11-2154921-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154921
    reference: chr 11
allele count: 971
allele frequency: 8.899112838184618e-3
allele num: 109112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-17C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-26C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-17C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-26C>G
  variant of: http://identifiers.org/hgnc/33527
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13671
  bin: 2.25e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 1.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 14739
  bin: 2.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 3.25e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 13772
  bin: 1.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4097
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12129
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 33
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-2154922-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154922
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154922
    reference: chr 11
allele count: 1
allele frequency: 9.199632014719412e-6
allele num: 108700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-27G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-27G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-27G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-27G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-27G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-18G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-27G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-27G>C
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12419
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

11-2154922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154922
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154922
    reference: chr 11
allele count: 3
allele frequency: 2.759889604415823e-5
allele num: 108700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-27G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-18G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-18G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-27G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-27G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-27G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-27G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-27G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-27G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13616
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13975
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25372
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-2154923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154923
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154923
    reference: chr 11
allele count: 3
allele frequency: 2.767578737615085e-5
allele num: 108398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-19G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-19G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-28G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-28G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-28G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-28G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-28G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-28G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-28G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14960
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-2154924-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154924
    reference: chr 11
allele count: 5
allele frequency: 4.61629367013812e-5
allele num: 108312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-29C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-29C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-29C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-29C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-29C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-20C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-20C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-29C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-29C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13950
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/11-2154934-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154934
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154934
    reference: chr 11
allele count: 4
allele frequency: 3.777719013259794e-5
allele num: 105884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-39G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-39G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-39G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-39G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-30G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-39G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-30G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-39G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-39G>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17908
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-2154934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154934
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154934
    reference: chr 11
allele count: 4
allele frequency: 3.777719013259794e-5
allele num: 105884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-39G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-30G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-39G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-39G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-39G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-39G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-30G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-39G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-39G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9999
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17908
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5047
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-2154935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154935
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154935
    reference: chr 11
allele count: 4
allele frequency: 3.791828609346858e-5
allele num: 105490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-31C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-40C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-40C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-31C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-40C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-40C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-40C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-40C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-40C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4056
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16717
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

11-2154935-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154935
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154935
    reference: chr 11
allele count: 3
allele frequency: 2.843871457010143e-5
allele num: 105490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-31C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-40C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-40C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-40C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-40C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-40C>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-40C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-31C>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-40C>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18025
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5041
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-2154936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154936
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154936
    reference: chr 11
allele count: 1
allele frequency: 9.482987520388423e-6
allele num: 105452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-41G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-41G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-32G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-32G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

11-2154939-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154939
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154939
    reference: chr 11
allele count: 1
allele frequency: 9.523083955508151e-6
allele num: 105008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-35A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-44A>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-44A>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-35A>G
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18232
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5054
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/11-2154942-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154942
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154942
    reference: chr 11
allele count: 1
allele frequency: 9.694243558175156e-6
allele num: 103154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-38G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-38G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-47G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-47G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-47G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-47G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-47G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-47G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-47G>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13811
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-2154949-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154949
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154949
    reference: chr 11
allele count: 1
allele frequency: 9.953814301640389e-6
allele num: 100464
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-54G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-45G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-54G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-45G>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-2154950-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154950
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154950
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 99884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-55G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-55G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-55G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-55G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-55G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-55G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-46G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-46G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-55G>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12453
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

11-2154952-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154952
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154952
    reference: chr 11
allele count: 4
allele frequency: 4.068348250610252e-5
allele num: 98320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-48G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-57G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-57G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-48G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-57G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-57G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-57G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-57G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-57G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16922
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9675
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14570
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11751
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-2154953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154953
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154953
    reference: chr 11
allele count: 7
allele frequency: 7.259302277346829e-5
allele num: 96428
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-49C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-58C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-58C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-58C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-58C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-58C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-49C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-58C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-58C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16786
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14497
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6655
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3975
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10312
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

11-2154953-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154953
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154953
    reference: chr 11
allele count: 1
allele frequency: 1.037043182478118e-5
allele num: 96428
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-58C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-58C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-58C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-49C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-58C>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-58C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-58C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-49C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-58C>G
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16786
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-2154954-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154954
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2154953
    reference: chr 11
allele count: 1
allele frequency: 1.029802483883591e-5
allele num: 97106
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-60delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-51delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-60delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-60delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-60delT
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-51delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-60delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-60delT
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-60delT
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16859
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4333
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: GA
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-2155314-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155314
    reference: chr 11
allele count: 1
allele frequency: 1.625699050591755e-5
allele num: 61512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-410C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-419C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-410C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-419C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-419C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-419C>G
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-419C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-419C>G
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-419C>G
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7800
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP

