 9.640412609659693e-6
allele num: 103730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.290G>T
  hgvsp: ENSP00000456128.1:p.Lys97Asn
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1856G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1602G>T
  hgvsp: ENSP00000455882.1:p.Lys534Asn
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1602G>T
  hgvsp: ENSP00000455308.1:p.Lys534Asn
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2704G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1767G>T
  hgvsp: ENSP00000411409.1:p.Lys589Asn
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1865G>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16997
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4010
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys589Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

16-2049786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049786
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049786
    reference: chr 16
allele count: 1
allele frequency: 9.691988602221403e-6
allele num: 103178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1599G>A
  hgvsp: ENST00000562103.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2701G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1853G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.287G>A
  hgvsp: ENST00000564556.1:c.287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1862G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1764G>A
  hgvsp: ENST00000431526.1:c.1764G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1599G>A
  hgvsp: ENST00000563630.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32633
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly588Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

16-2049787-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049787
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049787
    reference: chr 16
allele count: 1
allele frequency: 9.719495363800712e-6
allele num: 102886
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1763G>C
  hgvsp: ENSP00000411409.1:p.Gly588Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1598G>C
  hgvsp: ENSP00000455308.1:p.Gly533Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1852G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1598G>C
  hgvsp: ENSP00000455882.1:p.Gly533Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2700G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.286G>C
  hgvsp: ENSP00000456128.1:p.Gly96Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1861G>C
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16494
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly588Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-2049788-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049788
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049788
    reference: chr 16
allele count: 2
allele frequency: 1.950039975819504e-5
allele num: 102562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2699G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1851G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1597G>T
  hgvsp: ENSP00000455308.1:p.Gly533Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.285G>T
  hgvsp: ENSP00000456128.1:p.Gly96Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1860G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1597G>T
  hgvsp: ENSP00000455882.1:p.Gly533Trp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1762G>T
  hgvsp: ENSP00000411409.1:p.Gly588Trp
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20223
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11340
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31826
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly588Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

16-2049789-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049789
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049789
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 102442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.284T>A
  hgvsp: ENST00000564556.1:c.284T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2698T>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1596T>A
  hgvsp: ENST00000563630.1:c.1596T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1850T>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1596T>A
  hgvsp: ENST00000562103.1:c.1596T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1859T>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1761T>A
  hgvsp: ENST00000431526.1:c.1761T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11601
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val587Val
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

16-2049791-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049791
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049791
    reference: chr 16
allele count: 1
allele frequency: 9.817781966698083e-6
allele num: 101856
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1594G>C
  hgvsp: ENSP00000455882.1:p.Val532Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1848G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2696G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1594G>C
  hgvsp: ENSP00000455308.1:p.Val532Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1759G>C
  hgvsp: ENSP00000411409.1:p.Val587Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1857G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.282G>C
  hgvsp: ENSP00000456128.1:p.Val95Leu
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val587Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

16-2049791-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049791
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049791
    reference: chr 16
allele count: 9
allele frequency: 8.836003770028276e-5
allele num: 101856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1594G>A
  hgvsp: ENSP00000455882.1:p.Val532Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.282G>A
  hgvsp: ENSP00000456128.1:p.Val95Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1848G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1594G>A
  hgvsp: ENSP00000455308.1:p.Val532Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2696G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1759G>A
  hgvsp: ENSP00000411409.1:p.Val587Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1857G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19618
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15945
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val587Ile
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-2049816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049816
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049816
    reference: chr 16
allele count: 1
allele frequency: 1.087760518644215e-5
allele num: 91932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1569G>A
  hgvsp: ENST00000563630.1:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1832G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2671G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1734G>A
  hgvsp: ENST00000431526.1:c.1734G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1569G>A
  hgvsp: ENST00000562103.1:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1823G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.257G>A
  hgvsp: ENST00000564556.1:c.257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10026
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14441
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3293
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly578Gly
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

16-2049821-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049821
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049821
    reference: chr 16
allele count: 1
allele frequency: 1.123166430801716e-5
allele num: 89034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.252C>G
  hgvsp: ENSP00000456128.1:p.Leu85Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1729C>G
  hgvsp: ENSP00000411409.1:p.Leu577Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1564C>G
  hgvsp: ENSP00000455882.1:p.Leu522Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1564C>G
  hgvsp: ENSP00000455308.1:p.Leu522Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1827C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2666C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1818C>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22824
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu577Val
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

16-2049824-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049824
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049824
    reference: chr 16
allele count: 6
allele frequency: 6.843065693430658e-5
allele num: 87680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1815A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.249A>G
  hgvsp: ENSP00000456128.1:p.Thr84Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1824A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1726A>G
  hgvsp: ENSP00000411409.1:p.Thr576Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1561A>G
  hgvsp: ENSP00000455308.1:p.Thr521Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2663A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1561A>G
  hgvsp: ENSP00000455882.1:p.Thr521Ala
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17008
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9422
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14961
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr576Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

16-2049824-TGGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049824
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049821
    reference: chr 16
allele count: 1
allele frequency: 1.140510948905109e-5
allele num: 87680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1821_1823delTCC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1812_1814delTCC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1723_1725delTCC
  hgvsp: ENSP00000411409.1:p.Ser575del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1558_1560delTCC
  hgvsp: ENSP00000455882.1:p.Ser520del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.246_248delTCC
  hgvsp: ENSP00000456128.1:p.Ser83del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2660_2662delTCC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1558_1560delTCC
  hgvsp: ENSP00000455308.1:p.Ser520del
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23745
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser575del
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: TGGA
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2049826-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049826
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049826
    reference: chr 16
allele count: 1
allele frequency: 1.167242506303109e-5
allele num: 85672
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2661C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1724C>G
  hgvsp: ENSP00000411409.1:p.Ser575Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1822C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1559C>G
  hgvsp: ENSP00000455882.1:p.Ser520Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1813C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1559C>G
  hgvsp: ENSP00000455308.1:p.Ser520Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.247C>G
  hgvsp: ENSP00000456128.1:p.Ser83Cys
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2565
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3748
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser575Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-2049829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049829
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049829
    reference: chr 16
allele count: 1
allele frequency: 1.174149915461206e-5
allele num: 85168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.244C>T
  hgvsp: ENSP00000456128.1:p.Ser82Phe
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1819C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1810C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1556C>T
  hgvsp: ENSP00000455308.1:p.Ser519Phe
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1721C>T
  hgvsp: ENSP00000411409.1:p.Ser574Phe
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1556C>T
  hgvsp: ENSP00000455882.1:p.Ser519Phe
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2658C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser574Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

16-2049829-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049829
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049829
    reference: chr 16
allele count: 8
allele frequency: 9.393199323689649e-5
allele num: 85168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1819C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1721C>A
  hgvsp: ENSP00000411409.1:p.Ser574Tyr
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.244C>A
  hgvsp: ENSP00000456128.1:p.Ser82Tyr
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1556C>A
  hgvsp: ENSP00000455882.1:p.Ser519Tyr
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2658C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1810C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1556C>A
  hgvsp: ENSP00000455308.1:p.Ser519Tyr
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14564
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17723
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser574Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

