14-56104072-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104072
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104072
    reference: chr 14
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1706T>G
  hgvsp: ENSP00000391964.2:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1706T>G
  hgvsp: ENSP00000388807.1:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1706T>G
  hgvsp: ENSP00000378725.3:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1706T>G
  hgvsp: ENSP00000432149.1:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1706T>G
  hgvsp: ENSP00000378720.3:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1706T>G
  hgvsp: ENSP00000394992.2:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1706T>G
  hgvsp: ENSP00000378719.1:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1706T>G
  hgvsp: ENSP00000378722.1:p.Met569Arg
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33141
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4412
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6120
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met569Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

14-56104074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104074
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104074
    reference: chr 14
allele count: 1
allele frequency: 8.360924383799873e-6
allele num: 119604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1708C>T
  hgvsp: ENSP00000391964.2:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1708C>T
  hgvsp: ENSP00000378720.3:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1708C>T
  hgvsp: ENSP00000378719.1:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1708C>T
  hgvsp: ENSP00000378725.3:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1708C>T
  hgvsp: ENSP00000378722.1:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1708C>T
  hgvsp: ENSP00000394992.2:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1708C>T
  hgvsp: ENSP00000432149.1:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1708C>T
  hgvsp: ENSP00000388807.1:p.Gln570Ter
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36689
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln570Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

14-56104075-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104075
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104075
    reference: chr 14
allele count: 1
allele frequency: 8.373105584861425e-6
allele num: 119430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1709A>G
  hgvsp: ENSP00000391964.2:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1709A>G
  hgvsp: ENSP00000432149.1:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1709A>G
  hgvsp: ENSP00000378719.1:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1709A>G
  hgvsp: ENSP00000378720.3:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1709A>G
  hgvsp: ENSP00000388807.1:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1709A>G
  hgvsp: ENSP00000378725.3:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1709A>G
  hgvsp: ENSP00000394992.2:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1709A>G
  hgvsp: ENSP00000378722.1:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4681
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30958
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln570Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-56104077-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104077
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104077
    reference: chr 14
allele count: 1
allele frequency: 8.396164631996104e-6
allele num: 119102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1711G>T
  hgvsp: ENSP00000391964.2:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1711G>T
  hgvsp: ENSP00000394992.2:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1711G>T
  hgvsp: ENSP00000378722.1:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1711G>T
  hgvsp: ENSP00000378720.3:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1711G>T
  hgvsp: ENSP00000378719.1:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1711G>T
  hgvsp: ENSP00000432149.1:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1711G>T
  hgvsp: ENSP00000388807.1:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1711G>T
  hgvsp: ENSP00000378725.3:p.Val571Phe
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val571Phe
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

14-56104085-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104085
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104086
    reference: chr 14
allele count: 1
allele frequency: 8.670169415110372e-6
allele num: 115338
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+9dupT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1716+9dupT
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

14-56104089-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104089
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104089
    reference: chr 14
allele count: 4
allele frequency: 3.567542498350012e-5
allele num: 112122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+7T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17500
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1716+7T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-56104089-TTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104089
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104086
    reference: chr 14
allele count: 2
allele frequency: 1.783771249175006e-5
allele num: 112122
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+13_1716+15delCTT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1716+13_1716+15delCTT
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: TTTC
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

14-56104092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104092
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104092
    reference: chr 14
allele count: 5
allele frequency: 4.9573666468372e-5
allele num: 100860
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+10C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10988
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15463
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3631
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4713
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

14-56104095-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104096
    reference: chr 14
allele count: 2320
allele frequency: 3.89274807879459e-2
allele num: 59598
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+26dupT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 1.75e1
  variant carriers: 1051
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 7.5e0
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 691
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 1.25e1
  variant carriers: 859
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 3.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 17733
  bin: 2.5e0
  variant carriers: 221
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 221
genotype quality: GenotypeQuality
  all individuals: 3129
  bin: 9.75e1
  variant carriers: 312
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 1.75e1
  variant carriers: 271
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 5.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 1.25e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 230
num of homozygotes: 1
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

14-56104095-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104094
    reference: chr 14
allele count: 11397
allele frequency: 1.912312493707843e-1
allele num: 59598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+26delT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 1.25e1
  variant carriers: 2656
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 1.75e1
  variant carriers: 3891
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 7.5e0
  variant carriers: 1093
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 3315
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 3.25e1
  variant carriers: 622
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 1634
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.75e1
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 17733
  bin: 2.5e0
  variant carriers: 524
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.75e1
  variant carriers: 422
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 876
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.75e1
  variant carriers: 316
genotype quality: GenotypeQuality
  all individuals: 4354
  bin: 7.5e0
  variant carriers: 582
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 369
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 5.75e1
  variant carriers: 773
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 896
num of homozygotes: 3
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: CT
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

14-56104095-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104093
    reference: chr 14
allele count: 144
allele frequency: 2.416188462700091e-3
allele num: 59598
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+25_1716+26delTT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 7.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4354
  bin: 7.5e0
  variant carriers: 9
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: CTT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-56104095-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104097
    reference: chr 14
allele count: 16
allele frequency: 2.684653847444545e-4
allele num: 59598
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+25_1716+26dupTT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17733
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6723
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

14-56104095-CTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104092
    reference: chr 14
allele count: 4
allele frequency: 6.711634618611363e-5
allele num: 59598
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4354
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6723
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17733
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3417
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3129
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 438
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6224
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.647446457990115e-4
  allele num: 6070
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3782
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CTTT
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

14-56104096-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104096
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104096
    reference: chr 14
allele count: 3
allele frequency: 1.082641645615301e-4
allele num: 27710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+14T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16245
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-56104098-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104098
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104098
    reference: chr 14
allele count: 2
allele frequency: 2.060496167477128e-5
allele num: 97064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+16T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14753
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

