http://identifiers.org/exac.variant/16-70211405-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211405
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211405
    reference: chr 16
allele count: 6
allele frequency: 1.98294665873488e-4
allele num: 30258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2464C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+22C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2464C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2464C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+22C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+22C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+22C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+22C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+22C>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25816
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24952
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

16-70211409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211409
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211409
    reference: chr 16
allele count: 3
allele frequency: 9.573653306101608e-5
allele num: 31336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+26C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+26C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2468C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+26C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2468C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2468C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+26C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+26C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+26C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-70211410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211410
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211410
    reference: chr 16
allele count: 2
allele frequency: 6.278252134605726e-5
allele num: 31856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+27G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2469G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+27G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+27G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+27G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2469G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+27G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2469G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+27G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

16-70211413-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211413
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211413
    reference: chr 16
allele count: 1
allele frequency: 3.06654400490647e-5
allele num: 32610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+30C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2472C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2472C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+30C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+30C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+30C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2472C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+30C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+30C>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

16-70211413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211413
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211413
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 32610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+30C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2472C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+30C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+30C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+30C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2472C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2472C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+30C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+30C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25988
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9855
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-70211415-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211415
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211415
    reference: chr 16
allele count: 1
allele frequency: 2.97938267191038e-5
allele num: 33564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2474A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2474A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+32A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2474A>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

16-70211424-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211424
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211424
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 36832
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+41A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2483A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+41A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2483A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+41A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2483A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+41A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+41A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+41A>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26024
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7725
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

16-70211427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70211427
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70211427
    reference: chr 16
allele count: 2
allele frequency: 5.270647762610025e-5
allele num: 37946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.649+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.456+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.456+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569268
  gene symbol: CLEC18C
  hgvsc: ENST00000569268.1:n.395+2486C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.456+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.456+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.710+44C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000456676
  ensembl transcript: ENST00000562923
  gene symbol: CLEC18C
  hgvsc: ENST00000562923.1:c.216+2486C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000561612
  gene symbol: CLEC18C
  hgvsc: ENST00000561612.1:n.654+2486C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

16-70219532-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219532
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219532
    reference: chr 16
allele count: 11
allele frequency: 3.235294117647059e-1
allele num: 34
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-256G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-256G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1212-19G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-256G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-256G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-256G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.5e0
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 7.5e0
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

16-70219537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219537
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219537
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 56
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-251C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-251C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1212-14C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-251C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-251C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-251C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

16-70219576-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219576
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219576
    reference: chr 16
allele count: 2
allele frequency: 1.612903225806452e-2
allele num: 124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-212G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1237G>T
  hgvsp: ENSP00000444726.2:p.Gly413Trp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-212G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-212G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-212G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-212G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly413Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-70219593-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219593
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219594
    reference: chr 16
allele count: 2
allele frequency: 1.149425287356322e-2
allele num: 174
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-191dupC
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1238+20dupC
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-191dupC
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-191dupC
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-191dupC
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-191dupC
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6779
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-70219737-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219737
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219737
    reference: chr 16
allele count: 3
allele frequency: 3.325647392692444e-5
allele num: 90208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-51C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-51C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-51C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-51C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-51C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-51C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4503
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4905
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7661
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

16-70219738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219738
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219738
    reference: chr 16
allele count: 7
allele frequency: 7.743534148985597e-5
allele num: 90398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-50G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-50G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-50G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-50G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-50G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-50G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7959
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4505
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 8146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5009
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

16-70219749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219749
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219749
    reference: chr 16
allele count: 1
allele frequency: 1.107763204537398e-5
allele num: 90272
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-39T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-39T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-39T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-39T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-39T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-39T>C
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5566
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP

16-70219752-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219752
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219752
    reference: chr 16
allele count: 1
allele frequency: 1.109631602308034e-5
allele num: 90120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-36A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-36A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-36A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-36A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-36A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-36A>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5666
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/16-70219759-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219759
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219759
    reference: chr 16
allele count: 7
allele frequency: 7.839799301137891e-5
allele num: 89288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-29C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-29C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-29C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-29C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-29C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-29C>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5624
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5763
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

16-70219767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219767
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219767
    reference: chr 16
allele count: 2
allele frequency: 2.250832808139011e-5
allele num: 88856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-21C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-21C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-21C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-21C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-21C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-21C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

16-70219770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219770
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219770
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 89314
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-18C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-18C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-18C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-18C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-18C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-18C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5860
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-70219777-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219777
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219777
    reference: chr 16
allele count: 19259
allele frequency: 2.525505520732251e-1
allele num: 76258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-11A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-11A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-11A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-11A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-11A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-11A>C
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 3.75e1
  variant carriers: 1527
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 5.25e1
  variant carriers: 609
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 360
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 1.75e1
  variant carriers: 1910
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 1937
genotype depth: GenotypeDepth
  all individuals: 7830
  bin: 2.75e1
  variant carriers: 1998
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 7.5e0
  variant carriers: 6888
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 1.25e1
  variant carriers: 3874
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.25e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 9.75e1
  variant carriers: 756
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 4.25e1
  variant carriers: 1227
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 3.25e1
  variant carriers: 1934
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 2.5e0
  variant carriers: 2266
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 4.75e1
  variant carriers: 830
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 5.25e1
  variant carriers: 799
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 3.25e1
  variant carriers: 2083
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 2.75e1
  variant carriers: 1612
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 4.25e1
  variant carriers: 939
genotype quality: GenotypeQuality
  all individuals: 4080
  bin: 1.75e1
  variant carriers: 3390
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 8.25e1
  variant carriers: 385
genotype quality: GenotypeQuality
  all individuals: 3083
  bin: 7.5e0
  variant carriers: 2113
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 6.75e1
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 5.75e1
  variant carriers: 639
genotype quality: GenotypeQuality
  all individuals: 4744
  bin: 9.75e1
  variant carriers: 3775
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 8.75e1
  variant carriers: 349
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 3.75e1
  variant carriers: 1510
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 1080
num of homozygotes: 4309
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-70219779-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219779
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219779
    reference: chr 16
allele count: 1
allele frequency: 1.015166588837228e-5
allele num: 98506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-9G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-9G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-9G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-9G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-9G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-9G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22613
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6733
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4750
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

16-70219784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219784
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219784
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 99518
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-4G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-4G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-4G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-4G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-4G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-4G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7076
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1212-4G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