11-2155326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155326
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155326
    reference: chr 11
allele count: 2
allele frequency: 3.209860692045965e-5
allele num: 62308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-422G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-431G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-431G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-431G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-431G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-422G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-431G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-431G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-431G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4820
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3744
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-2155332-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155332
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155332
    reference: chr 11
allele count: 1
allele frequency: 1.583280557314756e-5
allele num: 63160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-437G>C
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-428G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-437G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-437G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-428G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-437G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-437G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-437G>C
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-437G>C
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4977
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

11-2155335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155335
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155335
    reference: chr 11
allele count: 20
allele frequency: 3.135091074395711e-4
allele num: 63794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-440C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-431C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-440C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-431C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12605
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23456
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10497
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4640
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11372
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-2155337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155337
    reference: chr 11
allele count: 1
allele frequency: 1.561572816140417e-5
allele num: 64038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-442C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-433C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-442C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-442C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-433C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-442C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-442C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-442C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-442C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11409
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-2155376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155376
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155376
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 68032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-481G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-481G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-472G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-472G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: mature_miRNA_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.64G>A
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-481G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-481G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-481G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-481G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-481G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: mature miRNA
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22849
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-2155377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155377
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155377
    reference: chr 11
allele count: 10
allele frequency: 1.484428346643708e-4
allele num: 67366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-473C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: mature_miRNA_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.63C>T
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-482C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-482C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-473C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: mature miRNA
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15721
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23039
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

11-2155379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155379
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155379
    reference: chr 11
allele count: 1
allele frequency: 1.489380715498496e-5
allele num: 67142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: mature_miRNA_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.61C>T
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-475C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-484C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-484C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-475C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: mature miRNA
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

11-2155384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155384
    reference: chr 11
allele count: 1
allele frequency: 1.535202186127913e-5
allele num: 65138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-480C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-489C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-489C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-489C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-489C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: mature_miRNA_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.56C>T
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-480C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-489C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-489C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-489C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: mature miRNA
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13297
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-2155399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155399
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155399
    reference: chr 11
allele count: 9
allele frequency: 1.467375354615711e-4
allele num: 61334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-495C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-504C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.41C>T
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-504C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-495C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23803
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10898
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29053
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

11-2155427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155427
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155427
    reference: chr 11
allele count: 3
allele frequency: 6.561679790026247e-5
allele num: 45720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-532G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-532G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-532G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-532G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-523G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-532G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-523G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.13G>A
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-532G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-532G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-2155435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155435
    reference: chr 11
allele count: 1
allele frequency: 2.31107002542177e-5
allele num: 43270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-531G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-540G>A
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.5G>A
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-540G>A
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-531G>A
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13453
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/11-2155437-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155437
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155437
    reference: chr 11
allele count: 1
allele frequency: 2.334921079667507e-5
allele num: 42828
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-542G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-533G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-542G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-542G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-542G>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-542G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-533G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.3G>T
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-542G>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-542G>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-2155437-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155437
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155436
    reference: chr 11
allele count: 1
allele frequency: 2.334921079667507e-5
allele num: 42828
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-543delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-543delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-543delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-534delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-543delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-534delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-543delA
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207805
  ensembl transcript: ENST00000385070
  gene symbol: MIR483
  hgvsc: ENST00000385070.1:n.2delA
  variant of: http://identifiers.org/hgnc/32340
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-543delA
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-543delA
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13637
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: CT
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