14-56104100-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104100
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104100
    reference: chr 14
allele count: 1
allele frequency: 1.006420965761559e-5
allele num: 99362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+18T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4783
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: QD

14-56104107-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104107
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104107
    reference: chr 14
allele count: 59
allele frequency: 6.461504763990801e-4
allele num: 91310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+25T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17788
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5791
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8235
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

14-56104107-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104107
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
allele count: 2
allele frequency: 2.190340597962983e-5
allele num: 91310
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+25_1716+26insA
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17788
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

14-56104108-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
allele count: 7075
allele frequency: 9.058666871526977e-2
allele num: 78102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+26T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.75e1
  variant carriers: 423
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 1.25e1
  variant carriers: 2648
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 1.75e1
  variant carriers: 2125
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 7.5e0
  variant carriers: 1819
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.5e0
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 2.25e1
  variant carriers: 1097
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 227
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 1.75e1
  variant carriers: 129
genotype quality: GenotypeQuality
  all individuals: 1920
  bin: 1.25e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 14823
  bin: 2.25e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 244
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 204
genotype quality: GenotypeQuality
  all individuals: 4465
  bin: 7.5e0
  variant carriers: 122
num of homozygotes: 204
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

14-56104108-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104109
    reference: chr 14
allele count: 59
allele frequency: 7.554223963534864e-4
allele num: 78102
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+33dupA
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 1.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 7.5e0
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5500
  bin: 2.5e0
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 3.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4465
  bin: 7.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 5.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 24
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

14-56104108-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104107
    reference: chr 14
allele count: 30
allele frequency: 3.841130828916033e-4
allele num: 78102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+33delA
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5500
  bin: 2.5e0
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4124
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1920
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4465
  bin: 7.5e0
  variant carriers: 7
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: TA
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

14-56104108-T-TAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104108
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104110
    reference: chr 14
allele count: 3
allele frequency: 3.841130828916033e-5
allele num: 78102
alternate allele: TAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+32_1716+33dupAA
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19305
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4124
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-56104109-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104109
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104109
    reference: chr 14
allele count: 189
allele frequency: 2.496499616939212e-3
allele num: 75706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+27A>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 1.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10998
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 20759
  bin: 1.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4480
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4756
  bin: 2.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.25e1
  variant carriers: 9
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

14-56104117-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104117
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104117
    reference: chr 14
allele count: 3
allele frequency: 3.996376618532531e-5
allele num: 75068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+35A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14734
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20258
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3855
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18546
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

14-56104122-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104122
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104122
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 72192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+40T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16268
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5331
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

14-56104128-C-CAAAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104128
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104132
    reference: chr 14
allele count: 1
allele frequency: 1.47597118904239e-5
allele num: 67752
alternate allele: CAAAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+46_1716+47insAAAT
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17503
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6007
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14223
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-56104131-ATTAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104131
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104127
    reference: chr 14
allele count: 1
allele frequency: 1.477366741519915e-5
allele num: 67688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+50_1716+53delTTAG
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17413
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6655
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: ATTAG
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

14-56104132-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104132
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104132
    reference: chr 14
allele count: 7
allele frequency: 1.038052021235579e-4
allele num: 67434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1716+50T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17335
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13980
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4220
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

14-56104448-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104448
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104448
    reference: chr 14
allele count: 1
allele frequency: 8.327504080476999e-6
allele num: 120084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1717-49G>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-56104462-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104462
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104462
    reference: chr 14
allele count: 1
allele frequency: 8.313795912937929e-6
allele num: 120282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1717-35A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-56104482-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104481
    reference: chr 14
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1717-14delG
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: TG
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

14-56104486-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104486
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104486
    reference: chr 14
allele count: 2
allele frequency: 1.656424442199069e-5
allele num: 120742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1717-11A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

14-56104514-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104514
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104514
    reference: chr 14
allele count: 5
allele frequency: 4.125344466262933e-5
allele num: 121202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1734T>C
  hgvsp: ENST00000395311.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1734T>C
  hgvsp: ENST00000395308.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1734T>C
  hgvsp: ENST00000459737.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1734T>C
  hgvsp: ENST00000413890.2:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1734T>C
  hgvsp: ENST00000416613.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1734T>C
  hgvsp: ENST00000395309.3:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1734T>C
  hgvsp: ENST00000395314.3:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1734T>C
  hgvsp: ENST00000438792.2:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn578Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

14-56104517-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104517
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104517
    reference: chr 14
allele count: 4
allele frequency: 3.299676631690094e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1737G>T
  hgvsp: ENSP00000378722.1:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1737G>T
  hgvsp: ENSP00000378725.3:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1737G>T
  hgvsp: ENSP00000388807.1:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1737G>T
  hgvsp: ENSP00000394992.2:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1737G>T
  hgvsp: ENSP00000378720.3:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1737G>T
  hgvsp: ENSP00000432149.1:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1737G>T
  hgvsp: ENSP00000391964.2:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1737G>T
  hgvsp: ENSP00000378719.1:p.Glu579Asp
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24826
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu579Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

14-56104527-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104527
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104527
    reference: chr 14
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1747G>T
  hgvsp: ENSP00000394992.2:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1747G>T
  hgvsp: ENSP00000378725.3:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1747G>T
  hgvsp: ENSP00000378720.3:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1747G>T
  hgvsp: ENSP00000378719.1:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1747G>T
  hgvsp: ENSP00000432149.1:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1747G>T
  hgvsp: ENSP00000378722.1:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1747G>T
  hgvsp: ENSP00000388807.1:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1747G>T
  hgvsp: ENSP00000391964.2:p.Ala583Ser
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala583Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