16-2049831-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049831
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049831
    reference: chr 16
allele count: 131
allele frequency: 1.572138348174639e-3
allele num: 83326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2656C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1719C>G
  hgvsp: ENST00000431526.1:c.1719C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1808C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1554C>G
  hgvsp: ENST00000562103.1:c.1554C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.242C>G
  hgvsp: ENST00000564556.1:c.242C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1817C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1554C>G
  hgvsp: ENST00000563630.1:c.1554C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7527
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18089
  bin: 1.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 9.75e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10273
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val573Val
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

16-2049833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049833
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049833
    reference: chr 16
allele count: 2
allele frequency: 2.433800623052959e-5
allele num: 82176
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1717G>A
  hgvsp: ENSP00000411409.1:p.Val573Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.240G>A
  hgvsp: ENSP00000456128.1:p.Val81Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1552G>A
  hgvsp: ENSP00000455308.1:p.Val518Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1552G>A
  hgvsp: ENSP00000455882.1:p.Val518Ile
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1815G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1806G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2654G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25220
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val573Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

16-2049834-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049834
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049834
    reference: chr 16
allele count: 2
allele frequency: 2.492087621800782e-5
allele num: 80254
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1716C>T
  hgvsp: ENST00000431526.1:c.1716C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1551C>T
  hgvsp: ENST00000563630.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.239C>T
  hgvsp: ENST00000564556.1:c.239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1551C>T
  hgvsp: ENST00000562103.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2653C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1814C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1805C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25060
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3949
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser572Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

16-2049837-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049837
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049837
    reference: chr 16
allele count: 9
allele frequency: 1.145009032849037e-4
allele num: 78602
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1713C>G
  hgvsp: ENST00000431526.1:c.1713C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1811C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.236C>G
  hgvsp: ENST00000564556.1:c.236C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2650C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1548C>G
  hgvsp: ENST00000563630.1:c.1548C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1548C>G
  hgvsp: ENST00000562103.1:c.1548C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1802C>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18047
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16742
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 8073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly571Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/16-2049838-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049838
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049838
    reference: chr 16
allele count: 2
allele frequency: 2.551085486874665e-5
allele num: 78398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2649G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1712G>T
  hgvsp: ENSP00000411409.1:p.Gly571Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1547G>T
  hgvsp: ENSP00000455308.1:p.Gly516Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1801G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1810G>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1547G>T
  hgvsp: ENSP00000455882.1:p.Gly516Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.235G>T
  hgvsp: ENSP00000456128.1:p.Gly79Val
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3947
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly571Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

16-2049840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049840
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049840
    reference: chr 16
allele count: 1
allele frequency: 1.308352522503663e-5
allele num: 76432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1799G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.233G>A
  hgvsp: ENST00000564556.1:c.233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2647G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1545G>A
  hgvsp: ENST00000563630.1:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1710G>A
  hgvsp: ENST00000431526.1:c.1710G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1808G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1545G>A
  hgvsp: ENST00000562103.1:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17411
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4598
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr570Thr
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

16-2049841-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049841
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049841
    reference: chr 16
allele count: 10
allele frequency: 1.322646350818718e-4
allele num: 75606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.232C>T
  hgvsp: ENSP00000456128.1:p.Thr78Met
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2646C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1544C>T
  hgvsp: ENSP00000455308.1:p.Thr515Met
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1798C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1709C>T
  hgvsp: ENSP00000411409.1:p.Thr570Met
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1807C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1544C>T
  hgvsp: ENSP00000455882.1:p.Thr515Met
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17768
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17754
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25322
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr570Met
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-2049842-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049842
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049842
    reference: chr 16
allele count: 36
allele frequency: 4.758254249385392e-4
allele num: 75658
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1708A>G
  hgvsp: ENSP00000411409.1:p.Thr570Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.231A>G
  hgvsp: ENSP00000456128.1:p.Thr78Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1797A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1543A>G
  hgvsp: ENSP00000455882.1:p.Thr515Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1543A>G
  hgvsp: ENSP00000455308.1:p.Thr515Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1806A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2645A>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17937
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17726
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3042
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7453
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3974
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr570Ala
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD

16-2049844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049844
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049844
    reference: chr 16
allele count: 1
allele frequency: 1.331487004686834e-5
allele num: 75104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1804C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1541C>T
  hgvsp: ENSP00000455882.1:p.Pro514Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1795C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2643C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1706C>T
  hgvsp: ENSP00000411409.1:p.Pro569Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1541C>T
  hgvsp: ENSP00000455308.1:p.Pro514Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.229C>T
  hgvsp: ENSP00000456128.1:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro569Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

16-2049846-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049846
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049846
    reference: chr 16
allele count: 2
allele frequency: 2.692007429940506e-5
allele num: 74294
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1704C>A
  hgvsp: ENST00000431526.1:c.1704C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.227C>A
  hgvsp: ENST00000564556.1:c.227C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1793C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1539C>A
  hgvsp: ENST00000562103.1:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1539C>A
  hgvsp: ENST00000563630.1:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1802C>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2641C>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18508
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3938
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg568Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

16-2049847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049847
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049847
    reference: chr 16
allele count: 3
allele frequency: 4.093774733222347e-5
allele num: 73282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1792G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1703G>A
  hgvsp: ENSP00000411409.1:p.Arg568His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1538G>A
  hgvsp: ENSP00000455308.1:p.Arg513His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2640G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.226G>A
  hgvsp: ENSP00000456128.1:p.Arg76His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1538G>A
  hgvsp: ENSP00000455882.1:p.Arg513His
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1801G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17603
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26041
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg568His
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-2049848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049848
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049848
    reference: chr 16
allele count: 3
allele frequency: 4.121785007693999e-5
allele num: 72784
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1702C>T
  hgvsp: ENSP00000411409.1:p.Arg568Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.225C>T
  hgvsp: ENSP00000456128.1:p.Arg76Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2639C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1800C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1537C>T
  hgvsp: ENSP00000455882.1:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1537C>T
  hgvsp: ENSP00000455308.1:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1791C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18776
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4402
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26264
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7152
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg568Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

16-2049849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049849
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049849
    reference: chr 16
allele count: 16109
allele frequency: 2.218564935959234e-1
allele num: 72610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1790A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1536A>G
  hgvsp: ENST00000563630.1:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1536A>G
  hgvsp: ENST00000562103.1:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2638A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1701A>G
  hgvsp: ENST00000431526.1:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.224A>G
  hgvsp: ENST00000564556.1:c.224A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1799A>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 2.5e0
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 18561
  bin: 7.5e0
  variant carriers: 2450
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.25e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 1.75e1
  variant carriers: 4262
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 17530
  bin: 1.25e1
  variant carriers: 5202
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 2.75e1
  variant carriers: 630
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 2.25e1
  variant carriers: 2041
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 1446
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.75e1
  variant carriers: 349
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 7.5e0
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 4.75e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 247
genotype quality: GenotypeQuality
  all individuals: 12689
  bin: 9.75e1
  variant carriers: 12621
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 1.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 239
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 8.25e1
  variant carriers: 377
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.25e1
  variant carriers: 199
hgvs: p.Thr567Thr
num of homozygotes: 1575
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-2049857-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049857
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049857
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 66678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2630C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1528C>G
  hgvsp: ENSP00000455882.1:p.Leu510Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1782C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.216C>G
  hgvsp: ENSP00000456128.1:p.Leu73Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1693C>G
  hgvsp: ENSP00000411409.1:p.Leu565Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1528C>G
  hgvsp: ENSP00000455308.1:p.Leu510Val
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1791C>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 19394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20465
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu565Val
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