11-2155467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155467
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 2155467
    reference: chr 11
allele count: 1
allele frequency: 2.887669650591972e-5
allele num: 34630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000414497
  ensembl transcript: ENST00000416167
  gene symbol: IGF2
  hgvsc: ENST00000416167.2:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370799
  ensembl transcript: ENST00000381392
  gene symbol: IGF2
  hgvsc: ENST00000381392.1:c.158-563C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000402047
  ensembl transcript: ENST00000418738
  gene symbol: IGF2
  hgvsc: ENST00000418738.2:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000129965
  ensembl protein: ENSP00000348986
  ensembl transcript: ENST00000356578
  gene symbol: INS-IGF2
  hgvsc: ENST00000356578.4:c.*210-572C>T
  variant of: http://identifiers.org/hgnc/33527
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000391826
  ensembl transcript: ENST00000434045
  gene symbol: IGF2
  hgvsc: ENST00000434045.2:c.326-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370813
  ensembl transcript: ENST00000381406
  gene symbol: IGF2
  hgvsc: ENST00000381406.4:c.158-563C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000300632
  ensembl transcript: ENST00000300632
  gene symbol: IGF2
  hgvsc: ENST00000300632.5:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370796
  ensembl transcript: ENST00000381389
  gene symbol: IGF2
  hgvsc: ENST00000381389.1:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167244
  ensembl protein: ENSP00000370802
  ensembl transcript: ENST00000381395
  gene symbol: IGF2
  hgvsc: ENST00000381395.1:c.158-572C>T
  variant of: http://identifiers.org/hgnc/5466
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

15-90210367-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210367
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210367
    reference: chr 15
allele count: 4
allele frequency: 3.309285856112251e-5
allele num: 120872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.1009C>G
  hgvsp: ENSP00000402167.2:p.His337Asp
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.1009C>G
  hgvsp: ENSP00000300055.5:p.His337Asp
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.85C>G
  hgvsp: ENSP00000453426.1:p.His29Asp
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23166
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His337Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

15-90210368-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210368
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210368
    reference: chr 15
allele count: 2
allele frequency: 1.654779831543413e-5
allele num: 120862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.1008A>G
  hgvsp: ENST00000430628.2:c.1008A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.84A>G
  hgvsp: ENST00000560330.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.1008A>G
  hgvsp: ENST00000300055.5:c.1008A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23164
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala336Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

15-90210369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210369
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210369
    reference: chr 15
allele count: 5
allele frequency: 4.138045187453447e-5
allele num: 120830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.83C>T
  hgvsp: ENSP00000453426.1:p.Ala28Val
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.1007C>T
  hgvsp: ENSP00000300055.5:p.Ala336Val
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.1007C>T
  hgvsp: ENSP00000402167.2:p.Ala336Val
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23164
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5859
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 515
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala336Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

15-90210371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210371
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210371
    reference: chr 15
allele count: 1
allele frequency: 8.279790686891435e-6
allele num: 120776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.1005G>A
  hgvsp: ENST00000430628.2:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.1005G>A
  hgvsp: ENST00000300055.5:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.81G>A
  hgvsp: ENST00000560330.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5824
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23164
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4444
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val335Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-90210375-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210375
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210375
    reference: chr 15
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.1001G>C
  hgvsp: ENSP00000402167.2:p.Gly334Ala
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.1001G>C
  hgvsp: ENSP00000300055.5:p.Gly334Ala
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.77G>C
  hgvsp: ENSP00000453426.1:p.Gly26Ala
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23164
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly334Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

15-90210383-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210383
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210383
    reference: chr 15
allele count: 2
allele frequency: 1.660743348722888e-5
allele num: 120428
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.993C>T
  hgvsp: ENST00000430628.2:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.993C>T
  hgvsp: ENST00000300055.5:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.69C>T
  hgvsp: ENST00000560330.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23162
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu331Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

15-90210385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210385
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210385
    reference: chr 15
allele count: 2
allele frequency: 1.663589026966778e-5
allele num: 120222
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.991C>T
  hgvsp: ENSP00000300055.5:p.Leu331Phe
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.67C>T
  hgvsp: ENSP00000453426.1:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.991C>T
  hgvsp: ENSP00000402167.2:p.Leu331Phe
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5663
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23161
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu331Phe
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

15-90210386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210386
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210386
    reference: chr 15
allele count: 15
allele frequency: 1.247380500948009e-4
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.990C>T
  hgvsp: ENST00000300055.5:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.66C>T
  hgvsp: ENST00000560330.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.990C>T
  hgvsp: ENST00000430628.2:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23163
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12382
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly330Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

15-90210387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210387
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210387
    reference: chr 15
allele count: 1
allele frequency: 8.316284949187499e-6
allele num: 120246
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.989G>A
  hgvsp: ENSP00000300055.5:p.Gly330Asp
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.65G>A
  hgvsp: ENSP00000453426.1:p.Gly22Asp
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.989G>A
  hgvsp: ENSP00000402167.2:p.Gly330Asp
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10377
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly330Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