14-56104530-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104530
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104530
    reference: chr 14
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1750C>G
  hgvsp: ENSP00000378719.1:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1750C>G
  hgvsp: ENSP00000378725.3:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1750C>G
  hgvsp: ENSP00000394992.2:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1750C>G
  hgvsp: ENSP00000391964.2:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1750C>G
  hgvsp: ENSP00000378722.1:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1750C>G
  hgvsp: ENSP00000378720.3:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1750C>G
  hgvsp: ENSP00000388807.1:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1750C>G
  hgvsp: ENSP00000432149.1:p.Gln584Glu
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24825
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln584Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

14-56104533-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104533
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104533
    reference: chr 14
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1753A>T
  hgvsp: ENSP00000394992.2:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1753A>T
  hgvsp: ENSP00000378719.1:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1753A>T
  hgvsp: ENSP00000388807.1:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1753A>T
  hgvsp: ENSP00000432149.1:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1753A>T
  hgvsp: ENSP00000378722.1:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1753A>T
  hgvsp: ENSP00000391964.2:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1753A>T
  hgvsp: ENSP00000378725.3:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1753A>T
  hgvsp: ENSP00000378720.3:p.Ile585Phe
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile585Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-56104544-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104544
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104544
    reference: chr 14
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1764C>A
  hgvsp: ENSP00000378720.3:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1764C>A
  hgvsp: ENSP00000394992.2:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1764C>A
  hgvsp: ENSP00000378725.3:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1764C>A
  hgvsp: ENSP00000378719.1:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1764C>A
  hgvsp: ENSP00000378722.1:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1764C>A
  hgvsp: ENSP00000391964.2:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1764C>A
  hgvsp: ENSP00000432149.1:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1764C>A
  hgvsp: ENSP00000388807.1:p.Phe588Leu
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe588Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-56104545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104545
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104545
    reference: chr 14
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1765C>T
  hgvsp: ENSP00000394992.2:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1765C>T
  hgvsp: ENSP00000378719.1:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1765C>T
  hgvsp: ENSP00000391964.2:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1765C>T
  hgvsp: ENSP00000388807.1:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1765C>T
  hgvsp: ENSP00000378725.3:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1765C>T
  hgvsp: ENSP00000378720.3:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1765C>T
  hgvsp: ENSP00000432149.1:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1765C>T
  hgvsp: ENSP00000378722.1:p.His589Tyr
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24822
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His589Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

14-56104552-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104552
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104552
    reference: chr 14
allele count: 2
allele frequency: 1.650219479190732e-5
allele num: 121196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1772A>G
  hgvsp: ENSP00000394992.2:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1772A>G
  hgvsp: ENSP00000391964.2:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1772A>G
  hgvsp: ENSP00000388807.1:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1772A>G
  hgvsp: ENSP00000378720.3:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1772A>G
  hgvsp: ENSP00000378725.3:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1772A>G
  hgvsp: ENSP00000432149.1:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1772A>G
  hgvsp: ENSP00000378722.1:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1772A>G
  hgvsp: ENSP00000378719.1:p.Gln591Arg
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln591Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-56104554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104554
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104554
    reference: chr 14
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1774A>G
  hgvsp: ENSP00000394992.2:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1774A>G
  hgvsp: ENSP00000378722.1:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1774A>G
  hgvsp: ENSP00000388807.1:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1774A>G
  hgvsp: ENSP00000432149.1:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1774A>G
  hgvsp: ENSP00000391964.2:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1774A>G
  hgvsp: ENSP00000378725.3:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1774A>G
  hgvsp: ENSP00000378719.1:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1774A>G
  hgvsp: ENSP00000378720.3:p.Ile592Val
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile592Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ

14-56104555-TAGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104555
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104552
    reference: chr 14
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1779_1781delAGC
  hgvsp: ENSP00000378725.3:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1779_1781delAGC
  hgvsp: ENSP00000378719.1:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1779_1781delAGC
  hgvsp: ENSP00000378722.1:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1779_1781delAGC
  hgvsp: ENSP00000378720.3:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1779_1781delAGC
  hgvsp: ENSP00000394992.2:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1779_1781delAGC
  hgvsp: ENSP00000388807.1:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1779_1781delAGC
  hgvsp: ENSP00000391964.2:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1779_1781delAGC
  hgvsp: ENSP00000432149.1:p.Ala594del
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala594del
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: TAGC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

14-56104558-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104558
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104558
    reference: chr 14
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1778C>T
  hgvsp: ENSP00000432149.1:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1778C>T
  hgvsp: ENSP00000378725.3:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1778C>T
  hgvsp: ENSP00000388807.1:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1778C>T
  hgvsp: ENSP00000394992.2:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1778C>T
  hgvsp: ENSP00000378719.1:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1778C>T
  hgvsp: ENSP00000378722.1:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1778C>T
  hgvsp: ENSP00000391964.2:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1778C>T
  hgvsp: ENSP00000378720.3:p.Ala593Val
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24819
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala593Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

14-56104563-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104563
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104563
    reference: chr 14
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1783C>G
  hgvsp: ENSP00000378725.3:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1783C>G
  hgvsp: ENSP00000388807.1:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1783C>G
  hgvsp: ENSP00000432149.1:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1783C>G
  hgvsp: ENSP00000378719.1:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1783C>G
  hgvsp: ENSP00000394992.2:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1783C>G
  hgvsp: ENSP00000378720.3:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1783C>G
  hgvsp: ENSP00000378722.1:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1783C>G
  hgvsp: ENSP00000391964.2:p.Gln595Glu
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln595Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/14-56104572-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104572
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104572
    reference: chr 14
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+7A>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1785+7A>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