16-2049861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049861
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049861
    reference: chr 16
allele count: 1
allele frequency: 1.572228161750833e-5
allele num: 63604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1787G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1524G>A
  hgvsp: ENST00000563630.1:c.1524G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.212G>A
  hgvsp: ENST00000564556.1:c.212G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1778G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1524G>A
  hgvsp: ENST00000562103.1:c.1524G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2626G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1689G>A
  hgvsp: ENST00000431526.1:c.1689G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu563Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

16-2049862-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049862
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049862
    reference: chr 16
allele count: 5
allele frequency: 7.985179506835313e-5
allele num: 62616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1777A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1786A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1523A>G
  hgvsp: ENSP00000455308.1:p.Glu508Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.211A>G
  hgvsp: ENSP00000456128.1:p.Glu71Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1688A>G
  hgvsp: ENSP00000411409.1:p.Glu563Gly
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2625A>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1523A>G
  hgvsp: ENSP00000455882.1:p.Glu508Gly
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18602
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5166
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1482
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu563Gly
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

16-2049868-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049868
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049868
    reference: chr 16
allele count: 1
allele frequency: 1.839655616468597e-5
allele num: 54358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1517T>C
  hgvsp: ENSP00000455308.1:p.Leu506Pro
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1780T>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1517T>C
  hgvsp: ENSP00000455882.1:p.Leu506Pro
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1771T>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2619T>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.205T>C
  hgvsp: ENSP00000456128.1:p.Leu69Pro
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1682T>C
  hgvsp: ENSP00000411409.1:p.Leu561Pro
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22823
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11781
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2241
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu561Pro
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

16-2049869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049869
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049869
    reference: chr 16
allele count: 2
allele frequency: 3.930817610062893e-5
allele num: 50880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1779C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1681C>T
  hgvsp: ENST00000431526.1:c.1681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2618C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1770C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1516C>T
  hgvsp: ENST00000562103.1:c.1516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1516C>T
  hgvsp: ENST00000563630.1:c.1516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.204C>T
  hgvsp: ENST00000564556.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15997
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23337
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu561Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

16-2049870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049870
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049870
    reference: chr 16
allele count: 1
allele frequency: 1.975503753457132e-5
allele num: 50620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1769C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1515C>T
  hgvsp: ENST00000562103.1:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1680C>T
  hgvsp: ENST00000431526.1:c.1680C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1778C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.203C>T
  hgvsp: ENST00000564556.1:c.203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2617C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1515C>T
  hgvsp: ENST00000563630.1:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12486
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3878
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25985
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala560Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

16-2049874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049874
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049874
    reference: chr 16
allele count: 6
allele frequency: 1.30605137135394e-4
allele num: 45940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1511C>T
  hgvsp: ENSP00000455308.1:p.Pro504Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2613C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1765C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.199C>T
  hgvsp: ENSP00000456128.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1511C>T
  hgvsp: ENSP00000455882.1:p.Pro504Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1676C>T
  hgvsp: ENSP00000411409.1:p.Pro559Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1774C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15086
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12896
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro559Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

16-2049875-GGCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049875
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049872
    reference: chr 16
allele count: 1
allele frequency: 2.210140122883791e-5
allele num: 45246
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1672_1674delGGC
  hgvsp: ENSP00000411409.1:p.Gly558del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2609_2611delGGC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1507_1509delGGC
  hgvsp: ENSP00000455308.1:p.Gly503del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.195_197delGGC
  hgvsp: ENSP00000456128.1:p.Gly66del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1761_1763delGGC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1507_1509delGGC
  hgvsp: ENSP00000455882.1:p.Gly503del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1770_1772delGGC
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14944
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12852
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly558del
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GGCC
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-2049877-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049877
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049877
    reference: chr 16
allele count: 1
allele frequency: 2.37936613686114e-5
allele num: 42028
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1673G>C
  hgvsp: ENSP00000411409.1:p.Gly558Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1508G>C
  hgvsp: ENSP00000455882.1:p.Gly503Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1771G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.196G>C
  hgvsp: ENSP00000456128.1:p.Gly66Ala
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2610G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1762G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1508G>C
  hgvsp: ENSP00000455308.1:p.Gly503Ala
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24221
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12842
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly558Ala
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

16-2049877-CCGCCGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049877
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049871
    reference: chr 16
allele count: 3
allele frequency: 7.13809841058342e-5
allele num: 42028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.190_195delACGGCG
  hgvsp: ENSP00000456128.1:p.Asp64_Gly65del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1765_1770delACGGCG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1502_1507delACGGCG
  hgvsp: ENSP00000455882.1:p.Asp501_Gly502del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1667_1672delACGGCG
  hgvsp: ENSP00000411409.1:p.Asp556_Gly557del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1502_1507delACGGCG
  hgvsp: ENSP00000455308.1:p.Asp501_Gly502del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2604_2609delACGGCG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1756_1761delACGGCG
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24221
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp556_Gly557del
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: CCGCCGT
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

16-2049878-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049878
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049878
    reference: chr 16
allele count: 2
allele frequency: 4.729921483303377e-5
allele num: 42284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1770G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2609G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1672G>A
  hgvsp: ENSP00000411409.1:p.Gly558Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1507G>A
  hgvsp: ENSP00000455882.1:p.Gly503Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.195G>A
  hgvsp: ENSP00000456128.1:p.Gly66Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1507G>A
  hgvsp: ENSP00000455308.1:p.Gly503Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1761G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8747
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24293
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14487
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4970
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly558Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

16-2049878-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049878
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049877
    reference: chr 16
allele count: 2
allele frequency: 4.729921483303377e-5
allele num: 42284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2608delC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1506delC
  hgvsp: ENSP00000455308.1:p.Gly503AlafsTer8
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.194delC
  hgvsp: ENSP00000456128.1:p.Gly66AlafsTer8
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1671delC
  hgvsp: ENSP00000411409.1:p.Gly558AlafsTer8
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1506delC
  hgvsp: ENSP00000455882.1:p.Gly503AlafsTer8
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1769delC
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1760delC
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8747
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24293
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14487
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 12949
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4970
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22789
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly558AlafsTer8
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: CG
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