16-70219786-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219786
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219786
    reference: chr 16
allele count: 4
allele frequency: 3.949759064697053e-5
allele num: 101272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372-2A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212-2A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239-2A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690-2A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212-2A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212-2A>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12066
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 28346
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1212-2A>G
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

16-70219788-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219788
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219788
    reference: chr 16
allele count: 1
allele frequency: 9.644503597399841e-6
allele num: 103686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2372G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1212G>T
  hgvsp: ENST00000541793.2:c.1212G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1239G>T
  hgvsp: ENST00000536907.2:c.1239G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1212G>T
  hgvsp: ENST00000569347.2:c.1212G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1212G>T
  hgvsp: ENST00000314151.8:c.1212G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2690G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29975
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7837
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1212G>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

16-70219792-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219792
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219792
    reference: chr 16
allele count: 1
allele frequency: 9.339858781335226e-6
allele num: 107068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1216G>T
  hgvsp: ENSP00000444875.2:p.Gly406Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1216G>T
  hgvsp: ENSP00000455920.2:p.Gly406Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1216G>T
  hgvsp: ENSP00000326538.8:p.Gly406Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2376G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1243G>T
  hgvsp: ENSP00000444726.2:p.Gly415Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2694G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12477
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly406Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

16-70219797-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219797
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219797
    reference: chr 16
allele count: 1
allele frequency: 8.97778895013736e-6
allele num: 111386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1248C>G
  hgvsp: ENSP00000444726.2:p.Asn416Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2381C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1221C>G
  hgvsp: ENSP00000455920.2:p.Asn407Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1221C>G
  hgvsp: ENSP00000444875.2:p.Asn407Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1221C>G
  hgvsp: ENSP00000326538.8:p.Asn407Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2699C>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8440
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn407Lys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

16-70219799-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219799
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219799
    reference: chr 16
allele count: 1
allele frequency: 8.875319511502414e-6
allele num: 112672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2701G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1250G>T
  hgvsp: ENSP00000444726.2:p.Cys417Phe
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1223G>T
  hgvsp: ENSP00000455920.2:p.Cys408Phe
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1223G>T
  hgvsp: ENSP00000444875.2:p.Cys408Phe
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1223G>T
  hgvsp: ENSP00000326538.8:p.Cys408Phe
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2383G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21008
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys408Phe
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

16-70219800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219800
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219800
    reference: chr 16
allele count: 4
allele frequency: 3.535317825072474e-5
allele num: 113144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2384C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1224C>T
  hgvsp: ENST00000541793.2:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2702C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1251C>T
  hgvsp: ENST00000536907.2:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1224C>T
  hgvsp: ENST00000314151.8:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1224C>T
  hgvsp: ENST00000569347.2:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4012
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys408Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

16-70219801-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219801
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219801
    reference: chr 16
allele count: 6
allele frequency: 5.261127284206096e-5
allele num: 114044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1225G>A
  hgvsp: ENSP00000326538.8:p.Val409Met
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1225G>A
  hgvsp: ENSP00000444875.2:p.Val409Met
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1225G>A
  hgvsp: ENSP00000455920.2:p.Val409Met
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2703G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2385G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1252G>A
  hgvsp: ENSP00000444726.2:p.Val418Met
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val409Met
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

16-70219809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219809
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219809
    reference: chr 16
allele count: 1
allele frequency: 8.582954252853832e-6
allele num: 116510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1260G>A
  hgvsp: ENST00000536907.2:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2711G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1233G>A
  hgvsp: ENST00000314151.8:c.1233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1233G>A
  hgvsp: ENST00000541793.2:c.1233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2393G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1233G>A
  hgvsp: ENST00000569347.2:c.1233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu411Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

16-70219818-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219818
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219818
    reference: chr 16
allele count: 1
allele frequency: 8.459950593888532e-6
allele num: 118204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1242A>T
  hgvsp: ENST00000314151.8:c.1242A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1242A>T
  hgvsp: ENST00000541793.2:c.1242A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1242A>T
  hgvsp: ENST00000569347.2:c.1242A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2402A>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2720A>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1269A>T
  hgvsp: ENST00000536907.2:c.1269A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8758
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser414Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

16-70219829-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219829
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219829
    reference: chr 16
allele count: 2
allele frequency: 1.681180861437073e-5
allele num: 118964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1253A>G
  hgvsp: ENSP00000326538.8:p.Asn418Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2413A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1253A>G
  hgvsp: ENSP00000455920.2:p.Asn418Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1253A>G
  hgvsp: ENSP00000444875.2:p.Asn418Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1280A>G
  hgvsp: ENSP00000444726.2:p.Asn427Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2731A>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn418Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-70219832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219832
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219832
    reference: chr 16
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1256G>A
  hgvsp: ENSP00000326538.8:p.Trp419Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2416G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1283G>A
  hgvsp: ENSP00000444726.2:p.Trp428Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1256G>A
  hgvsp: ENSP00000455920.2:p.Trp419Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1256G>A
  hgvsp: ENSP00000444875.2:p.Trp419Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2734G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13853
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Trp419Ter
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

16-70219833-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219833
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219833
    reference: chr 16
allele count: 1
allele frequency: 8.398138972403716e-6
allele num: 119074
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1257G>C
  hgvsp: ENSP00000455920.2:p.Trp419Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2735G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2417G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1257G>C
  hgvsp: ENSP00000326538.8:p.Trp419Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1257G>C
  hgvsp: ENSP00000444875.2:p.Trp419Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1284G>C
  hgvsp: ENSP00000444726.2:p.Trp428Cys
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39212
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Trp419Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

16-70219836-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219836
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219836
    reference: chr 16
allele count: 1
allele frequency: 8.394473078924836e-6
allele num: 119126
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1260C>G
  hgvsp: ENSP00000444875.2:p.Asn420Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2738C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1287C>G
  hgvsp: ENSP00000444726.2:p.Asn429Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1260C>G
  hgvsp: ENSP00000326538.8:p.Asn420Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1260C>G
  hgvsp: ENSP00000455920.2:p.Asn420Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2420C>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn420Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