15-90210390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210390
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210390
    reference: chr 15
allele count: 5
allele frequency: 4.159110948443661e-5
allele num: 120218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.62G>A
  hgvsp: ENSP00000453426.1:p.Arg21Gln
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.986G>A
  hgvsp: ENSP00000402167.2:p.Arg329Gln
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.986G>A
  hgvsp: ENSP00000300055.5:p.Arg329Gln
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23155
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4393
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg329Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

15-90210391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210391
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210391
    reference: chr 15
allele count: 3
allele frequency: 2.495425054067543e-5
allele num: 120220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.61C>T
  hgvsp: ENSP00000453426.1:p.Arg21Ter
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.985C>T
  hgvsp: ENSP00000402167.2:p.Arg329Ter
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.985C>T
  hgvsp: ENSP00000300055.5:p.Arg329Ter
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23152
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12510
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4395
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg329Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

15-90210391-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210391
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210391
    reference: chr 15
allele count: 1
allele frequency: 8.318083513558476e-6
allele num: 120220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.61C>G
  hgvsp: ENSP00000453426.1:p.Arg21Gly
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.985C>G
  hgvsp: ENSP00000402167.2:p.Arg329Gly
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.985C>G
  hgvsp: ENSP00000300055.5:p.Arg329Gly
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12510
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23152
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg329Gly
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

15-90210395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210395
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210395
    reference: chr 15
allele count: 11
allele frequency: 9.16178038379531e-5
allele num: 120064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.981C>T
  hgvsp: ENST00000430628.2:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.981C>T
  hgvsp: ENST00000300055.5:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.57C>T
  hgvsp: ENST00000560330.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4053
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23151
  bin: 9.75e1
  variant carriers: 11
hgvs: p.Gly327Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

15-90210401-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210401
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210401
    reference: chr 15
allele count: 4
allele frequency: 3.333888981496916e-5
allele num: 119980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.975G>C
  hgvsp: ENST00000430628.2:c.975G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.975G>C
  hgvsp: ENST00000300055.5:c.975G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.51G>C
  hgvsp: ENST00000560330.1:c.51G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23147
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12355
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu325Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

15-90210405-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210405
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210406
    reference: chr 15
allele count: 3
allele frequency: 2.502836548087833e-5
allele num: 119864
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.46dupG
  hgvsp: ENSP00000453426.1:p.Ala16GlyfsTer56
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.970dupG
  hgvsp: ENSP00000300055.5:p.Ala324GlyfsTer69
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.970dupG
  hgvsp: ENSP00000402167.2:p.Ala324GlyfsTer69
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23147
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Ala324GlyfsTer69
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

15-90210413-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210413
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210413
    reference: chr 15
allele count: 5
allele frequency: 4.173344017094017e-5
allele num: 119808
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-1G>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-1G>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-1G>C
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23149
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 9.25e1
  variant carriers: 0
hgvs: c.964-1G>C
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

15-90210413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210413
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210413
    reference: chr 15
allele count: 3
allele frequency: 2.50400641025641e-5
allele num: 119808
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-1G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-1G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-1G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23149
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
hgvs: c.964-1G>A
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

15-90210419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210419
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210419
    reference: chr 15
allele count: 1
allele frequency: 8.354916868577158e-6
allele num: 119690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-7C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-7C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-7C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5535
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2982
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23142
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12002
  bin: 6.25e1
  variant carriers: 0
hgvs: c.964-7C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-90210420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210420
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210420
    reference: chr 15
allele count: 16
allele frequency: 1.336563361456854e-4
allele num: 119710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-8G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-8G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-8G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23144
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
hgvs: c.964-8G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

15-90210426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210426
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210426
    reference: chr 15
allele count: 1
allele frequency: 8.362322718758362e-6
allele num: 119584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-14G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-14G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-14G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2965
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 291
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23139
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

15-90210431-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210431
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210431
    reference: chr 15
allele count: 2
allele frequency: 1.672968180145214e-5
allele num: 119548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-19A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-19A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-19A>G
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9622
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ

15-90210435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210435
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210435
    reference: chr 15
allele count: 1
allele frequency: 8.373245805003851e-6
allele num: 119428
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-23A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-23A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-23A>G
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23135
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3696
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/15-90210437-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210437
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210437
    reference: chr 15
allele count: 5941
allele frequency: 4.976212014607833e-2
allele num: 119388
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-25G>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-25G>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-25G>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 6.25e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.75e1
  variant carriers: 769
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 2.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 397
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.25e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 6.75e1
  variant carriers: 515
genotype depth: GenotypeDepth
  all individuals: 9564
  bin: 3.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 2.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 5.25e1
  variant carriers: 416
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.25e1
  variant carriers: 444
genotype depth: GenotypeDepth
  all individuals: 8032
  bin: 3.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 5.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 4.75e1
  variant carriers: 339
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.25e1
  variant carriers: 365
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10632
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5063
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 7.75e1
  variant carriers: 6
num of homozygotes: 142
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

15-90210438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210438
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210438
    reference: chr 15
allele count: 1
allele frequency: 8.38335401227323e-6
allele num: 119284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-26G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-26G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-26G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22976
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11292
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-90210442-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210442
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210442
    reference: chr 15
allele count: 14
allele frequency: 1.174536058256989e-4
allele num: 119196
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-30A>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-30A>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-30A>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22983
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4331
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

15-90210446-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210446
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210446
    reference: chr 15
allele count: 1
allele frequency: 8.40279645065878e-6
allele num: 119008
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-34C>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-34C>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-34C>G
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5652
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22972
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10468
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

15-90210454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210454
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210454
    reference: chr 15
allele count: 2
allele frequency: 1.686539726443256e-5
allele num: 118586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-42G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-42G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-42G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 22970
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

15-90210455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210455
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210455
    reference: chr 15
allele count: 1
allele frequency: 8.431418839162254e-6
allele num: 118604
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-43G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-43G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-43G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

15-90210459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210459
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210459
    reference: chr 15
allele count: 2
allele frequency: 1.694369609786679e-5
allele num: 118038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-47G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-47G>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-47G>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

15-90210463-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210463
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210464
    reference: chr 15
allele count: 6
allele frequency: 5.080870522482852e-5
allele num: 118090
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.40-52dupG
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.964-52dupG
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.964-52dupG
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9011
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2812
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22980
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum

15-90210782-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210782
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210782
    reference: chr 15
allele count: 3
allele frequency: 2.475860361475613e-5
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+51A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+51A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+51A>G
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39028
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9050
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 6233
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 86
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

15-90210784-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210784
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210784
    reference: chr 15
allele count: 12
allele frequency: 9.904422324567919e-5
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+49T>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+49T>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+49T>C
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 985
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

15-90210788-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210788
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210788
    reference: chr 15
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+45G>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+45G>C
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+45G>C
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1967
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 39107
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 370
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

15-90210793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210793
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210793
    reference: chr 15
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+40C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+40C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+40C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-90210795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210795
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210795
    reference: chr 15
allele count: 5
allele frequency: 4.129023733628421e-5
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+38C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+38C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+38C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6188
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

15-90210799-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210799
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210799
    reference: chr 15
allele count: 237
allele frequency: 1.95822454308094e-3
allele num: 121028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+34A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+34A>G
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+34A>G
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12874
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8689
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28982
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 6218
  bin: 9.75e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 39149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8987
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 2
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-90210800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210800
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210800
    reference: chr 15
allele count: 2
allele frequency: 1.652728655009421e-5
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+33C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+33C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+33C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 356
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

15-90210803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210803
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210803
    reference: chr 15
allele count: 2
allele frequency: 1.653165812530997e-5
allele num: 120980
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+30C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+30C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+30C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12863
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39458
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6001
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

15-90210804-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210804
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210804
    reference: chr 15
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+29C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+29C>T
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+29C>T
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29059
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39523
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5997
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

15-90210804-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90210804
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 90210804
    reference: chr 15
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000300055
  ensembl transcript: ENST00000300055
  gene symbol: PLIN1
  hgvsc: ENST00000300055.5:c.963+29C>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000453426
  ensembl transcript: ENST00000560330
  gene symbol: PLIN1
  hgvsc: ENST00000560330.1:c.39+29C>A
  variant of: http://identifiers.org/hgnc/9076
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166819
  ensembl protein: ENSP00000402167
  ensembl transcript: ENST00000430628
  gene symbol: PLIN1
  hgvsc: ENST00000430628.2:c.963+29C>A
  variant of: http://identifiers.org/hgnc/9076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39523
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 255
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 528
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 594
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2801
bin: 9.75e1
variant carriers: 907

GenotypeQuality
all individuals: 986
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 24764
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 2137
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 276
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 588
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3420
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 996
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 341
bin: 9.25e1
variant carriers: 7