16-2049879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049879
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049879
    reference: chr 16
allele count: 17
allele frequency: 4.029390850912539e-4
allele num: 42190
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1671C>T
  hgvsp: ENST00000431526.1:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2608C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1506C>T
  hgvsp: ENST00000562103.1:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1506C>T
  hgvsp: ENST00000563630.1:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.194C>T
  hgvsp: ENST00000564556.1:c.194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1769C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1760C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14465
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24377
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23285
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly557Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-2049880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049880
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049880
    reference: chr 16
allele count: 2
allele frequency: 4.972897707494157e-5
allele num: 40218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.193G>A
  hgvsp: ENSP00000456128.1:p.Gly65Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2607G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1505G>A
  hgvsp: ENSP00000455308.1:p.Gly502Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1759G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1670G>A
  hgvsp: ENSP00000411409.1:p.Gly557Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1505G>A
  hgvsp: ENSP00000455882.1:p.Gly502Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1768G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24283
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12771
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly557Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

16-2049880-CCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049880
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049878
    reference: chr 16
allele count: 2
allele frequency: 4.972897707494157e-5
allele num: 40218
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1668_1669delCG
  hgvsp: ENSP00000411409.1:p.Asp556GlufsTer30
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1503_1504delCG
  hgvsp: ENSP00000455308.1:p.Asp501GlufsTer30
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1503_1504delCG
  hgvsp: ENSP00000455882.1:p.Asp501GlufsTer30
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1766_1767delCG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1757_1758delCG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.191_192delCG
  hgvsp: ENSP00000456128.1:p.Asp64GlufsTer30
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2605_2606delCG
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24283
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5597
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp556GlufsTer30
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: CCG
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

16-2049880-CCGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049880
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049877
    reference: chr 16
allele count: 1
allele frequency: 2.486448853747078e-5
allele num: 40218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.190_192delACG
  hgvsp: ENSP00000456128.1:p.Asp64del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1667_1669delACG
  hgvsp: ENSP00000411409.1:p.Asp556del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1756_1758delACG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1502_1504delACG
  hgvsp: ENSP00000455308.1:p.Asp501del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1765_1767delACG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2604_2606delACG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1502_1504delACG
  hgvsp: ENSP00000455882.1:p.Asp501del
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24283
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12771
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp556del
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: CCGT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

16-2049881-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049881
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049881
    reference: chr 16
allele count: 41
allele frequency: 1.016360932077343e-3
allele num: 40340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.192G>A
  hgvsp: ENSP00000456128.1:p.Gly65Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1669G>A
  hgvsp: ENSP00000411409.1:p.Gly557Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1504G>A
  hgvsp: ENSP00000455308.1:p.Gly502Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1504G>A
  hgvsp: ENSP00000455882.1:p.Gly502Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2606G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1767G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1758G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24284
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22198
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12870
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.25e1
  variant carriers: 4
hgvs: p.Gly557Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

16-2049882-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049882
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049882
    reference: chr 16
allele count: 291
allele frequency: 7.427258805513016e-3
allele num: 39180
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1668C>G
  hgvsp: ENSP00000411409.1:p.Asp556Glu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2605C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1503C>G
  hgvsp: ENSP00000455308.1:p.Asp501Glu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1766C>G
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.191C>G
  hgvsp: ENSP00000456128.1:p.Asp64Glu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1503C>G
  hgvsp: ENSP00000455882.1:p.Asp501Glu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1757C>G
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 26608
  bin: 7.5e0
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 19480
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 8648
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 6633
  bin: 2.5e0
  variant carriers: 2
hgvs: p.Asp556Glu
num of homozygotes: 8
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

16-2049882-G-GTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049882
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049885
    reference: chr 16
allele count: 6899
allele frequency: 1.760847371107708e-1
allele num: 39180
alternate allele: GTCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2602_2604dupGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1500_1502dupGGA
  hgvsp: ENSP00000455308.1:p.Glu500dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1763_1765dupGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.188_190dupGGA
  hgvsp: ENSP00000456128.1:p.Glu63dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1665_1667dupGGA
  hgvsp: ENSP00000411409.1:p.Glu555dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1500_1502dupGGA
  hgvsp: ENSP00000455882.1:p.Glu500dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1754_1756dupGGA
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 3460
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 2.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.75e1
  variant carriers: 805
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.5e0
  variant carriers: 699
genotype depth: GenotypeDepth
  all individuals: 26608
  bin: 7.5e0
  variant carriers: 5534
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 6633
  bin: 2.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 8648
  bin: 7.5e0
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.75e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 9383
  bin: 9.75e1
  variant carriers: 8728
genotype quality: GenotypeQuality
  all individuals: 19480
  bin: 2.25e1
  variant carriers: 327
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 6.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 7.75e1
  variant carriers: 461
hgvs: p.Glu555dup
num of homozygotes: 542
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-2049882-G-GTCCTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049882
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049888
    reference: chr 16
allele count: 5
allele frequency: 1.276161306789178e-4
allele num: 39180
alternate allele: GTCCTCC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1497_1502dupGGAGGA
  hgvsp: ENSP00000455308.1:p.Glu499_Glu500dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.185_190dupGGAGGA
  hgvsp: ENSP00000456128.1:p.Glu62_Glu63dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1497_1502dupGGAGGA
  hgvsp: ENSP00000455882.1:p.Glu499_Glu500dup
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1751_1756dupGGAGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1760_1765dupGGAGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2599_2604dupGGAGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1662_1667dupGGAGGA
  hgvsp: ENSP00000411409.1:p.Glu554_Glu555dup
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu554_Glu555dup
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

16-2049882-GTCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049882
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049879
    reference: chr 16
allele count: 266
allele frequency: 6.789178152118428e-3
allele num: 39180
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1500_1502delGGA
  hgvsp: ENSP00000455882.1:p.Glu500del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1754_1756delGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.188_190delGGA
  hgvsp: ENSP00000456128.1:p.Glu63del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1665_1667delGGA
  hgvsp: ENSP00000411409.1:p.Glu555del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1500_1502delGGA
  hgvsp: ENSP00000455308.1:p.Glu500del
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2602_2604delGGA
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1763_1765delGGA
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 26608
  bin: 7.5e0
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 6633
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 19480
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 1.75e1
  variant carriers: 8
hgvs: p.Glu555del
num of homozygotes: 6
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: GTCC
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

16-2049890-C-CCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049890
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049893
    reference: chr 16
allele count: 2
allele frequency: 5.131889561736631e-5
allele num: 38972
alternate allele: CCTT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.182_183insAAG
  hgvsp: ENSP00000456128.1:p.Glu61_Glu62insLys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1494_1495insAAG
  hgvsp: ENSP00000455882.1:p.Glu498_Glu499insLys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1659_1660insAAG
  hgvsp: ENSP00000411409.1:p.Glu553_Glu554insLys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1494_1495insAAG
  hgvsp: ENSP00000455308.1:p.Glu498_Glu499insLys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2596_2597insAAG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1757_1758insAAG
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1748_1749insAAG
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11491
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12289
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12651
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29750
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu553_Glu554insLys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