16-70219836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219836
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219836
    reference: chr 16
allele count: 1
allele frequency: 8.394473078924836e-6
allele num: 119126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1260C>T
  hgvsp: ENST00000314151.8:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1287C>T
  hgvsp: ENST00000536907.2:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1260C>T
  hgvsp: ENST00000541793.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2420C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1260C>T
  hgvsp: ENST00000569347.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2738C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn420Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-70219837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219837
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219837
    reference: chr 16
allele count: 1
allele frequency: 8.393345755485052e-6
allele num: 119142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1288A>G
  hgvsp: ENSP00000444726.2:p.Asn430Asp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1261A>G
  hgvsp: ENSP00000326538.8:p.Asn421Asp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2421A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2739A>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1261A>G
  hgvsp: ENSP00000455920.2:p.Asn421Asp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1261A>G
  hgvsp: ENSP00000444875.2:p.Asn421Asp
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn421Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/16-70219839-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219839
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219839
    reference: chr 16
allele count: 1
allele frequency: 8.391796180054379e-6
allele num: 119164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1263C>A
  hgvsp: ENSP00000455920.2:p.Asn421Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1263C>A
  hgvsp: ENSP00000444875.2:p.Asn421Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2423C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2741C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1263C>A
  hgvsp: ENSP00000326538.8:p.Asn421Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1290C>A
  hgvsp: ENSP00000444726.2:p.Asn430Lys
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn421Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

16-70219843-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219843
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219843
    reference: chr 16
allele count: 7
allele frequency: 5.872384691532022e-5
allele num: 119202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1267C>T
  hgvsp: ENSP00000444875.2:p.Arg423Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2427C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2745C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1267C>T
  hgvsp: ENSP00000326538.8:p.Arg423Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1294C>T
  hgvsp: ENSP00000444726.2:p.Arg432Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1267C>T
  hgvsp: ENSP00000455920.2:p.Arg423Cys
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13909
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39259
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg423Cys
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

16-70219844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219844
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219844
    reference: chr 16
allele count: 6
allele frequency: 5.032712632108707e-5
allele num: 119220
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1268G>A
  hgvsp: ENSP00000455920.2:p.Arg423His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2428G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2746G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1268G>A
  hgvsp: ENSP00000326538.8:p.Arg423His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1295G>A
  hgvsp: ENSP00000444726.2:p.Arg432His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1268G>A
  hgvsp: ENSP00000444875.2:p.Arg423His
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg423His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-70219854-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219854
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219854
    reference: chr 16
allele count: 8
allele frequency: 6.707807888382076e-5
allele num: 119264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1278C>G
  hgvsp: ENST00000541793.2:c.1278C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1305C>G
  hgvsp: ENST00000536907.2:c.1305C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2438C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2756C>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1278C>G
  hgvsp: ENST00000569347.2:c.1278C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1278C>G
  hgvsp: ENST00000314151.8:c.1278C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr426Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-70219854-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219854
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219854
    reference: chr 16
allele count: 1
allele frequency: 8.384759860477596e-6
allele num: 119264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2438C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1278C>A
  hgvsp: ENST00000314151.8:c.1278C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1305C>A
  hgvsp: ENST00000536907.2:c.1305C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2756C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1278C>A
  hgvsp: ENST00000541793.2:c.1278C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1278C>A
  hgvsp: ENST00000569347.2:c.1278C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr426Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

16-70219855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219855
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219855
    reference: chr 16
allele count: 2
allele frequency: 1.677064466358087e-5
allele num: 119256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1306C>T
  hgvsp: ENSP00000444726.2:p.Arg436Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2439C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1279C>T
  hgvsp: ENSP00000455920.2:p.Arg427Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2757C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1279C>T
  hgvsp: ENSP00000326538.8:p.Arg427Ter
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1279C>T
  hgvsp: ENSP00000444875.2:p.Arg427Ter
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg427Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-70219856-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219856
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219856
    reference: chr 16
allele count: 3
allele frequency: 2.51563888842303e-5
allele num: 119254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1307G>A
  hgvsp: ENSP00000444726.2:p.Arg436Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1280G>A
  hgvsp: ENSP00000326538.8:p.Arg427Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1280G>A
  hgvsp: ENSP00000444875.2:p.Arg427Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2440G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1280G>A
  hgvsp: ENSP00000455920.2:p.Arg427Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2758G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8805
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg427Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-70219860-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219860
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219860
    reference: chr 16
allele count: 1
allele frequency: 8.387432271484408e-6
allele num: 119226
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1284C>A
  hgvsp: ENSP00000455920.2:p.Asn428Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1284C>A
  hgvsp: ENSP00000444875.2:p.Asn428Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2444C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2762C>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1284C>A
  hgvsp: ENSP00000326538.8:p.Asn428Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1311C>A
  hgvsp: ENSP00000444726.2:p.Asn437Lys
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn428Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-70219860-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219860
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219860
    reference: chr 16
allele count: 109
allele frequency: 9.142301175918005e-4
allele num: 119226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2444C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1311C>T
  hgvsp: ENST00000536907.2:c.1311C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1284C>T
  hgvsp: ENST00000541793.2:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1284C>T
  hgvsp: ENST00000569347.2:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2762C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1284C>T
  hgvsp: ENST00000314151.8:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13962
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4098
  bin: 9.75e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8785
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn428Asn
num of homozygotes: 1
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

16-70219861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219861
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219861
    reference: chr 16
allele count: 105
allele frequency: 8.807247106190236e-4
allele num: 119220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2445C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1312C>T
  hgvsp: ENSP00000444726.2:p.Arg438Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1285C>T
  hgvsp: ENSP00000444875.2:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1285C>T
  hgvsp: ENSP00000326538.8:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1285C>T
  hgvsp: ENSP00000455920.2:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2763C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23592
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13983
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4095
  bin: 9.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8784
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg429Cys
num of homozygotes: 2
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