South Asian
type: Population
allele count: 3
allele frequency: 1.911802192199847e-4
allele num: 15692
num of homozygotes: 0

African
type: Population
allele count: 840
allele frequency: 9.410710284561954e-2
allele num: 8926
num of homozygotes: 33

European (Non-Finnish)
type: Population
allele count: 70
allele frequency: 1.175719708421512e-3
allele num: 59538
num of homozygotes: 0

Latino
type: Population
allele count: 55
allele frequency: 5.175009409108017e-3
allele num: 10628
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.258178158027177e-4
allele num: 7948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5588
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.525252525252525e-3
allele num: 792
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.57e-2

FS
type: SiteQuality
SIO_000300: 7.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.16e-1

QD
type: SiteQuality
SIO_000300: 1.607e1

DP
type: SiteQuality
SIO_000300: 1.290623e6

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.129177958446251e-4
allele num: 8856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59348
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 1.279858e6

GenotypeQuality
all individuals: 996
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 696
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 409
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.397134083930399e-5
allele num: 15632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.369953494641774e-5
allele num: 59348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.37e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

DP
type: SiteQuality
SIO_000300: 1.279858e6

GenotypeQuality
all individuals: 654
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23357
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.689417488849845e-5
allele num: 59192
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.278281989006775e-4
allele num: 15646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.25711e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 3.38e0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 1.554e1

GenotypeQuality
all individuals: 1954
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13025
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.381119826886665e-5
allele num: 59152
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.285347043701799e-3
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.804402742692169e-4
allele num: 5542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.269357705001269e-4
allele num: 7878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

FS
type: SiteQuality
SIO_000300: 4.929e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.455e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

DP
type: SiteQuality
SIO_000300: 1.255187e6

GenotypeQuality
all individuals: 978
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.303101381287464e-4
allele num: 7674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.18887505188875e-5
allele num: 57816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.261e1

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.154448e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 800
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variant carriers: 0

GenotypeQuality
all individuals: 6790
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.18887505188875e-5
allele num: 57816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.476683937823834e-5
allele num: 15440
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.261e1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.154448e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1129
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GenotypeQuality
all individuals: 852
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.735026719411479e-5
allele num: 57636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.922594142259414e-4
allele num: 7648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.903e0

QD
type: SiteQuality
SIO_000300: 1.342e1

FS
type: SiteQuality
SIO_000300: 1.578e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 1.152322e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1928
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variant carriers: 0

GenotypeQuality
all individuals: 2625
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4056
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6728
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variant carriers: 0

GenotypeQuality
all individuals: 930
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variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.205080158234437e-5
allele num: 57636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.152322e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.903e0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 1.578e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.342e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

GenotypeQuality
all individuals: 1985
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 492
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.308557969118032e-4
allele num: 7642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.888e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.13011e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.96e-2

QD
type: SiteQuality
SIO_000300: 8.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7648
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.742706772158517e-5
allele num: 57382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.768e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.114844e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.344e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

QD
type: SiteQuality
SIO_000300: 1.533e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2085
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GenotypeQuality
all individuals: 6023
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.904912836767037e-5
allele num: 10096
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.08712e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.068e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.108e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

QD
type: SiteQuality
SIO_000300: 1.251e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1749
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GenotypeQuality
all individuals: 543
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.696129637069774e-5
allele num: 14934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.063197e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.99e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.844e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 769
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GenotypeQuality
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GenotypeQuality
all individuals: 437
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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QD
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ClippingRankSum
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FS
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.574757498048835e-5
allele num: 53814
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East Asian
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South Asian
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allele num: 14766
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Other
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FS
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MQRankSum
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BaseQRankSum
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DP
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 14630
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.578628268283441e-5
allele num: 52780
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African
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allele frequency: 1.330849081714134e-4
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East Asian
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allele frequency: 2.929115407147042e-4
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European (Finnish)
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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SIO_000300: -1.54e-1

InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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FS
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VQSLOD
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QD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

African
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 702
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4650
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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QD
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 6900
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele num: 7560
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
type: Population
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ClippingRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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African
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele num: 36150
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East Asian
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South Asian
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Latino
type: Population
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Other
type: Population
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MQ
type: SiteQuality
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DP
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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SIO_000300: 5.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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MQ
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DP
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MQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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South Asian
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MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.121e0