16-2049891-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049891
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049891
    reference: chr 16
allele count: 14
allele frequency: 3.614209004543577e-4
allele num: 38736
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1659G>C
  hgvsp: ENSP00000411409.1:p.Glu553Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.182G>C
  hgvsp: ENSP00000456128.1:p.Glu61Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2596G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1748G>C
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1494G>C
  hgvsp: ENSP00000455308.1:p.Glu498Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1494G>C
  hgvsp: ENSP00000455882.1:p.Glu498Asp
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1757G>C
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26923
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11410
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12842
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu553Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

16-2049893-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049893
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049893
    reference: chr 16
allele count: 75
allele frequency: 1.962015382200596e-3
allele num: 38226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1492G>A
  hgvsp: ENSP00000455308.1:p.Glu498Lys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1657G>A
  hgvsp: ENSP00000411409.1:p.Glu553Lys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.180G>A
  hgvsp: ENSP00000456128.1:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1755G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2594G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1746G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1492G>A
  hgvsp: ENSP00000455882.1:p.Glu498Lys
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26793
  bin: 7.5e0
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11251
  bin: 1.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 13177
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.75e1
  variant carriers: 2
hgvs: p.Glu553Lys
num of homozygotes: 1
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

16-2049910-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049910
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049910
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 29202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1475C>T
  hgvsp: ENSP00000455882.1:p.Pro492Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.163C>T
  hgvsp: ENSP00000456128.1:p.Pro55Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1475C>T
  hgvsp: ENSP00000455308.1:p.Pro492Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1640C>T
  hgvsp: ENSP00000411409.1:p.Pro547Leu
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1729C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000561787
  gene symbol: ZNF598
  hgvsc: ENST00000561787.1:n.771C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1738C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2577C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24597
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22672
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4305
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro547Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-2049912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049912
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049912
    reference: chr 16
allele count: 9
allele frequency: 3.191489361702127e-4
allele num: 28200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000561787
  gene symbol: ZNF598
  hgvsc: ENST00000561787.1:n.769C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1473C>T
  hgvsp: ENST00000563630.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1473C>T
  hgvsp: ENST00000562103.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1736C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.161C>T
  hgvsp: ENST00000564556.1:c.161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1638C>T
  hgvsp: ENST00000431526.1:c.1638C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2575C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1727C>T
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24475
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3611
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly546Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

16-2049914-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049914
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049914
    reference: chr 16
allele count: 2
allele frequency: 7.329766180458844e-5
allele num: 27286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.159G>A
  hgvsp: ENSP00000456128.1:p.Gly54Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1471G>A
  hgvsp: ENSP00000455308.1:p.Gly491Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1636G>A
  hgvsp: ENSP00000411409.1:p.Gly546Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1734G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1725G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1471G>A
  hgvsp: ENSP00000455882.1:p.Gly491Ser
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000561787
  gene symbol: ZNF598
  hgvsc: ENST00000561787.1:n.767G>A
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2573G>A
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24154
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7364
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19938
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20260
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly546Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS

16-2049915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2049915
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2049915
    reference: chr 16
allele count: 3
allele frequency: 1.171325940965173e-4
allele num: 25612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000456128
  ensembl transcript: ENST00000564556
  gene symbol: ZNF598
  hgvsc: ENST00000564556.1:c.158C>T
  hgvsp: ENST00000564556.1:c.158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455308
  ensembl transcript: ENST00000562103
  gene symbol: ZNF598
  hgvsc: ENST00000562103.1:c.1470C>T
  hgvsp: ENST00000562103.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000565396
  gene symbol: ZNF598
  hgvsc: ENST00000565396.1:n.2572C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000562988
  gene symbol: ZNF598
  hgvsc: ENST00000562988.1:n.1724C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000561787
  gene symbol: ZNF598
  hgvsc: ENST00000561787.1:n.766C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000455882
  ensembl transcript: ENST00000563630
  gene symbol: ZNF598
  hgvsc: ENST00000563630.1:c.1470C>T
  hgvsp: ENST00000563630.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167962
  ensembl transcript: ENST00000564824
  gene symbol: ZNF598
  hgvsc: ENST00000564824.1:n.1733C>T
  variant of: http://identifiers.org/hgnc/28079
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167962
  ensembl protein: ENSP00000411409
  ensembl transcript: ENST00000431526
  gene symbol: ZNF598
  hgvsc: ENST00000431526.1:c.1635C>T
  hgvsp: ENST00000431526.1:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28079
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6875
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23917
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly545Gly
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 5541
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35451
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5862
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.464268112370626e-4
allele num: 8116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11010
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.1e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

VQSLOD
type: SiteQuality
SIO_000300: -1.884e0

DP
type: SiteQuality
SIO_000300: 1.483714e6

FS
type: SiteQuality
SIO_000300: 1.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.607e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: -3.88e-1

GenotypeQuality
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36093
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1305
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.225874735400324e-5
allele num: 16062
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.524e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.117e0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

DP
type: SiteQuality
SIO_000300: 1.48347e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

VQSLOD
type: SiteQuality
SIO_000300: -2.79e0

QD
type: SiteQuality
SIO_000300: 1.574e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36429
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.67022982362373e-5
allele num: 59872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.48325e6

VQSLOD
type: SiteQuality
SIO_000300: -3.767e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.208e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.303e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 1.302e0

QD
type: SiteQuality
SIO_000300: 1.498e1

GenotypeQuality
all individuals: 847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.482774e6

FS
type: SiteQuality
SIO_000300: 1.075e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.029e0

GenotypeQuality
all individuals: 788
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36620
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.339567192091905e-5
allele num: 59888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.482774e6

QD
type: SiteQuality
SIO_000300: 1.094e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 1.075e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.029e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5405
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59840
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.58732212160414e-4
allele num: 7730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.395e0

QD
type: SiteQuality
SIO_000300: 1.065e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.154e0

VQSLOD
type: SiteQuality
SIO_000300: 6.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.481583e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-1

GenotypeQuality
all individuals: 1410
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5753
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.705334093271198e-5
allele num: 59654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

DP
type: SiteQuality
SIO_000300: 1.475666e6

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

GenotypeQuality
all individuals: 507
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 972
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.678077594307961e-5
allele num: 59592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10942
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.471891e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.408e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 3.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.433e0

GenotypeQuality
all individuals: 1083
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.688789813219847e-5
allele num: 59214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 1.457857e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 9.26e0

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

FS
type: SiteQuality
SIO_000300: 1.243e0

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2217
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1019
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
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variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4964
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 1.172180255274811e-3
allele num: 7678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59254
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-1

FS
type: SiteQuality
SIO_000300: 1.129e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.458509e6

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
all individuals: 1095
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
all individuals: 4754
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7602
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.534211860111505e-4
allele num: 15784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10764
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

FS
type: SiteQuality
SIO_000300: 4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

DP
type: SiteQuality
SIO_000300: 1.44456e6

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeQuality
all individuals: 905
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1096
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35755
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variant carriers: 0

GenotypeQuality
all individuals: 738
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variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 1

GenotypeQuality
all individuals: 545
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GenotypeQuality
all individuals: 1103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4650
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5608
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.979414093428345e-3
allele num: 7578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

South Asian
type: Population
allele count: 56
allele frequency: 3.555104113763332e-3
allele num: 15752
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.328358208955224e-5
allele num: 10720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58710
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