16-70219862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219862
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219862
    reference: chr 16
allele count: 18
allele frequency: 1.509940441238151e-4
allele num: 119210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2764G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1286G>A
  hgvsp: ENSP00000326538.8:p.Arg429His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1286G>A
  hgvsp: ENSP00000444875.2:p.Arg429His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1313G>A
  hgvsp: ENSP00000444726.2:p.Arg438His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1286G>A
  hgvsp: ENSP00000455920.2:p.Arg429His
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2446G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39031
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg429His
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-70219866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219866
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219866
    reference: chr 16
allele count: 1
allele frequency: 8.388839487945237e-6
allele num: 119206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1290C>T
  hgvsp: ENST00000314151.8:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2768C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1290C>T
  hgvsp: ENST00000569347.2:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2450C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1290C>T
  hgvsp: ENST00000541793.2:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1317C>T
  hgvsp: ENST00000536907.2:c.1317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23453
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr430Tyr
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-70219874-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219874
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219874
    reference: chr 16
allele count: 1
allele frequency: 8.399690891375198e-6
allele num: 119052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1298A>C
  hgvsp: ENSP00000326538.8:p.Gln433Pro
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1298A>C
  hgvsp: ENSP00000455920.2:p.Gln433Pro
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1325A>C
  hgvsp: ENSP00000444726.2:p.Gln442Pro
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2776A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2458A>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1298A>C
  hgvsp: ENSP00000444875.2:p.Gln433Pro
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln433Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-70219875-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219875
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219875
    reference: chr 16
allele count: 2
allele frequency: 1.681152598221341e-5
allele num: 118966
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1299G>A
  hgvsp: ENST00000569347.2:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2777G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1299G>A
  hgvsp: ENST00000314151.8:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1326G>A
  hgvsp: ENST00000536907.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1299G>A
  hgvsp: ENST00000541793.2:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2459G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln433Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-70219883-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219883
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219882
    reference: chr 16
allele count: 2
allele frequency: 1.686312203841419e-5
allele num: 118602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+7delG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+7delG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+7delG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+7delG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+7delG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+7delG
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1303+7delG
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: AG
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-70219893-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219893
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219893
    reference: chr 16
allele count: 1
allele frequency: 8.539126276599378e-6
allele num: 117108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+14T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+14T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+14T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+14T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+14T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+14T>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8032
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34822
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

16-70219894-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219894
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219894
    reference: chr 16
allele count: 17
allele frequency: 1.45577858464068e-4
allele num: 116776
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+15G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+15G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+15G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+15G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+15G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+15G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7509
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

16-70219894-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219894
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219894
    reference: chr 16
allele count: 35
allele frequency: 2.997191203671987e-4
allele num: 116776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+15G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+15G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+15G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+15G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+15G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+15G>C
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7509
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4032
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 2.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-70219913-C-CTCTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219913
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219917
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 100624
alternate allele: CTCTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+35_2463+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+35_1303+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+35_2781+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+35_1303+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+35_1330+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+35_1303+38dupTCTG
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3954
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5769
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

16-70219914-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219914
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219914
    reference: chr 16
allele count: 857
allele frequency: 8.623812590565126e-3
allele num: 99376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+35T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+35T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+35T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+35T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+35T>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+35T>C
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 7.5e0
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 1.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 3.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 2.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 18043
  bin: 2.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 9502
  bin: 2.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8058
  bin: 1.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 9.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 7.5e0
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 7.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 2.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 9.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 22777
  bin: 6.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 7.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 3577
  bin: 3.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 4.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 3.75e1
  variant carriers: 54
num of homozygotes: 198
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

16-70219920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219920
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219920
    reference: chr 16
allele count: 1
allele frequency: 1.003391463145432e-5
allele num: 99662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+41C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+41C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+41C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+41C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+41C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+41C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

16-70219926-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70219926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70219926
    reference: chr 16
allele count: 2
allele frequency: 2.029756226277224e-5
allele num: 98534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1303+47G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1303+47G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1330+47G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2781+47G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2463+47G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1303+47G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7904
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

16-70220341-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220341
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220341
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 1148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1304-45T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2464-45T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1304-45T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2782-45T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1304-45T>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1331-45T>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18321
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9748
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-70220391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220391
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220391
    reference: chr 16
allele count: 46
allele frequency: 2.147525676937442e-2
allele num: 2142
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1309G>A
  hgvsp: ENSP00000455920.2:p.Glu437Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1309G>A
  hgvsp: ENSP00000326538.8:p.Glu437Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1309G>A
  hgvsp: ENSP00000444875.2:p.Glu437Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1336G>A
  hgvsp: ENSP00000444726.2:p.Glu446Lys
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2787G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2469G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 7.5e0
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28476
  bin: 2.5e0
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 25363
  bin: 7.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 2.25e1
  variant carriers: 4
hgvs: p.Glu437Lys
num of homozygotes: 9
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-70220403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220403
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220403
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2799C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1321C>T
  hgvsp: ENSP00000455920.2:p.Arg441Trp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1321C>T
  hgvsp: ENSP00000444875.2:p.Arg441Trp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1321C>T
  hgvsp: ENSP00000326538.8:p.Arg441Trp
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2481C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1348C>T
  hgvsp: ENSP00000444726.2:p.Arg450Trp
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28664
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg441Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS

16-70220404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220404
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220404
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1349G>A
  hgvsp: ENSP00000444726.2:p.Arg450Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1322G>A
  hgvsp: ENSP00000455920.2:p.Arg441Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2800G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1322G>A
  hgvsp: ENSP00000326538.8:p.Arg441Gln
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2482G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1322G>A
  hgvsp: ENSP00000444875.2:p.Arg441Gln
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28738
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24265
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Arg441Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

16-70220412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220412
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220412
    reference: chr 16
allele count: 1
allele frequency: 1.883239171374765e-4
allele num: 5310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1357C>T
  hgvsp: ENSP00000444726.2:p.Pro453Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1330C>T
  hgvsp: ENSP00000444875.2:p.Pro444Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2490C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2808C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1330C>T
  hgvsp: ENSP00000326538.8:p.Pro444Ser
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1330C>T
  hgvsp: ENSP00000455920.2:p.Pro444Ser
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28144
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27065
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14817
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro444Ser
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-70220416-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220416
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220416
    reference: chr 16
allele count: 1
allele frequency: 1.309929263819754e-4
allele num: 7634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1334G>C
  hgvsp: ENSP00000444875.2:p.Gly445Ala
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1334G>C
  hgvsp: ENSP00000326538.8:p.Gly445Ala
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1334G>C
  hgvsp: ENSP00000455920.2:p.Gly445Ala
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2812G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1361G>C
  hgvsp: ENSP00000444726.2:p.Gly454Ala
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2494G>C
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly445Ala
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

16-70220422-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220422
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220422
    reference: chr 16
allele count: 1
allele frequency: 7.753140021708792e-5
allele num: 12898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.1340G>C
  hgvsp: ENSP00000326538.8:p.Ter447SerextTer57
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.1340G>C
  hgvsp: ENSP00000455920.2:p.Ter447SerextTer57
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2500G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2818G>C
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.1367G>C
  hgvsp: ENSP00000444726.2:p.Ter456SerextTer57
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.1340G>C
  hgvsp: ENSP00000444875.2:p.Ter447SerextTer57
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: stop lost
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16495
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ter447SerextTer57
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-70220431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220431
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220431
    reference: chr 16
allele count: 2
allele frequency: 9.320533134495293e-5
allele num: 21458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2509C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*8C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*8C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2827C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*8C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*8C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28704
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11624
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6816
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11194
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 753
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