14-56104572-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104572
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104572
    reference: chr 14
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+7A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24814
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1785+7A>G
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

14-56104575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104575
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104575
    reference: chr 14
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+10C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-56104580-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104580
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104580
    reference: chr 14
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+15T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

14-56104580-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104580
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104580
    reference: chr 14
allele count: 3
allele frequency: 2.485748375977728e-5
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+15T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-56104583-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104583
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104583
    reference: chr 14
allele count: 3
allele frequency: 2.48714972641353e-5
allele num: 120620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+18T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2420
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24805
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-56104584-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104584
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104584
    reference: chr 14
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+19T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7478
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24801
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

14-56104586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104586
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104586
    reference: chr 14
allele count: 1
allele frequency: 8.296414289743973e-6
allele num: 120534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+21C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3916
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-56104603-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104603
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104603
    reference: chr 14
allele count: 6
allele frequency: 4.99808406777402e-5
allele num: 120046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+38G>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7344
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7438
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-56104604-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104604
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104604
    reference: chr 14
allele count: 1
allele frequency: 8.339448929214757e-6
allele num: 119912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+39C>T
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3902
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24771
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-56104605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104605
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104605
    reference: chr 14
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+40A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8870
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-56104610-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104610
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104610
    reference: chr 14
allele count: 14
allele frequency: 1.167230828233646e-4
allele num: 119942
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+45T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8804
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 2
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-56104617-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56104617
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56104617
    reference: chr 14
allele count: 1
allele frequency: 8.36470096194061e-6
allele num: 119550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1785+52A>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

14-56105852-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105852
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105852
    reference: chr 14
allele count: 6
allele frequency: 5.092946269416858e-5
allele num: 117810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-51A>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12407
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

14-56105874-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105874
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105874
    reference: chr 14
allele count: 8
allele frequency: 6.73797692242904e-5
allele num: 118730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-29T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4540
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13089
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3611
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

14-56105881-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105881
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105881
    reference: chr 14
allele count: 1
allele frequency: 8.38208915190022e-6
allele num: 119302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-22T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

14-56105882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105882
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105882
    reference: chr 14
allele count: 1
allele frequency: 8.379420144126027e-6
allele num: 119340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-21G>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22954
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/14-56105886-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105886
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105886
    reference: chr 14
allele count: 2
allele frequency: 1.672632388853578e-5
allele num: 119572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-17C>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23245
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13097
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

14-56105890-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105890
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105890
    reference: chr 14
allele count: 2
allele frequency: 1.67000668002672e-5
allele num: 119760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-13T>A
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

14-56105899-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105899
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105899
    reference: chr 14
allele count: 1
allele frequency: 8.328197611472925e-6
allele num: 120074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-4T>G
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1786-4T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

14-56105900-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105900
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105900
    reference: chr 14
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1786-3T>C
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13101
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1786-3T>C
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

14-56105908-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105908
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105908
    reference: chr 14
allele count: 948
allele frequency: 7.878858396635694e-3
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1791C>T
  hgvsp: ENST00000395314.3:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1791C>T
  hgvsp: ENST00000438792.2:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1791C>T
  hgvsp: ENST00000416613.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1791C>T
  hgvsp: ENST00000459737.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1791C>T
  hgvsp: ENST00000395309.3:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1791C>T
  hgvsp: ENST00000413890.2:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1791C>T
  hgvsp: ENST00000395308.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1791C>T
  hgvsp: ENST00000395311.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 3.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 23210
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 8313
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 9.75e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 5.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser597Ser
num of homozygotes: 10
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

14-56105909-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105909
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105909
    reference: chr 14
allele count: 11
allele frequency: 9.140615911319407e-5
allele num: 120342
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1792G>A
  hgvsp: ENSP00000378725.3:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1792G>A
  hgvsp: ENSP00000388807.1:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1792G>A
  hgvsp: ENSP00000432149.1:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1792G>A
  hgvsp: ENSP00000394992.2:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1792G>A
  hgvsp: ENSP00000378722.1:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1792G>A
  hgvsp: ENSP00000378720.3:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1792G>A
  hgvsp: ENSP00000391964.2:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1792G>A
  hgvsp: ENSP00000378719.1:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala598Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

14-56105915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105915
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105915
    reference: chr 14
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1798G>A
  hgvsp: ENSP00000388807.1:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1798G>A
  hgvsp: ENSP00000394992.2:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1798G>A
  hgvsp: ENSP00000378722.1:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1798G>A
  hgvsp: ENSP00000378719.1:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1798G>A
  hgvsp: ENSP00000378725.3:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1798G>A
  hgvsp: ENSP00000378720.3:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1798G>A
  hgvsp: ENSP00000391964.2:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1798G>A
  hgvsp: ENSP00000432149.1:p.Val600Ile
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val600Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

14-56105921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105921
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105921
    reference: chr 14
allele count: 1
allele frequency: 8.304130474498016e-6
allele num: 120422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1804G>A
  hgvsp: ENSP00000378720.3:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1804G>A
  hgvsp: ENSP00000378725.3:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1804G>A
  hgvsp: ENSP00000432149.1:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1804G>A
  hgvsp: ENSP00000378719.1:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1804G>A
  hgvsp: ENSP00000391964.2:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1804G>A
  hgvsp: ENSP00000394992.2:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1804G>A
  hgvsp: ENSP00000378722.1:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1804G>A
  hgvsp: ENSP00000388807.1:p.Ala602Thr
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7003
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala602Thr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-56105922-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105922
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105922
    reference: chr 14
allele count: 2
allele frequency: 1.660770929865644e-5
allele num: 120426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1805C>A
  hgvsp: ENSP00000378722.1:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1805C>A
  hgvsp: ENSP00000378719.1:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1805C>A
  hgvsp: ENSP00000394992.2:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1805C>A
  hgvsp: ENSP00000378725.3:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1805C>A
  hgvsp: ENSP00000388807.1:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1805C>A
  hgvsp: ENSP00000378720.3:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1805C>A
  hgvsp: ENSP00000432149.1:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1805C>A
  hgvsp: ENSP00000391964.2:p.Ala602Glu
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23984
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala602Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