DP
type: SiteQuality
SIO_000300: 1.443215e6

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 1.114e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1104
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variant carriers: 0

GenotypeQuality
all individuals: 35839
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variant carriers: 0

GenotypeQuality
all individuals: 931
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variant carriers: 0

GenotypeQuality
all individuals: 2186
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GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
all individuals: 1083
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variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.704855428259683e-5
allele num: 58656
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

DP
type: SiteQuality
SIO_000300: 1.438008e6

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 2.551e1

GenotypeQuality
all individuals: 4611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 1141
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GenotypeQuality
all individuals: 2199
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variant carriers: 19

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 1067
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GenotypeQuality
all individuals: 911
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.417868617130357e-4
allele num: 58516
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10666
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.362942224484602e-5
allele num: 15716
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

DP
type: SiteQuality
SIO_000300: 1.432258e6

QD
type: SiteQuality
SIO_000300: 1.172e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

GenotypeQuality
all individuals: 450
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
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variant carriers: 0

GenotypeQuality
all individuals: 81
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2182
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variant carriers: 2

GenotypeQuality
all individuals: 813
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1157
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.432533553015481e-5
allele num: 58266
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

QD
type: SiteQuality
SIO_000300: 2.127e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.423069e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
all individuals: 4250
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variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 1261
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GenotypeQuality
all individuals: 1081
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variant carriers: 0

GenotypeQuality
all individuals: 452
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GenotypeQuality
all individuals: 1311
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GenotypeQuality
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GenotypeQuality
all individuals: 826
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GenotypeQuality
all individuals: 171
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variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 34415
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.458532198934772e-5
allele num: 57828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.494e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

MQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 1.406467e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 1356
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GenotypeQuality
all individuals: 490
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GenotypeQuality
all individuals: 1511
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GenotypeQuality
all individuals: 60
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GenotypeQuality
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GenotypeQuality
all individuals: 782
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GenotypeQuality
all individuals: 911
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variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.483470930435086e-5
allele num: 57414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15468
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.389626e6

FS
type: SiteQuality
SIO_000300: 7.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.097e0

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.14e-1

GenotypeQuality
all individuals: 94
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.30684788290643e-4
allele num: 7652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.24e0

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 1.372735e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.288e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 859
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 732
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variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15346
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.311647429171039e-4
allele num: 7624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5262
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

QD
type: SiteQuality
SIO_000300: 1.151e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

FS
type: SiteQuality
SIO_000300: 2.103e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

DP
type: SiteQuality
SIO_000300: 1.362218e6

GenotypeQuality
all individuals: 11072
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3894
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56534
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.381597126277977e-4
allele num: 7238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.002e0

FS
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 1.357196e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

QD
type: SiteQuality
SIO_000300: 6.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e0

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.545596369309318e-5
allele num: 56408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.206e0

QD
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

DP
type: SiteQuality
SIO_000300: 1.351548e6

GenotypeQuality
all individuals: 2176
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 289
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3828
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variant carriers: 0

GenotypeQuality
all individuals: 415
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variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56368
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

FS
type: SiteQuality
SIO_000300: 4.348e0

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

DP
type: SiteQuality
SIO_000300: 1.345853e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.186e1

GenotypeQuality
all individuals: 184
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 3745
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 658
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variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.783103313005956e-5
allele num: 56082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0657e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.304e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 1.335172e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.909e0

QD
type: SiteQuality
SIO_000300: 1.121e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 692
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3745
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
all individuals: 797
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.93941793704217e-4
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.566206626011911e-5
allele num: 56082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.577216521967904e-5
allele num: 15204
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.304e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

FS
type: SiteQuality
SIO_000300: 1.0657e1

DP
type: SiteQuality
SIO_000300: 1.335172e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.909e0

GenotypeQuality
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20123
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.597444089456869e-4
allele num: 6260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

FS
type: SiteQuality
SIO_000300: 4.859e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

DP
type: SiteQuality
SIO_000300: 1.148116e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 1.365e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 630
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 633
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.051191651389085e-5
allele num: 14182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.755e0

DP
type: SiteQuality
SIO_000300: 1.09523e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 276
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GenotypeQuality
all individuals: 709
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GenotypeQuality
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GenotypeQuality
all individuals: 3605
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variant carriers: 0

GenotypeQuality
all individuals: 23745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
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GenotypeQuality
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GenotypeQuality
all individuals: 2085
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2171
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.244864932154861e-4
allele num: 48198
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14040
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

DP
type: SiteQuality
SIO_000300: 1.069648e6

QD
type: SiteQuality
SIO_000300: 1.188e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48198
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.122507122507122e-5
allele num: 14040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.069648e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

QD
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SIO_000300: 1.188e1

VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.126211940806259e-5
allele num: 47032
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.834e-1

DP
type: SiteQuality
SIO_000300: 1.040716e6

FS
type: SiteQuality
SIO_000300: 4.546e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e0

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.222302470027445e-5
allele num: 13846
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.25e-1

FS
type: SiteQuality
SIO_000300: 3.78e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.032472e6

GenotypeQuality
all individuals: 787
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.711303157354325e-4
allele num: 46748
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

DP
type: SiteQuality
SIO_000300: 1.032472e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

FS
type: SiteQuality
SIO_000300: 3.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.25e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

GenotypeQuality
all individuals: 935
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1249
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.188279574598451e-5
allele num: 45698
num of homozygotes: 0

Latino
type: Population
allele count: 60
allele frequency: 7.381889763779527e-3
allele num: 8128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

East Asian
type: Population
allele count: 61
allele frequency: 1.061608075182736e-2
allele num: 5746
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 6.566467240624544e-4
allele num: 13706
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 1.007427e6

QD
type: SiteQuality
SIO_000300: 1.44e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

GenotypeQuality
all individuals: 2160
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.821493624772313e-4
allele num: 5490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.216606818282573e-5
allele num: 45114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3826
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.566e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.02e-1

DP
type: SiteQuality
SIO_000300: 9.97409e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5436
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.548348949331393e-5
allele num: 43972
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.306e1

MQRankSum
type: SiteQuality
SIO_000300: -6.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.823e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.78916e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.643819076808767e-5
allele num: 43068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5306
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South Asian
type: Population
allele count: 7
allele frequency: 5.247376311844077e-4
allele num: 13340
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

FS
type: SiteQuality
SIO_000300: 5.913e0

QD
type: SiteQuality
SIO_000300: 1.29e1

VQSLOD
type: SiteQuality
SIO_000300: 7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.801e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

DP
type: SiteQuality
SIO_000300: 9.62836e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1154
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8424
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.328288707799767e-5
allele num: 42950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 548
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.506380423359856e-5
allele num: 13322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.746e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

FS
type: SiteQuality
SIO_000300: 3.574e0

DP
type: SiteQuality
SIO_000300: 9.61547e5

VQSLOD
type: SiteQuality
SIO_000300: -2.021e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.493e0