DP
type: SiteQuality
SIO_000300: 8.47589e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 1397
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 445
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37104
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.508750754375377e-4
allele num: 6628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8672
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.878e1

FS
type: SiteQuality
SIO_000300: 1.153e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.765e-1

DP
type: SiteQuality
SIO_000300: 8.58435e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.24e-1

QD
type: SiteQuality
SIO_000300: 8.82e0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.922e0

DP
type: SiteQuality
SIO_000300: 9.59149e5

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.617252931323283e-4
allele num: 38208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 9.51799e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

QD
type: SiteQuality
SIO_000300: 2.426e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1416
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variant carriers: 1

GenotypeQuality
all individuals: 1382
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.633519435373433e-5
allele num: 37972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.337e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 4.741e0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.543e0

DP
type: SiteQuality
SIO_000300: 9.45213e5

QD
type: SiteQuality
SIO_000300: 1.24e1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

GenotypeQuality
all individuals: 735
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.729108673107363e-5
allele num: 36642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 2.52e0

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 9.23684e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 6.009615384615385e-4
allele num: 3328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.76772140710624e-4
allele num: 33942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2098
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.598976654940838e-4
allele num: 6254
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.81563e5

QD
type: SiteQuality
SIO_000300: 9.65e0

VQSLOD
type: SiteQuality
SIO_000300: 6.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.047e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.47e-2

FS
type: SiteQuality
SIO_000300: 4.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.260610135305488e-4
allele num: 23798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1880
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.874e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.442e1

DP
type: SiteQuality
SIO_000300: 7.13987e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.78e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 159
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.49842555105713e-5
allele num: 22230
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.89e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.844e0

VQSLOD
type: SiteQuality
SIO_000300: -2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 6.89957e5

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.039983680130559e-4
allele num: 4902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.185e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 6.85874e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.039983680130559e-4
allele num: 4902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.185e0

DP
type: SiteQuality
SIO_000300: 6.85874e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.46e-2

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 16761
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16746
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 754
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Latino
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allele frequency: 1.048218029350105e-3
allele num: 954
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4200
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

DP
type: SiteQuality
SIO_000300: 5.91205e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.52134072823728e-5
allele num: 66352
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.536e0

FS
type: SiteQuality
SIO_000300: 2.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 2.3367e6

MQRankSum
type: SiteQuality
SIO_000300: -5.548e0

MQ
type: SiteQuality
SIO_000300: 5.493e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

QD
type: SiteQuality
SIO_000300: 8.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

GenotypeQuality
all individuals: 3074
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 4.552e0

QD
type: SiteQuality
SIO_000300: 1.246e1

DP
type: SiteQuality
SIO_000300: 2.33634e6

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015954398769491e-5
allele num: 66314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 2.336093e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.052e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8616
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.333691e6

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.303e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.509844184080203e-5
allele num: 66232
num of homozygotes: 0

East Asian
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Other
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South Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.109e1

FS
type: SiteQuality
SIO_000300: 1.2992e1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.332119e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele num: 11558
num of homozygotes: 0

African
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allele frequency: 9.769441187964049e-5
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num of homozygotes: 0

East Asian
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allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51437138443832e-5
allele num: 66034
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.323134e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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num of homozygotes: 0

South Asian
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East Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51758885482745e-5
allele num: 65894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
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allele num: 900
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Latino
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allele frequency: 3.461405330564209e-4
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.516944267467613e-4
allele num: 65922
num of homozygotes: 0

African
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East Asian
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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allele frequency: 9.811616954474098e-5
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Latino
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.401e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.528e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 2.319908e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.237e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 3702
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.552628384120432e-5
allele num: 65896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.964250638381458e-4
allele num: 10182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

FS
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 2.319492e6

GenotypeQuality
all individuals: 4058
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.823182711198428e-5
allele num: 10180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517404631118934e-5
allele num: 65902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

FS
type: SiteQuality
SIO_000300: 1.162e0

QD
type: SiteQuality
SIO_000300: 1.127e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.318774e6

GenotypeQuality
all individuals: 4058
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517404631118934e-5
allele num: 65902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.318774e6

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

FS
type: SiteQuality
SIO_000300: 1.162e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

QD
type: SiteQuality
SIO_000300: 1.127e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.976744186046512e-4
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.0790273556231e-5
allele num: 65800
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.068e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