14-56105922-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56105922
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 56105919
    reference: chr 14
allele count: 5
allele frequency: 4.151927324664109e-5
allele num: 120426
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000388807
  ensembl transcript: ENST00000416613
  gene symbol: KTN1
  hgvsc: ENST00000416613.1:c.1810_1812delGAA
  hgvsp: ENSP00000388807.1:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000432149
  ensembl transcript: ENST00000459737
  gene symbol: KTN1
  hgvsc: ENST00000459737.1:c.1810_1812delGAA
  hgvsp: ENSP00000432149.1:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000394992
  ensembl transcript: ENST00000413890
  gene symbol: KTN1
  hgvsc: ENST00000413890.2:c.1810_1812delGAA
  hgvsp: ENSP00000394992.2:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378725
  ensembl transcript: ENST00000395314
  gene symbol: KTN1
  hgvsc: ENST00000395314.3:c.1810_1812delGAA
  hgvsp: ENSP00000378725.3:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000391964
  ensembl transcript: ENST00000438792
  gene symbol: KTN1
  hgvsc: ENST00000438792.2:c.1810_1812delGAA
  hgvsp: ENSP00000391964.2:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378719
  ensembl transcript: ENST00000395308
  gene symbol: KTN1
  hgvsc: ENST00000395308.1:c.1810_1812delGAA
  hgvsp: ENSP00000378719.1:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378720
  ensembl transcript: ENST00000395309
  gene symbol: KTN1
  hgvsc: ENST00000395309.3:c.1810_1812delGAA
  hgvsp: ENSP00000378720.3:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126777
  ensembl protein: ENSP00000378722
  ensembl transcript: ENST00000395311
  gene symbol: KTN1
  hgvsc: ENST00000395311.1:c.1810_1812delGAA
  hgvsp: ENSP00000378722.1:p.Glu604del
  variant of: http://identifiers.org/hgnc/6467
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu604del
num of homozygotes: 0
reference allele: CAGA

GenotypeQuality
all individuals: 911
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.846396218983852e-5
allele num: 10156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66124
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.607536e6

QD
type: SiteQuality
SIO_000300: 1.248e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5759
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516714190377965e-5
allele num: 65932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.016e1

QD
type: SiteQuality
SIO_000300: 1.646e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.463e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.058e0

MQRankSum
type: SiteQuality
SIO_000300: -1.388e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.91e-1

DP
type: SiteQuality
SIO_000300: 1.589239e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35459
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.217358865953743e-5
allele num: 16084
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.583334e6

QD
type: SiteQuality
SIO_000300: 1.578e1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeQuality
all individuals: 34470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520727516043675e-5
allele num: 65758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

FS
type: SiteQuality
SIO_000300: 7.282e0

DP
type: SiteQuality
SIO_000300: 1.574471e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.02e0

MQRankSum
type: SiteQuality
SIO_000300: 9.15e-1

MQ
type: SiteQuality
SIO_000300: 5.783e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

GenotypeQuality
all individuals: 3089
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4654
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.66045024643666e-5
allele num: 15014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

FS
type: SiteQuality
SIO_000300: 4.862e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.540757e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.776e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 6.67e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

GenotypeQuality
all individuals: 16857
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5096
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.684804009307321e-4
allele num: 11174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6061676839062e-5
allele num: 62260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.178e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 1.574717e6

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

FS
type: SiteQuality
SIO_000300: 6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

GenotypeQuality
all individuals: 2790
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5096
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16857
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4496
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.2123353678124e-5
allele num: 62260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9098
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

DP
type: SiteQuality
SIO_000300: 1.574717e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

FS
type: SiteQuality
SIO_000300: 6.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9102
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1556
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12775
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2429
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4329
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.187930624851509e-4
allele num: 8418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.960159362549801e-5
allele num: 10040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.523111612175874e-5
allele num: 56768
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.436781609195402e-4
allele num: 6960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.436e0

QD
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.428e0

MQ
type: SiteQuality
SIO_000300: 5.995e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-2

FS
type: SiteQuality
SIO_000300: 1.5165e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
type: SiteQuality
SIO_000300: 1.602769e6

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 45

GenotypeQuality
all individuals: 1726
bin: 5.25e1
variant carriers: 172

GenotypeQuality
all individuals: 2483
bin: 3.75e1
variant carriers: 230

GenotypeQuality
all individuals: 1210
bin: 6.75e1
variant carriers: 103

GenotypeQuality
all individuals: 4354
bin: 7.5e0
variant carriers: 239

GenotypeQuality
all individuals: 719
bin: 7.75e1
variant carriers: 70

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 34

GenotypeQuality
all individuals: 2081
bin: 4.25e1
variant carriers: 210

GenotypeQuality
all individuals: 2476
bin: 6.25e1
variant carriers: 79

GenotypeQuality
all individuals: 899
bin: 7.25e1
variant carriers: 70

GenotypeQuality
all individuals: 6723
bin: 2.25e1
variant carriers: 312

GenotypeQuality
all individuals: 3417
bin: 2.75e1
variant carriers: 271

African
type: Population
allele count: 148
allele frequency: 2.799848656829361e-2
allele num: 5286
num of homozygotes: 0

East Asian
type: Population
allele count: 140
allele frequency: 3.70174510840825e-2
allele num: 3782
num of homozygotes: 0