QD
type: SiteQuality
SIO_000300: 3.243e1

GenotypeQuality
all individuals: 1133
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3634
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.389486260454003e-5
allele num: 41850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.024e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.47944e5

GenotypeQuality
all individuals: 2163
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3066
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3985
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3700
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1480
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 4.131093362709997e-4
allele num: 7262
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.055150040551501e-4
allele num: 4932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.206738427378481e-4
allele num: 41434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5016
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

DP
type: SiteQuality
SIO_000300: 9.41127e5

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 2.194e0

QD
type: SiteQuality
SIO_000300: 1.122e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.24e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

GenotypeQuality
all individuals: 1446
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25686
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3675
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2186
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 115
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 260
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 2

Latino
type: Population
allele count: 1
allele frequency: 1.374759417102007e-4
allele num: 7274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3340
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 7.093635995135792e-3
allele num: 4934
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

FS
type: SiteQuality
SIO_000300: 5.89e-1

DP
type: SiteQuality
SIO_000300: 9.39092e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

QD
type: SiteQuality
SIO_000300: 1.148e1

GenotypeQuality
all individuals: 251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3785
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13060
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3324
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.049180327868852e-4
allele num: 4880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41112
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

FS
type: SiteQuality
SIO_000300: 1.245e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.217e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 9.34751e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

QD
type: SiteQuality
SIO_000300: 1.071e1

GenotypeQuality
all individuals: 26162
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.040816326530612e-4
allele num: 4900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.458452158520995e-5
allele num: 40676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3248
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.15e0

DP
type: SiteQuality
SIO_000300: 9.27018e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 1136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2155
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4462
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7081
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12878
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.224757076468103e-4
allele num: 4734
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 2.081598667776853e-4
allele num: 4804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 2.765e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.022e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 9.23388e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.095557418273261e-4
allele num: 4772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.01378791677112e-5
allele num: 39890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

MQ
type: SiteQuality
SIO_000300: 5.845e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.615e0

DP
type: SiteQuality
SIO_000300: 9.2043e5

VQSLOD
type: SiteQuality
SIO_000300: -1.561e0

GenotypeQuality
all individuals: 2054
bin: 3.25e1
variant carriers: 239

GenotypeQuality
all individuals: 2216
bin: 2.75e1
variant carriers: 188

GenotypeQuality
all individuals: 349
bin: 9.25e1
variant carriers: 337

GenotypeQuality
all individuals: 1729
bin: 2.5e0
variant carriers: 45

GenotypeQuality
all individuals: 22816
bin: 2.25e1
variant carriers: 244

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 243

GenotypeQuality
all individuals: 554
bin: 5.25e1
variant carriers: 311

GenotypeQuality
all individuals: 6575
bin: 6.25e1
variant carriers: 274

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 356

GenotypeQuality
all individuals: 1120
bin: 3.75e1
variant carriers: 274

GenotypeQuality
all individuals: 1083
bin: 1.75e1
variant carriers: 185

European (Finnish)
type: Population
allele count: 885
allele frequency: 2.849323889246619e-1
allele num: 3106
num of homozygotes: 97

South Asian
type: Population
allele count: 3608
allele frequency: 2.777093596059113e-1
allele num: 12992
num of homozygotes: 500

East Asian
type: Population
allele count: 259
allele frequency: 5.487288135593221e-2
allele num: 4720
num of homozygotes: 5

African
type: Population
allele count: 203
allele frequency: 4.322827938671209e-2
allele num: 4696
num of homozygotes: 4

Other
type: Population
allele count: 112
allele frequency: 2.295081967213115e-1
allele num: 488
num of homozygotes: 7

Latino
type: Population
allele count: 1902
allele frequency: 2.789674391317102e-1
allele num: 6818
num of homozygotes: 194

European (Non-Finnish)
type: Population
allele count: 9140
allele frequency: 2.297059562704197e-1
allele num: 39790
num of homozygotes: 768

QD
type: SiteQuality
SIO_000300: 1.483e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

DP
type: SiteQuality
SIO_000300: 9.8824e5

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e-1

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6424
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36440
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 8.48508e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 2.367e0

QD
type: SiteQuality
SIO_000300: 1.303e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

GenotypeQuality
all individuals: 2360
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32409
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
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GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34716
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.386634844868735e-4
allele num: 4190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11942
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

DP
type: SiteQuality
SIO_000300: 8.2816e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

FS
type: SiteQuality
SIO_000300: 1.018e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 1.205400192864031e-3
allele num: 4148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11830
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2340
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.155e1

DP
type: SiteQuality
SIO_000300: 8.213e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 2.177e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11046
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.836074872376631e-4
allele num: 3526
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 5.26e0

MQRankSum
type: SiteQuality
SIO_000300: -1.065e0

FS
type: SiteQuality
SIO_000300: 4.301e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.963e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.652e0

DP
type: SiteQuality
SIO_000300: 7.85476e5

MQ
type: SiteQuality
SIO_000300: 5.674e1

GenotypeQuality
all individuals: 3842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 9.337068160597572e-5
allele num: 10710
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.379819133745835e-4
allele num: 4202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27278
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -8.86e-1

FS
type: SiteQuality
SIO_000300: 5.022e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.345e0

MQ
type: SiteQuality
SIO_000300: 5.748e1

DP
type: SiteQuality
SIO_000300: 7.73763e5

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
all individuals: 846
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4138
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.865329512893983e-4
allele num: 3490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3254
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10686
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.72272e5

FS
type: SiteQuality
SIO_000300: 1.913e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.122e0

QD
type: SiteQuality
SIO_000300: 1.361e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeQuality
all individuals: 24478
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 34
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.746588693957115e-5
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.638941243956404e-4
allele num: 24406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3546
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.455425017277125e-4
allele num: 2894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.75e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 7.32e-1

DP
type: SiteQuality
SIO_000300: 7.56872e5

QD
type: SiteQuality
SIO_000300: 1.132e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 30
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3224
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.828975820719482e-5
allele num: 10174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1244
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.65e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 4.34e0

DP
type: SiteQuality
SIO_000300: 7.53309e5

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.520386945122503e-5
allele num: 22122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2590
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1082
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
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FS
type: SiteQuality
SIO_000300: 3.095e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.83e-2

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.12e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.45069e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.3003300330033e-4
allele num: 3030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.040773890245005e-5
allele num: 22122
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.74e-1

FS
type: SiteQuality
SIO_000300: 3.095e0

QD
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.45069e5

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 675
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1485
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variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 1.009081735620585e-4
allele num: 9910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.49034575662326e-5
allele num: 22270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 7.94e0

DP
type: SiteQuality
SIO_000300: 7.44614e5

MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

FS
type: SiteQuality
SIO_000300: 3.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 3418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1088
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.49034575662326e-5
allele num: 22270
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.234152652005175e-4
allele num: 3092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3046
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

QD
type: SiteQuality
SIO_000300: 7.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.763e1

FS
type: SiteQuality
SIO_000300: 3.769e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

DP
type: SiteQuality
SIO_000300: 7.44614e5

GenotypeQuality
all individuals: 3834
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 17