16-70220438-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220438
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220438
    reference: chr 16
allele count: 3
allele frequency: 1.037559659680432e-4
allele num: 28914
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*15G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*15G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2516G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*15G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*15G>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2834G>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9008
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

16-70220445-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220445
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220445
    reference: chr 16
allele count: 1
allele frequency: 2.770850651149903e-5
allele num: 36090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2523C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*22C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2841C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

16-70220449-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220449
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220449
    reference: chr 16
allele count: 2
allele frequency: 4.897879218298477e-5
allele num: 40834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*26T>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2845T>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*26T>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2527T>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*26T>G
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*26T>G
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25092
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD

16-70220451-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220451
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220451
    reference: chr 16
allele count: 1
allele frequency: 2.312352587522545e-5
allele num: 43246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*28C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2847C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2529C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-70220452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220452
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220452
    reference: chr 16
allele count: 33
allele frequency: 7.426745285142009e-4
allele num: 44434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2530C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*29C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*29C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*29C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2848C>T
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*29C>T
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16888
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 25047
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15080
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4992
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 8
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

16-70220459-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70220459
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 70220459
    reference: chr 16
allele count: 34
allele frequency: 6.809806120813973e-4
allele num: 49928
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000455920
  ensembl transcript: ENST00000569347
  gene symbol: CLEC18C
  hgvsc: ENST00000569347.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000569201
  gene symbol: CLEC18C
  hgvsc: ENST00000569201.2:n.2855G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157335
  ensembl transcript: ENST00000564976
  gene symbol: CLEC18C
  hgvsc: ENST00000564976.1:n.2537G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000326538
  ensembl transcript: ENST00000314151
  gene symbol: CLEC18C
  hgvsc: ENST00000314151.8:c.*36G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444875
  ensembl transcript: ENST00000541793
  gene symbol: CLEC18C
  hgvsc: ENST00000541793.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/28538
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000157335
  ensembl protein: ENSP00000444726
  ensembl transcript: ENST00000536907
  gene symbol: CLEC18C
  hgvsc: ENST00000536907.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/28538
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 3
reference allele: G

GenotypeQuality
all individuals: 11383
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 337
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 3.144654088050315e-3
allele num: 1908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.42987e5

VQSLOD
type: SiteQuality
SIO_000300: -4.242e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQ
type: SiteQuality
SIO_000300: 3.085e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

QD
type: SiteQuality
SIO_000300: 6.82e0

GenotypeQuality
all individuals: 345
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10675
bin: 7.5e0
variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 632
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.274534794799898e-4
allele num: 15692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.970178926441351e-4
allele num: 2012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2072
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -6.641e0

QD
type: SiteQuality
SIO_000300: 6.45e0

FS
type: SiteQuality
SIO_000300: 5.744e0

DP
type: SiteQuality
SIO_000300: 5.54389e5

MQ
type: SiteQuality
SIO_000300: 2.3e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10546
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1631
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2750
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.234567901234568e-4
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.253908692933083e-5
allele num: 15990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
type: SiteQuality
SIO_000300: 1.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQ
type: SiteQuality
SIO_000300: 3.496e1

VQSLOD
type: SiteQuality
SIO_000300: -2.705e0

DP
type: SiteQuality
SIO_000300: 5.57643e5

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 981
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9855
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
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variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.708097928436911e-4
allele num: 2124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.364e1

VQSLOD
type: SiteQuality
SIO_000300: -3.411e0

FS
type: SiteQuality
SIO_000300: 6.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 5.65731e5

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.687e1

GenotypeQuality
all individuals: 438
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25204
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 981
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.687e1

FS
type: SiteQuality
SIO_000300: 6.64e0

DP
type: SiteQuality
SIO_000300: 5.65731e5

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.411e0

QD
type: SiteQuality
SIO_000300: 1.364e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 462
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9544
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.932605600379687e-5
allele num: 16856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.082e0

VQSLOD
type: SiteQuality
SIO_000300: -5.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.024e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 2.0373e1

DP
type: SiteQuality
SIO_000300: 5.71917e5

MQ
type: SiteQuality
SIO_000300: 3.462e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.763e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7796
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
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GenotypeQuality
all individuals: 534
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 380
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.68e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.219e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 2.703e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

DP
type: SiteQuality
SIO_000300: 6.02744e5

GenotypeQuality
all individuals: 7093
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.25e1
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GenotypeQuality
all individuals: 1323
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
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variant carriers: 2

GenotypeQuality
all individuals: 1677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
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GenotypeQuality
all individuals: 122
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variant carriers: 0

GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 302
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variant carriers: 0

GenotypeQuality
all individuals: 8329
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3306
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.396449704142012e-4
allele num: 2704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2534
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

MQRankSum
type: SiteQuality
SIO_000300: -9.98e-1

DP
type: SiteQuality
SIO_000300: 6.1546e5

FS
type: SiteQuality
SIO_000300: 3.79e0

QD
type: SiteQuality
SIO_000300: 3.77e0

VQSLOD
type: SiteQuality
SIO_000300: -4.545e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 3.185e1

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 39

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 38

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 4.285714285714285e-1
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.5e-1
allele num: 12
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.402e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.537e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.86e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Other
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.85e-2

MQ
type: SiteQuality
SIO_000300: 2.956e1

DP
type: SiteQuality
SIO_000300: 7.335e3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.435e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.333333333333333e-1
allele num: 6
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 2
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 38
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East Asian
type: Population
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.77e-2

VQSLOD
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FS
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 2
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
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Latino
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allele frequency: 0.0e0
allele num: 30
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East Asian
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allele frequency: 0.0e0
allele num: 4
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.25e-2
allele num: 80
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.851851851851852e-2
allele num: 54
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.3e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.59e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.528e-1

FS
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

DP
type: SiteQuality
SIO_000300: 2.0814e4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.14e-1

QD
type: SiteQuality
SIO_000300: 1.822e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.560112499554986e-5
allele num: 56178
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3042
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3764
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.193e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.32e-1

DP
type: SiteQuality
SIO_000300: 1.386533e6

MQ
type: SiteQuality
SIO_000300: 3.072e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2007
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.066060196865783e-4
allele num: 56282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.911392405063291e-5
allele num: 12640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3034
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