Latino
type: Population
allele count: 259
allele frequency: 4.161311053984576e-2
allele num: 6224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 96
allele frequency: 2.56e-2
allele num: 3750
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 4.337899543378995e-2
allele num: 438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1303
allele frequency: 3.826950187969925e-2
allele num: 34048
num of homozygotes: 1

South Asian
type: Population
allele count: 355
allele frequency: 5.848434925864909e-2
allele num: 6070
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.395109e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.51e0

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 2980
bin: 1.25e1
variant carriers: 530

GenotypeQuality
all individuals: 6723
bin: 2.25e1
variant carriers: 744

GenotypeQuality
all individuals: 2081
bin: 4.25e1
variant carriers: 911

GenotypeQuality
all individuals: 3417
bin: 2.75e1
variant carriers: 872

GenotypeQuality
all individuals: 2818
bin: 1.75e1
variant carriers: 625

GenotypeQuality
all individuals: 1823
bin: 4.75e1
variant carriers: 854

GenotypeQuality
all individuals: 2483
bin: 3.75e1
variant carriers: 971

GenotypeQuality
all individuals: 899
bin: 7.25e1
variant carriers: 544

GenotypeQuality
all individuals: 2476
bin: 6.25e1
variant carriers: 598

GenotypeQuality
all individuals: 3129
bin: 9.75e1
variant carriers: 2294

GenotypeQuality
all individuals: 1210
bin: 6.75e1
variant carriers: 559

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 247

Other
type: Population
allele count: 74
allele frequency: 1.689497716894977e-1
allele num: 438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 434
allele frequency: 1.157333333333333e-1
allele num: 3750
num of homozygotes: 0

African
type: Population
allele count: 838
allele frequency: 1.585319712447976e-1
allele num: 5286
num of homozygotes: 0

South Asian
type: Population
allele count: 1471
allele frequency: 2.42339373970346e-1
allele num: 6070
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 6520
allele frequency: 1.914943609022556e-1
allele num: 34048
num of homozygotes: 0

East Asian
type: Population
allele count: 631
allele frequency: 1.668429402432575e-1
allele num: 3782
num of homozygotes: 0

Latino
type: Population
allele count: 1429
allele frequency: 2.295951156812339e-1
allele num: 6224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.395109e6

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

QD
type: SiteQuality
SIO_000300: 2.51e0

GenotypeQuality
all individuals: 1823
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 17733
bin: 2.5e0
variant carriers: 17

GenotypeQuality
all individuals: 2980
bin: 1.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2939
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 6723
bin: 2.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2476
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2818
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3417
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1210
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3129
bin: 9.75e1
variant carriers: 56

GenotypeQuality
all individuals: 1726
bin: 5.25e1
variant carriers: 13

Latino
type: Population
allele count: 18
allele frequency: 2.892030848329049e-3
allele num: 6224
num of homozygotes: 0

African
type: Population
allele count: 58
allele frequency: 1.097237987135831e-2
allele num: 5286
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 1.322051824431518e-3
allele num: 3782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 53
allele frequency: 1.556625939849624e-3
allele num: 34048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.333333333333334e-4
allele num: 3750
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.317957166392092e-3
allele num: 6070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

QD
type: SiteQuality
SIO_000300: 2.51e0

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.395109e6

GenotypeQuality
all individuals: 4354
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 3417
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2476
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2818
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2081
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3129
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 719
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 592
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.666666666666667e-4
allele num: 3750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3782
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 6.589785831960461e-4
allele num: 6070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 3.230733082706767e-4
allele num: 34048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 1.395109e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.51e0

African
type: Population
allele count: 2
allele frequency: 3.783579265985623e-4
allele num: 5286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.93703007518797e-5
allele num: 34048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.029e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 2.51e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 1.395109e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 1898
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2174
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.373626373626374e-3
allele num: 2184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2142
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.445e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.258e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.418e0

DP
type: SiteQuality
SIO_000300: 8.8911e5

GenotypeQuality
all individuals: 1162
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17386
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1073
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4544
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6096
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.846449278038332e-5
allele num: 54158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7808
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.584e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.064e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 1.288402e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 3.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4579
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2725
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.81218513283317e-5
allele num: 55182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.021e0

VQSLOD
type: SiteQuality
SIO_000300: -4.838e-1

DP
type: SiteQuality
SIO_000300: 1.263999e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 6.842e0

QD
type: SiteQuality
SIO_000300: 1.074e1

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1334
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2136
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1181
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2026
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2167
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1525
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.072708826513358e-4
allele num: 5914
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.437607425232039e-4
allele num: 5818
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.713704206241519e-3
allele num: 7370
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.831417624521073e-4
allele num: 10440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 5.673814368445766e-4
allele num: 51112
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.152293e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

QD
type: SiteQuality
SIO_000300: 1.197e1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8235
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5791
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1525
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5818
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.014098690835851e-4
allele num: 9930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

DP
type: SiteQuality
SIO_000300: 1.152293e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 910
bin: 5.25e1
variant carriers: 271

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 242

GenotypeQuality
all individuals: 5500
bin: 2.5e0
variant carriers: 131

GenotypeQuality
all individuals: 6714
bin: 9.75e1
variant carriers: 5354

GenotypeQuality
all individuals: 6099
bin: 6.25e1
variant carriers: 183

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 251

GenotypeQuality
all individuals: 4283
bin: 3.25e1
variant carriers: 177

GenotypeQuality
all individuals: 1494
bin: 6.75e1
variant carriers: 234

GenotypeQuality
all individuals: 2470
bin: 3.75e1
variant carriers: 171

GenotypeQuality
all individuals: 479
bin: 8.25e1
variant carriers: 213

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 251

GenotypeQuality
all individuals: 4124
bin: 2.75e1
variant carriers: 192

European (Non-Finnish)
type: Population
allele count: 3512
allele frequency: 7.942466868696006e-2
allele num: 44218
num of homozygotes: 71