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 7.654899135446686e-4
allele num: 22208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.44099e5

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.81e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

GenotypeQuality
all individuals: 2252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2462
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.05761316872428e-4
allele num: 9720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20972
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.39957e5

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 7.202e0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.35e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.517e-1

GenotypeQuality
all individuals: 21812
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12771
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 82
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 867
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variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2942
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.50140056022409e-4
allele num: 2856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.768262445164982e-5
allele num: 20972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.35e-2

DP
type: SiteQuality
SIO_000300: 7.39957e5

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

FS
type: SiteQuality
SIO_000300: 7.202e0

VQSLOD
type: SiteQuality
SIO_000300: -4.517e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5597
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 91
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 3.399048266485384e-4
allele num: 2942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.35e-2

MQ
type: SiteQuality
SIO_000300: 5.81e1

FS
type: SiteQuality
SIO_000300: 7.202e0

VQSLOD
type: SiteQuality
SIO_000300: -4.517e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

DP
type: SiteQuality
SIO_000300: 7.39957e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 163
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1944
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
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GenotypeQuality
all individuals: 2239
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 856
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GenotypeQuality
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GenotypeQuality
all individuals: 1509
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 175
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variant carriers: 2

GenotypeQuality
all individuals: 5382
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3846
bin: 1.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.571428571428571e-3
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.020408163265306e-3
allele num: 980
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 39
allele frequency: 1.847640704945992e-3
allele num: 21108
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.644e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.336e1

DP
type: SiteQuality
SIO_000300: 7.40324e5

GenotypeQuality
all individuals: 2089
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 740
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 352
bin: 8.25e1
variant carriers: 17

GenotypeQuality
all individuals: 723
bin: 6.75e1
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GenotypeQuality
all individuals: 600
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2163
bin: 1.75e1
variant carriers: 19

GenotypeQuality
all individuals: 3348
bin: 6.25e1
variant carriers: 12

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 20

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 428
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 9383
bin: 9.75e1
variant carriers: 304

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 3.964321110009911e-4
allele num: 20180
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 7.947477539737388e-3
allele num: 2894
num of homozygotes: 0

African
type: Population
allele count: 257
allele frequency: 9.036568213783404e-2
allele num: 2844
num of homozygotes: 8

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.092783505154639e-4
allele num: 9700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 2.11e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 1.838e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

MQ
type: SiteQuality
SIO_000300: 5.794e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 6.83227e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 428
bin: 7.25e1
variant carriers: 250

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 70

GenotypeQuality
all individuals: 3348
bin: 6.25e1
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GenotypeQuality
all individuals: 2089
bin: 1.25e1
variant carriers: 429

GenotypeQuality
all individuals: 2163
bin: 1.75e1
variant carriers: 346

GenotypeQuality
all individuals: 352
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variant carriers: 286

GenotypeQuality
all individuals: 177
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GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 73

GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 1408
bin: 3.25e1
variant carriers: 422

GenotypeQuality
all individuals: 1756
bin: 2.75e1
variant carriers: 412

African
type: Population
allele count: 90
allele frequency: 3.164556962025317e-2
allele num: 2844
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 3589
allele frequency: 1.778493557978196e-1
allele num: 20180
num of homozygotes: 224

East Asian
type: Population
allele count: 94
allele frequency: 4.058721934369603e-2
allele num: 2316
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 200
allele frequency: 2.053388090349076e-1
allele num: 974
num of homozygotes: 21

Latino
type: Population
allele count: 643
allele frequency: 2.221838286109191e-1
allele num: 2894
num of homozygotes: 59

Other
type: Population
allele count: 52
allele frequency: 1.911764705882353e-1
allele num: 272
num of homozygotes: 2

South Asian
type: Population
allele count: 2231
allele frequency: 2.3e-1
allele num: 9700
num of homozygotes: 232

FS
type: SiteQuality
SIO_000300: 1.838e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 2.11e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.794e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 6.83227e5

GenotypeQuality
all individuals: 6633
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8648
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GenotypeQuality
all individuals: 600
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GenotypeQuality
all individuals: 723
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GenotypeQuality
all individuals: 109
bin: 9.25e1
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GenotypeQuality
all individuals: 138
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GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 2089
bin: 1.25e1
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GenotypeQuality
all individuals: 9383
bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.955401387512388e-5
allele num: 20180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.123711340206186e-4
allele num: 9700
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 2.11e1

FS
type: SiteQuality
SIO_000300: 1.838e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.794e1

DP
type: SiteQuality
SIO_000300: 6.83227e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8648
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 9383
bin: 9.75e1
variant carriers: 370

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 723
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 352
bin: 8.25e1
variant carriers: 10

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 428
bin: 7.25e1
variant carriers: 17

GenotypeQuality
all individuals: 600
bin: 7.75e1
variant carriers: 16

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 6

East Asian
type: Population
allele count: 162
allele frequency: 6.994818652849741e-2
allele num: 2316
num of homozygotes: 6

South Asian
type: Population
allele count: 15
allele frequency: 1.54639175257732e-3
allele num: 9700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 4.955401387512388e-4
allele num: 20180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 1.102941176470588e-2
allele num: 272
num of homozygotes: 0

Latino
type: Population
allele count: 75
allele frequency: 2.591568762957844e-2
allele num: 2894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.516174402250352e-4
allele num: 2844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 1.838e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 2.11e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.794e1

DP
type: SiteQuality
SIO_000300: 6.83227e5

GenotypeQuality
all individuals: 1872
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.94266508501384e-5
allele num: 20232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 970
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.64963503649635e-3
allele num: 274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2222
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.58e-2

FS
type: SiteQuality
SIO_000300: 1.657e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.829e1

DP
type: SiteQuality
SIO_000300: 5.799e5

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4928
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 30
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2087
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 228
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1034
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2200
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 5.038759689922481e-3
allele num: 2580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20064
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.01667344448963e-4
allele num: 9836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

QD
type: SiteQuality
SIO_000300: 1.042e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.58e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.78161e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 29643
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2323
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 664
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1029
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4912
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 297
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 208
bin: 9.75e1
variant carriers: 69

GenotypeQuality
all individuals: 1811
bin: 2.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2134
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 2.167630057803468e-3
allele num: 2768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 948
num of homozygotes: 0

African
type: Population
allele count: 69
allele frequency: 2.746815286624204e-2
allele num: 2512
num of homozygotes: 1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

FS
type: SiteQuality
SIO_000300: 6.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.257e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

DP
type: SiteQuality
SIO_000300: 5.7423e5

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 18811
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1778
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.85e-2

DP
type: SiteQuality
SIO_000300: 5.00632e5

VQSLOD
type: SiteQuality
SIO_000300: -1.134e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.688e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21510
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 6.579909343471268e-4
allele num: 13678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 4.93994e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.98e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.453e0

QD
type: SiteQuality
SIO_000300: 9.9e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19865
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.524390243902439e-4
allele num: 13120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.08e-2

DP
type: SiteQuality
SIO_000300: 4.86424e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.288e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0