QD
type: SiteQuality
SIO_000300: 7.89e0

DP
type: SiteQuality
SIO_000300: 1.390531e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 3.551e1

VQSLOD
type: SiteQuality
SIO_000300: -2.519e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1666
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GenotypeQuality
all individuals: 900
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.951653944020357e-5
allele num: 12576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56372
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.262e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.354e0

QD
type: SiteQuality
SIO_000300: 6.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 3.06e1

FS
type: SiteQuality
SIO_000300: 2.255e0

DP
type: SiteQuality
SIO_000300: 1.390336e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 15014
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GenotypeQuality
all individuals: 993
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.775946579526888e-5
allele num: 56308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.321e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 2.256e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.02e-2

QD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5510
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.866969500324465e-4
allele num: 12328
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56010
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.206854936036688e-4
allele num: 8286
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

DP
type: SiteQuality
SIO_000300: 1.384751e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.678e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.276e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
all individuals: 828
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1633
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3288
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.118201006656925e-5
allele num: 12318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.788652786721042e-5
allele num: 55908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.825e1

VQSLOD
type: SiteQuality
SIO_000300: -5.773e0

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 2.372e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

DP
type: SiteQuality
SIO_000300: 1.403691e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.187e0

GenotypeQuality
all individuals: 1969
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18100
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GenotypeQuality
all individuals: 934
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GenotypeQuality
all individuals: 2518
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GenotypeQuality
all individuals: 4524
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.041e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 3.393e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.418693e6

GenotypeQuality
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variant carriers: 325

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 830

GenotypeQuality
all individuals: 1361
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variant carriers: 443

GenotypeQuality
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variant carriers: 463

GenotypeQuality
all individuals: 12418
bin: 6.25e1
variant carriers: 669

GenotypeQuality
all individuals: 2963
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variant carriers: 2227

Other
type: Population
allele count: 157
allele frequency: 2.540453074433657e-1
allele num: 618
num of homozygotes: 35

South Asian
type: Population
allele count: 4120
allele frequency: 3.739335632601198e-1
allele num: 11018
num of homozygotes: 1047

Latino
type: Population
allele count: 1531
allele frequency: 2.264123040520556e-1
allele num: 6762
num of homozygotes: 226

East Asian
type: Population
allele count: 1767
allele frequency: 6.148225469728601e-1
allele num: 2874
num of homozygotes: 726

European (Non-Finnish)
type: Population
allele count: 9060
allele frequency: 1.92006103505277e-1
allele num: 47186
num of homozygotes: 1388

European (Finnish)
type: Population
allele count: 742
allele frequency: 1.628621597892889e-1
allele num: 4556
num of homozygotes: 73

African
type: Population
allele count: 1882
allele frequency: 5.801479654747226e-1
allele num: 3244
num of homozygotes: 814

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 2.2583e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.247e0

MQ
type: SiteQuality
SIO_000300: 2.827e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 3.849e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.635e-1

QD
type: SiteQuality
SIO_000300: 7.38e0

DP
type: SiteQuality
SIO_000300: 1.766316e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.671458180116333e-5
allele num: 59828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14172
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

FS
type: SiteQuality
SIO_000300: 1.922e0

MQ
type: SiteQuality
SIO_000300: 3.683e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.602809e6

VQSLOD
type: SiteQuality
SIO_000300: -3.592e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

QD
type: SiteQuality
SIO_000300: 4.28e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7261
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4346
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.641177e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 3.365e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.112e0

QD
type: SiteQuality
SIO_000300: 1.555e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 568
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variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.595000989250148e-5
allele num: 60652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.774e0

FS
type: SiteQuality
SIO_000300: 3.985e0

DP
type: SiteQuality
SIO_000300: 1.673429e6

QD
type: SiteQuality
SIO_000300: 1.498e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 3.751e1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 1090
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
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variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.736728644570196e-5
allele num: 14844
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.391e0

QD
type: SiteQuality
SIO_000300: 3.36e0

MQ
type: SiteQuality
SIO_000300: 3.668e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 1.916e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.101e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.569e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 1.689536e6

GenotypeQuality
all individuals: 8128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 791
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variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.808318264014467e-4
allele num: 5530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.867e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQ
type: SiteQuality
SIO_000300: 3.294e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.675e0

QD
type: SiteQuality
SIO_000300: 3.95e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.726358e6

VQSLOD
type: SiteQuality
SIO_000300: -4.784e0

GenotypeQuality
all individuals: 599
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
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variant carriers: 0

GenotypeQuality
all individuals: 135
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variant carriers: 0

GenotypeQuality
all individuals: 34681
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variant carriers: 0

GenotypeQuality
all individuals: 1387
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variant carriers: 0

GenotypeQuality
all individuals: 807
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GenotypeQuality
all individuals: 2313
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544735541275334e-5
allele num: 64736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

FS
type: SiteQuality
SIO_000300: 2.526e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.74e-1

MQ
type: SiteQuality
SIO_000300: 3.499e1

QD
type: SiteQuality
SIO_000300: 1.412e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -3.609e0

DP
type: SiteQuality
SIO_000300: 1.769326e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 808
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GenotypeQuality
all individuals: 4010
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
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African
type: Population
allele count: 1
allele frequency: 1.463271875914545e-4
allele num: 6834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.646e0

MQ
type: SiteQuality
SIO_000300: 3.382e1

VQSLOD
type: SiteQuality
SIO_000300: -5.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.324e0

DP
type: SiteQuality
SIO_000300: 1.781153e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.130831953896144e-5
allele num: 65244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.173e0

MQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.185e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 6836
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.963786303334529e-5
allele num: 11156
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6432
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.632888590358135e-5
allele num: 65506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

FS
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 3.338e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.794017e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 807
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 3.063e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.378e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.21e-1

DP
type: SiteQuality
SIO_000300: 1.815502e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: -4.233e0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 609
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 5.93e0

DP
type: SiteQuality
SIO_000300: 1.82976e6

VQSLOD
type: SiteQuality
SIO_000300: -3.613e0

MQRankSum
type: SiteQuality
SIO_000300: -1.764e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 3.618e1

FS
type: SiteQuality
SIO_000300: 3.774e0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8797
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005891547432969e-5
allele num: 66536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

FS
type: SiteQuality
SIO_000300: 4.024e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.56e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