Latino
type: Population
allele count: 982
allele frequency: 1.149882903981265e-1
allele num: 8540
num of homozygotes: 33

African
type: Population
allele count: 1132
allele frequency: 1.730886850152905e-1
allele num: 6540
num of homozygotes: 75

Other
type: Population
allele count: 57
allele frequency: 8.878504672897196e-2
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 289
allele frequency: 6.089338390223346e-2
allele num: 4746
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 406
allele frequency: 7.56333830104322e-2
allele num: 5368
num of homozygotes: 5

South Asian
type: Population
allele count: 697
allele frequency: 8.660536779324056e-2
allele num: 8048
num of homozygotes: 19

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.419999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.066699e6

GenotypeQuality
all individuals: 1920
bin: 1.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1494
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 6714
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 2013
bin: 1.75e1
variant carriers: 31

GenotypeQuality
all individuals: 4124
bin: 2.75e1
variant carriers: 19

GenotypeQuality
all individuals: 14823
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 479
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4283
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 6099
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 1

East Asian
type: Population
allele count: 4
allele frequency: 8.428150021070375e-4
allele num: 4746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.862891207153502e-4
allele num: 5368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 6.558415125062192e-4
allele num: 44218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.405152224824356e-3
allele num: 8540
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.645259938837921e-4
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 9.940357852882703e-4
allele num: 8048
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.419999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.066699e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

GenotypeQuality
all individuals: 14823
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 910
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4283
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2470
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6099
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 665
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 479
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6714
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1025
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.697813121272366e-4
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 2.035370211226197e-4
allele num: 44218
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.557632398753894e-3
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.107037505267594e-4
allele num: 4746
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.405152224824356e-3
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5368
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

DP
type: SiteQuality
SIO_000300: 1.066699e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.419999999999999e-2

GenotypeQuality
all individuals: 1920
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4465
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6714
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1494
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5368
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.242544731610338e-4
allele num: 8048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.058103975535168e-4
allele num: 6540
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.419999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 1.066699e6

GenotypeQuality
all individuals: 635
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 5153
bin: 3.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1146
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 18835
bin: 2.25e1
variant carriers: 8

GenotypeQuality
all individuals: 5841
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 2269
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2252
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6615
bin: 6.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1784
bin: 9.75e1
variant carriers: 69

GenotypeQuality
all individuals: 888
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2738
bin: 3.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.956393200295639e-3
allele num: 5412
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.525719267654751e-3
allele num: 4588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Latino
type: Population
allele count: 88
allele frequency: 1.04662226450999e-2
allele num: 8408
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 9.398496240601503e-4
allele num: 6384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 1.122386942898564e-3
allele num: 42766
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 3.181336161187699e-3
allele num: 7544
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

FS
type: SiteQuality
SIO_000300: 2.943e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.502e0

QD
type: SiteQuality
SIO_000300: 3.3e0

DP
type: SiteQuality
SIO_000300: 1.00908e6

GenotypeQuality
all individuals: 7164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6561
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4220
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.79876854184159e-4
allele num: 7146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8706
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.562011871290222e-4
allele num: 6402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

DP
type: SiteQuality
SIO_000300: 8.61341e5

GenotypeQuality
all individuals: 3666
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 561
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17320
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.33275e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-1

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4189
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6610
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.591076333108774e-5
allele num: 38594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.813e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.12994e5

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 5.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.271e0

GenotypeQuality
all individuals: 14416
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5884
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.592823065753993e-5
allele num: 38568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.039e0

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 8.10761e5

VQSLOD
type: SiteQuality
SIO_000300: 6.45e-1

FS
type: SiteQuality
SIO_000300: 2.706e0

MQ
type: SiteQuality
SIO_000300: 4.065e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 4.85e0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6310
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6683
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1164
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 9.976720984369804e-4
allele num: 6014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.701258931609391e-4
allele num: 5878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

MQ
type: SiteQuality
SIO_000300: 5.833e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.806e0

DP
type: SiteQuality
SIO_000300: 8.10129e5

QD
type: SiteQuality
SIO_000300: 1.108e1

GenotypeQuality
all individuals: 554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2299
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507749834147518e-5
allele num: 66324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.414e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: -1.06e0

DP
type: SiteQuality
SIO_000300: 2.661029e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 1.145e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

GenotypeQuality
all individuals: 261
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24827
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505933377507379e-5
allele num: 66404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 9.558e0

DP
type: SiteQuality
SIO_000300: 2.669389e6

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.698e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.87e-1

QD
type: SiteQuality
SIO_000300: 2.882e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
all individuals: 12728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24828
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4716
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.240639041437844e-5
allele num: 16024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.07e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.685871e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.814e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

MQRankSum
type: SiteQuality
SIO_000300: 9.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

QD
type: SiteQuality
SIO_000300: 1.7e1

GenotypeQuality
all individuals: 4240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24828
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 371
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3923
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.206554121151936e-5
allele num: 16112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -3.49e-2

FS
type: SiteQuality
SIO_000300: 5.753e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

QD
type: SiteQuality
SIO_000300: 1.368e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 2.689163e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24828
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13752
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.846153846153846e-4
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.697641e6

FS
type: SiteQuality
SIO_000300: 5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
all individuals: 4205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501800720288115e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.235e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.312e0

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 1.727e0

DP
type: SiteQuality
SIO_000300: 2.697694e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
all individuals: 4778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3924
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4244
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24825
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.176e0

FS
type: SiteQuality
SIO_000300: 6.49e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.697889e6