FS
type: SiteQuality
SIO_000300: 1.836e0

DP
type: SiteQuality
SIO_000300: 2.31724e6

GenotypeQuality
all individuals: 2997
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.083650190114068e-5
allele num: 65750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

FS
type: SiteQuality
SIO_000300: 3.47e0

DP
type: SiteQuality
SIO_000300: 2.314578e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.202e0

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.567878677142335e-5
allele num: 65676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.793e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.009e0

MQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.02e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

DP
type: SiteQuality
SIO_000300: 2.312143e6

GenotypeQuality
all individuals: 12135
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.653327128897162e-4
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.042e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.349e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

DP
type: SiteQuality
SIO_000300: 2.309758e6

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.570244660430822e-5
allele num: 65642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.042e0

QD
type: SiteQuality
SIO_000300: 1.349e1

FS
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 2.309758e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 2.307135e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e0

QD
type: SiteQuality
SIO_000300: 1.117e1

VQSLOD
type: SiteQuality
SIO_000300: -1.519e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.619e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.954e0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.049989325037363e-5
allele num: 65574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.513035381750465e-3
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.236e1

FS
type: SiteQuality
SIO_000300: 6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 2.307969e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 4035
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526857422053929e-5
allele num: 65494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.764e0

MQRankSum
type: SiteQuality
SIO_000300: -2.059e0

QD
type: SiteQuality
SIO_000300: 1.509e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.322e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e0

DP
type: SiteQuality
SIO_000300: 2.303967e6

FS
type: SiteQuality
SIO_000300: 1.384e0

VQSLOD
type: SiteQuality
SIO_000300: -3.74e0

GenotypeQuality
all individuals: 23137
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527743827914935e-5
allele num: 65456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 2.300399e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4030
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529472943623627e-5
allele num: 65382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.179e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

DP
type: SiteQuality
SIO_000300: 2.296456e6

GenotypeQuality
all individuals: 25739
bin: 9.75e1
variant carriers: 5767

African
type: Population
allele count: 99
allele frequency: 9.86645405620889e-3
allele num: 10034
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European (Non-Finnish)
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allele frequency: 5.141502218142879e-2
allele num: 65370
num of homozygotes: 80

East Asian
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allele frequency: 8.278993945039591e-2
allele num: 8588
num of homozygotes: 18

South Asian
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allele frequency: 3.858286823586508e-2
allele num: 16484
num of homozygotes: 13

Latino
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allele frequency: 4.762317834836919e-2
allele num: 11528
num of homozygotes: 10

Other
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allele frequency: 6.081081081081081e-2
allele num: 888
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European (Finnish)
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allele frequency: 8.174261083743842e-2
allele num: 6496
num of homozygotes: 17

ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.531252871099133e-5
allele num: 65306
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Other
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allele frequency: 0.0e0
allele num: 888
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African
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11526
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6480
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South Asian
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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DP
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.214645150095436e-3
allele num: 11526
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South Asian
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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FS
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DP
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65100
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South Asian
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allele frequency: 6.067224851352991e-5
allele num: 16482
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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MQRankSum
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 3.08499151627333e-5
allele num: 64830
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South Asian
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Other
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African
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6454
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.54206760424377e-5
allele num: 64848
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.098085383233162e-5
allele num: 64556
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African
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allele frequency: 0.0e0
allele num: 9622
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.379e1

GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
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African
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allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 9.28965132842014e-5
allele num: 64588
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MQ
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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QD
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 4.500045000450004e-5
allele num: 66666
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East Asian
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Latino
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11548
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.156292156484872e-3
allele num: 10378
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66660
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Other
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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FS
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MQRankSum
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DP
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BaseQRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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Other
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500510173458976e-5
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South Asian
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East Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500690317546071e-5
allele num: 66636
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
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DP
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

Other
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Latino
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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VQSLOD
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QD
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

Other
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African
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allele frequency: 2.065238370970855e-2
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European (Finnish)
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Latino
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allele frequency: 1.5600624024961e-3
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European (Non-Finnish)
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South Asian
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East Asian
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

FS
type: SiteQuality
SIO_000300: 1.152e0

DP
type: SiteQuality
SIO_000300: 1.912219e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.87e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.014e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 9.74e0

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.861e0

MQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

FS
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.901615e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.333e0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00318337437684e-5
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.899506e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.79e-1

FS
type: SiteQuality
SIO_000300: 9.360000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 1651
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 1.742e0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.441e0

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 1.899249e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-3