MQ
type: SiteQuality
SIO_000300: 3.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.966e0

DP
type: SiteQuality
SIO_000300: 1.836626e6

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.114330287497214e-4
allele num: 8974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.423e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.216e0

MQRankSum
type: SiteQuality
SIO_000300: -1.262e0

DP
type: SiteQuality
SIO_000300: 1.837552e6

VQSLOD
type: SiteQuality
SIO_000300: -4.165e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

QD
type: SiteQuality
SIO_000300: 4.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 3.107e1

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.071e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.83812e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.62e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.669e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 4.226e1

VQSLOD
type: SiteQuality
SIO_000300: -1.474e1

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.89e0

FS
type: SiteQuality
SIO_000300: 1.188e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.838673e6

MQ
type: SiteQuality
SIO_000300: 3.645e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.71e0

QD
type: SiteQuality
SIO_000300: 7.14e0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e0

VQSLOD
type: SiteQuality
SIO_000300: -4.89e0

MQ
type: SiteQuality
SIO_000300: 3.645e1

QD
type: SiteQuality
SIO_000300: 7.14e0

FS
type: SiteQuality
SIO_000300: 1.188e0

DP
type: SiteQuality
SIO_000300: 1.838673e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -5.339e0

DP
type: SiteQuality
SIO_000300: 1.838719e6

MQ
type: SiteQuality
SIO_000300: 2.538e1

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

GenotypeQuality
all individuals: 8813
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39274
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

DP
type: SiteQuality
SIO_000300: 1.839034e6

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 2.794e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.64e0

VQSLOD
type: SiteQuality
SIO_000300: -4.361e0

MQ
type: SiteQuality
SIO_000300: 3.185e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

GenotypeQuality
all individuals: 220
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4025
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 8812
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.507346975570179e-5
allele num: 66558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.101079057476327e-4
allele num: 9082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.823929961089494e-4
allele num: 16448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.393e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 3.335e1

FS
type: SiteQuality
SIO_000300: 1.104e0

DP
type: SiteQuality
SIO_000300: 1.839992e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

QD
type: SiteQuality
SIO_000300: 7.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4023
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 609
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8812
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.014152218983804e-5
allele num: 66562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 3.371e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.682e0

DP
type: SiteQuality
SIO_000300: 1.840283e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.746e0

QD
type: SiteQuality
SIO_000300: 3.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4027
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.201959193485381e-4
allele num: 66558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.943e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.68e-1

DP
type: SiteQuality
SIO_000300: 1.840501e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

QD
type: SiteQuality
SIO_000300: 6.61e0

MQ
type: SiteQuality
SIO_000300: 3.37e1

FS
type: SiteQuality
SIO_000300: 1.197e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2155
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GenotypeQuality
all individuals: 610
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 6.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

FS
type: SiteQuality
SIO_000300: 1.197e0

MQ
type: SiteQuality
SIO_000300: 3.37e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.943e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

DP
type: SiteQuality
SIO_000300: 1.840501e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 1
allele frequency: 1.237930180737806e-4
allele num: 8078
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.657e0

MQ
type: SiteQuality
SIO_000300: 3.365e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 2.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.840279e6

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.823264859608606e-4
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

MQ
type: SiteQuality
SIO_000300: 3.573e1

FS
type: SiteQuality
SIO_000300: 1.746e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.742e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.84018e6

QD
type: SiteQuality
SIO_000300: 9.44e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.077549532028686e-5
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

DP
type: SiteQuality
SIO_000300: 1.847381e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

MQ
type: SiteQuality
SIO_000300: 3.278e1

QD
type: SiteQuality
SIO_000300: 7.27e0

VQSLOD
type: SiteQuality
SIO_000300: -2.773e0

FS
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.79e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 808
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

South Asian
type: Population
allele count: 93
allele frequency: 5.652121064786678e-3
allele num: 16454
num of homozygotes: 1

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.953535899978962e-4
allele num: 66546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.278e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.79e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.773e0

FS
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

QD
type: SiteQuality
SIO_000300: 7.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

DP
type: SiteQuality
SIO_000300: 1.847381e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
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allele frequency: 1.238543472875898e-4
allele num: 8074
num of homozygotes: 0

South Asian
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allele count: 80
allele frequency: 4.862039625622949e-3
allele num: 16454
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.155711838427554e-4
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.098659635245001e-4
allele num: 9102
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
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SIO_000300: -1.993e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.56e0

MQ
type: SiteQuality
SIO_000300: 3.303e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.02e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

East Asian
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allele num: 8076
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African
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allele num: 9094
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South Asian
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allele count: 17
allele frequency: 1.033309020179917e-3
allele num: 16452
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.843e6

FS
type: SiteQuality
SIO_000300: 2.538e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9084
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16456
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

Other
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allele num: 900
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East Asian
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allele count: 1
allele frequency: 1.238236750866766e-4
allele num: 8076
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele num: 11538
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 1.183e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

MQ
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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QD
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DP
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9020
num of homozygotes: 0

Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

East Asian
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South Asian
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Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.761e0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010597302504817e-5
allele num: 66432
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16444
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1

FS
type: SiteQuality
SIO_000300: 3.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.242e0

DP
type: SiteQuality
SIO_000300: 1.841811e6

MQ
type: SiteQuality
SIO_000300: 3.379e1

QD
type: SiteQuality
SIO_000300: 3.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.733e0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020053152935492e-5
allele num: 66224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.829409e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 3.902e1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

GenotypeQuality
all individuals: 7700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.136621959536258e-4
allele num: 8798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.417e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.156e0

MQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

DP
type: SiteQuality
SIO_000300: 1.778626e6

MQ
type: SiteQuality
SIO_000300: 3.352e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 594
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 9.75e1
variant carriers: 12

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.138433515482696e-4
allele num: 8784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.450680063717682e-4
allele num: 65288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.866e0

MQ
type: SiteQuality
SIO_000300: 3.373e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.036e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 2.83e0

DP
type: SiteQuality
SIO_000300: 1.768232e6

GenotypeQuality
all individuals: 34017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.229709788489916e-4
allele num: 16264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.748192623453008e-4
allele num: 65288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.827683615819209e-5
allele num: 11328
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.269357705001269e-4
allele num: 7878
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.768232e6

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 3.373e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.866e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.036e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 2.83e0

GenotypeQuality
all individuals: 23234
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
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variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.092e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