QD
type: SiteQuality
SIO_000300: 1.014e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.891e0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4777
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3924
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 4244
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
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MQ
type: SiteQuality
SIO_000300: 5.763e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

FS
type: SiteQuality
SIO_000300: 4.404e0

DP
type: SiteQuality
SIO_000300: 2.69792e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.768e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.164e0

QD
type: SiteQuality
SIO_000300: 7.36e0

VQSLOD
type: SiteQuality
SIO_000300: -3.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2448
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: -6.417e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

FS
type: SiteQuality
SIO_000300: 1.0151e1

ReadPosRankSum
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SIO_000300: -1.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
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SIO_000300: 2.697743e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.28e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.697708e6

FS
type: SiteQuality
SIO_000300: 3.563e0

MQRankSum
type: SiteQuality
SIO_000300: -1.744e0

VQSLOD
type: SiteQuality
SIO_000300: -1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.011e0

QD
type: SiteQuality
SIO_000300: 1.209e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.285e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216249087813184e-4
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.697171e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

FS
type: SiteQuality
SIO_000300: 7.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.907e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.17e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.47e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.55e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.696722e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.77e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 5.34e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.98e-1

InbreedingCoeff
type: SiteQuality
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DP
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VQSLOD
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MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

Other
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South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.021e0

QD
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VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e0

MQ
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SIO_000300: 5.99e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.284e1

FS
type: SiteQuality
SIO_000300: 4.69e0

DP
type: SiteQuality
SIO_000300: 2.689531e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.99e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

DP
type: SiteQuality
SIO_000300: 2.689531e6

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.878e0

QD
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SIO_000300: 1.236e1

BaseQRankSum
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DP
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.986e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.174364040503828e-5
allele num: 16196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

DP
type: SiteQuality
SIO_000300: 2.682989e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.475440222428174e-4
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.682989e6

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.587e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.529e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 5.06e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

East Asian
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allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1347e1

ClippingRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.159554730983302e-4
allele num: 8624
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.772161448509996e-4
allele num: 15906
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African
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15800
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.567e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 2.639592e6

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.633791e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
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allele count: 14
allele frequency: 8.85851683118198e-4
allele num: 15804
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 1.717e1

DP
type: SiteQuality
SIO_000300: 2.621488e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 6.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.66e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.246e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.609397e6

QD
type: SiteQuality
SIO_000300: 1.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

VQSLOD
type: SiteQuality
SIO_000300: -3.903e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

South Asian
type: Population
allele count: 2
allele frequency: 1.24750499001996e-4
allele num: 16032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.963535473642489e-4
allele num: 10092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 1.956442e6

MQ
type: SiteQuality
SIO_000300: 5.709e1

QD
type: SiteQuality
SIO_000300: 1.035e1

FS
type: SiteQuality
SIO_000300: 3.535e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 186
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
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South Asian
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allele count: 8
allele frequency: 4.951107810372571e-4
allele num: 16158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.49e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

ReadPosRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.827044025157233e-5
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.4e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.23e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52151421094273e-5
allele num: 65724
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6522
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8532
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
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allele num: 11256
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
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allele num: 11272
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
type: Population
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.228652168571078e-4
allele num: 16278
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Other
type: Population
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allele num: 894
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6530
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MQ
type: SiteQuality
SIO_000300: 5.889e1

MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 2
allele frequency: 2.336448598130841e-4
allele num: 8560
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.123e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.070059e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.101e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3186
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6939
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.837e0

MQ
type: SiteQuality
SIO_000300: 5.794e1

MQRankSum
type: SiteQuality
SIO_000300: -7.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.446e1

VQSLOD
type: SiteQuality
SIO_000300: -1.471e0

DP
type: SiteQuality
SIO_000300: 2.075104e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 6943
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512127260630255e-5
allele num: 66132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

DP
type: SiteQuality
SIO_000300: 2.075639e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 1.523e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 9.75e1
variant carriers: 927

GenotypeQuality
all individuals: 1725
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.514798415287812e-3
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.651884700665188e-3
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 362
allele frequency: 2.205165692007797e-2
allele num: 16416
num of homozygotes: 6

African
type: Population
allele count: 191
allele frequency: 1.855089355089355e-2
allele num: 10296
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 288
allele frequency: 4.34953333131966e-3
allele num: 66214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 50
allele frequency: 7.619628162145687e-3
allele num: 6562
num of homozygotes: 1

Latino
type: Population
allele count: 38
allele frequency: 3.348017621145374e-3
allele num: 11350
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

FS
type: SiteQuality
SIO_000300: 1.206e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

QD
type: SiteQuality
SIO_000300: 1.143e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

DP
type: SiteQuality
SIO_000300: 2.106792e6

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23953
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 4628
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 8
allele frequency: 7.047216349541931e-4
allele num: 11352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019688368160406e-5
allele num: 66232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.893e1

VQSLOD
type: SiteQuality
SIO_000300: -5.95e-1

DP
type: SiteQuality
SIO_000300: 2.086275e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 7004
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.086427267194157e-5
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.86e1

VQSLOD
type: SiteQuality
SIO_000300: -1.543e0

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

FS
type: SiteQuality
SIO_000300: 1.144e0

DP
type: SiteQuality
SIO_000300: 2.086718e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.946e0

QD
type: SiteQuality
SIO_000300: 8.99e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.581e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 8.42e0

DP
type: SiteQuality
SIO_000300: 2.086871e6

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: -6.165e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.472e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2464
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GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017592564651921e-5
allele num: 66278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.087241e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

MQ
type: SiteQuality
SIO_000300: 5.807e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.162e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.84e-1

QD
type: SiteQuality
SIO_000300: 1.373e1