DP
type: SiteQuality
SIO_000300: 1.32577e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.809e1

GenotypeQuality
all individuals: 1147
bin: 2.5e0
variant carriers: 26

GenotypeQuality
all individuals: 4381
bin: 6.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1190
bin: 8.25e1
variant carriers: 17

GenotypeQuality
all individuals: 5831
bin: 2.25e1
variant carriers: 57

GenotypeQuality
all individuals: 543
bin: 4.75e1
variant carriers: 47

GenotypeQuality
all individuals: 3240
bin: 9.75e1
variant carriers: 177

GenotypeQuality
all individuals: 187
bin: 5.75e1
variant carriers: 33

European (Non-Finnish)
type: Population
allele count: 698
allele frequency: 1.307654839072277e-2
allele num: 53378
num of homozygotes: 171

East Asian
type: Population
allele count: 16
allele frequency: 2.158661629789531e-3
allele num: 7412
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 10
allele frequency: 2.081598667776853e-3
allele num: 4804
num of homozygotes: 2

Latino
type: Population
allele count: 58
allele frequency: 5.934110906486597e-3
allele num: 9774
num of homozygotes: 10

South Asian
type: Population
allele count: 36
allele frequency: 2.389486260454002e-3
allele num: 15066
num of homozygotes: 7

African
type: Population
allele count: 30
allele frequency: 3.653190452995616e-3
allele num: 8212
num of homozygotes: 4

Other
type: Population
allele count: 9
allele frequency: 1.232876712328767e-2
allele num: 730
num of homozygotes: 2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

QD
type: SiteQuality
SIO_000300: 4.3e0

FS
type: SiteQuality
SIO_000300: 4.7591e1

MQ
type: SiteQuality
SIO_000300: 3.446e1

VQSLOD
type: SiteQuality
SIO_000300: 3.056e1

MQRankSum
type: SiteQuality
SIO_000300: -2.64e0

DP
type: SiteQuality
SIO_000300: 1.317486e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.675e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 4440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.860672819291456e-5
allele num: 53744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 1.261965e6

VQSLOD
type: SiteQuality
SIO_000300: -4.222e0

FS
type: SiteQuality
SIO_000300: 4.84e0

QD
type: SiteQuality
SIO_000300: 9.390000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.442e0

MQ
type: SiteQuality
SIO_000300: 3.088e1

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3839
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GenotypeQuality
all individuals: 1197
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.767329716696805e-5
allele num: 53088
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14990
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.535e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.699e1

VQSLOD
type: SiteQuality
SIO_000300: -4.679e0

MQRankSum
type: SiteQuality
SIO_000300: -1.525e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.249195e6

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.453e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 5.4089e4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.229e-1

MQ
type: SiteQuality
SIO_000300: 2.428e1

QD
type: SiteQuality
SIO_000300: 7.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 27
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 1.25e1
variant carriers: 28

GenotypeQuality
all individuals: 42
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 21

GenotypeQuality
all individuals: 546
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 61
bin: 7.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.111111111111111e-1
allele num: 18
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 3.210272873194221e-2
allele num: 1246
num of homozygotes: 8

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.545454545454546e-2
allele num: 22
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.649717514124294e-3
allele num: 354
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.78e-2

DP
type: SiteQuality
SIO_000300: 1.03651e5

VQSLOD
type: SiteQuality
SIO_000300: -5.09e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

MQ
type: SiteQuality
SIO_000300: 2.2e1

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

DP
type: SiteQuality
SIO_000300: 1.12961e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.93e-2

QD
type: SiteQuality
SIO_000300: 4.51e0

VQSLOD
type: SiteQuality
SIO_000300: -2.964e0

MQ
type: SiteQuality
SIO_000300: 2.704e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 2.808e0

GenotypeQuality
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1688
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.665e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 2.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.14428e5

QD
type: SiteQuality
SIO_000300: 7.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.83e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.730103806228374e-3
allele num: 578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.279999999999999e-2

MQ
type: SiteQuality
SIO_000300: 2.644e1

MQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.308e0

VQSLOD
type: SiteQuality
SIO_000300: -5.505e0

FS
type: SiteQuality
SIO_000300: 4.645e0

QD
type: SiteQuality
SIO_000300: 9.67e0

DP
type: SiteQuality
SIO_000300: 2.3362e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 40
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.587615283267457e-4
allele num: 1518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.172e0

DP
type: SiteQuality
SIO_000300: 2.90288e5

BaseQRankSum
type: SiteQuality
SIO_000300: -4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.05e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.452e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.09e-1

QD
type: SiteQuality
SIO_000300: 9.51e0

MQ
type: SiteQuality
SIO_000300: 2.294e1

GenotypeQuality
all individuals: 134
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.180661577608143e-4
allele num: 3144
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.64509e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.411e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 7.57e0

QD
type: SiteQuality
SIO_000300: 5.83e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 2.026e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.694e0

GenotypeQuality
all individuals: 409
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 307
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GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.94325689856199e-4
allele num: 10292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1920
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5334
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.052e1

QD
type: SiteQuality
SIO_000300: 6.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

DP
type: SiteQuality
SIO_000300: 4.51853e5

VQSLOD
type: SiteQuality
SIO_000300: -7.413e0

MQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 837
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variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2024
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.198083067092652e-3
allele num: 2504
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.222e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 2.019e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.533e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

DP
type: SiteQuality
SIO_000300: 5.21679e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.02e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 1457
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.573514658343552e-5
allele num: 17942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2792
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.84371e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.449e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.77803852547179e-5
allele num: 20454
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 3326
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.96e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQ
type: SiteQuality
SIO_000300: 2.381e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

FS
type: SiteQuality
SIO_000300: 6.111e0

DP
type: SiteQuality
SIO_000300: 6.21751e5

VQSLOD
type: SiteQuality
SIO_000300: -6.576e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 249
bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 982
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Other
type: Population
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allele num: 328
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.525252525252525e-4
allele num: 3960
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South Asian
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 8.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.37e-2

DP
type: SiteQuality
SIO_000300: 6.42853e5

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 2.165e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 1.382940756602427e-3
allele num: 22416
num of homozygotes: 8

African
type: Population
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allele frequency: 0.0e0
allele num: 3754
num of homozygotes: 0

South Asian
type: Population
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Other
type: Population
allele count: 1
allele frequency: 3.012048192771084e-3
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.686727565824826e-4
allele num: 3722
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 2.28e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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