15-66170330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170330
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170330
    reference: chr 15
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9709G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.430+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+37G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+37G>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27711
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

15-66170334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170334
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170334
    reference: chr 15
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9705C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+41C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.431-35C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8046
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

15-66170343-T-TGTACCACCATCCCAGTCTCTTTAGTAAGGAATGGTCTTACTCCTTGGCCTTATTTTTGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170343
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170403
    reference: chr 15
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: TGTACCACCATCCCAGTCTCTTTAGTAAGGAATGGTCTTACTCCTTGGCCTTATTTTTGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 20248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

15-66170346-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170346
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170346
    reference: chr 15
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+53A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.431-23A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+53A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+53A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+53A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9693A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+53A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+53A>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1525
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-66170356-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170356
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170356
    reference: chr 15
allele count: 3
allele frequency: 2.497835209485113e-5
allele num: 120104
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+63A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9683A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.431-13A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+63A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+63A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+63A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+63A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+63A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27483
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

15-66170360-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170360
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170360
    reference: chr 15
allele count: 5
allele frequency: 4.182420450363034e-5
allele num: 119548
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+67G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9679G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.431-9G>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-66170382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170382
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170382
    reference: chr 15
allele count: 11
allele frequency: 9.901346583135306e-5
allele num: 111096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+89C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+89C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+89C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9657C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+5C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+89C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+89C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+89C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14163
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22098
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
hgvs: c.439+5C>T
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

15-66170387-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170387
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170387
    reference: chr 15
allele count: 1
allele frequency: 9.187460953290949e-6
allele num: 108844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9652A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+94A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+10A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12780
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5078
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1956
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

15-66170391-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170391
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170391
    reference: chr 15
allele count: 1
allele frequency: 9.381215054973921e-6
allele num: 106596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9648A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+98A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+14A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

15-66170407-CAAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170407
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170404
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 97334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+117_220+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+117_430+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9629_125-9627delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+117_73+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+117_430+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+117_430+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+117_430+119delGAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+33_439+35delGAA
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: CAAG
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

15-66170408-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170408
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170406
    reference: chr 15
allele count: 1
allele frequency: 1.029166580902785e-5
allele num: 97166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+117_430+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+117_73+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+117_430+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+117_430+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+117_430+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+33_439+34delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+117_220+118delGA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9629_125-9628delGA
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: AAG
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

15-66170409-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170409
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170409
    reference: chr 15
allele count: 1
allele frequency: 1.034554107179805e-5
allele num: 96660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+116A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+116A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+116A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+32A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+116A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+116A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9630A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+116A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

15-66170410-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170410
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170410
    reference: chr 15
allele count: 8
allele frequency: 8.512087163772556e-5
allele num: 93984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+33G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+117G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9629G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+117G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+117G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+117G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+117G>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+117G>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10529
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-66170421-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170421
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170421
    reference: chr 15
allele count: 1
allele frequency: 1.148448446149252e-5
allele num: 87074
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+128A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+128A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+128A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9618A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+128A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+128A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+44A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+128A>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7723
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3331
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-66170424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170424
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170424
    reference: chr 15
allele count: 3
allele frequency: 3.504672897196262e-5
allele num: 85600
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+47G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+131G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9615G>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18397
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4979
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

15-66170426-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170426
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170426
    reference: chr 15
allele count: 1
allele frequency: 1.192662738830713e-5
allele num: 83846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9613T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+133T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+133T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+133T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+133T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+133T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+49T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+133T>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18145
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11032
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5097
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

15-66170427-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66170427
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66170427
    reference: chr 15
allele count: 1
allele frequency: 1.221448638084768e-5
allele num: 81870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+134T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.430+134T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.220+134T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+50T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-9612T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.430+134T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.430+134T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.73+134T>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11339
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4407
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4912
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-66171959-ATTCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66171959
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66171955
    reference: chr 15
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-47_74-44delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8077_125-8074delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-47_431-44delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1585_439+1588delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-47_221-44delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1669_430+1672delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-101_431-98delCCTT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-47_431-44delCCTT
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: ATTCC
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

15-66171983-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66171983
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66171983
    reference: chr 15
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-26G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1606G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-26G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-26G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-26G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-80G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1690G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8056G>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3637
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

15-66171985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66171985
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66171985
    reference: chr 15
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1692C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-78C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-24C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8054C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1608C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-24C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-24C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-24C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

15-66171988-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66171988
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66171988
    reference: chr 15
allele count: 1
allele frequency: 8.296414289743973e-6
allele num: 120534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1695A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-21A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-21A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-21A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-75A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8051A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-21A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1611A>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

15-66172000-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172000
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66171999
    reference: chr 15
allele count: 3
allele frequency: 2.482991508169042e-5
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-5delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-5delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8035delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-5delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-5delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1627delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-59delC
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1711delC
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31810
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
hgvs: c.431-5delC
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: TC
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

15-66172003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172003
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172003
    reference: chr 15
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8036C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.431-6C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.221-6C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1626C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-60C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.431-6C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.74-6C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1710C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 8.75e1
  variant carriers: 0
hgvs: c.431-6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

15-66172016-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172016
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172016
    reference: chr 15
allele count: 2
allele frequency: 1.651527663088357e-5
allele num: 121100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-47T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.438T>C
  hgvsp: ENST00000569896.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1723T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.438T>C
  hgvsp: ENST00000261890.2:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.81T>C
  hgvsp: ENST00000567671.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.228T>C
  hgvsp: ENST00000564910.1:c.228T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-8023T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1639T>C
  variant of: http://identifiers.org/hgnc/9760
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10825
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
hgvs: c.438T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

15-66172040-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172040
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172040
    reference: chr 15
allele count: 16
allele frequency: 1.319783555496899e-4
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.105G>A
  hgvsp: ENST00000567671.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.252G>A
  hgvsp: ENST00000564910.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1663G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+23G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-23G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.462G>A
  hgvsp: ENST00000261890.2:c.462G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7999G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1747G>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser154Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-66172043-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172043
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172043
    reference: chr 15
allele count: 2
allele frequency: 1.649811096629436e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7996C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-20C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1750C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1666C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.465C>T
  hgvsp: ENST00000261890.2:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+26C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.108C>T
  hgvsp: ENST00000567671.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.255C>T
  hgvsp: ENST00000564910.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31803
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala155Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/15-66172054-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172054
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172054
    reference: chr 15
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+37C>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1761C>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.476C>A
  hgvsp: ENSP00000261890.2:p.Thr159Lys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7985C>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.266C>A
  hgvsp: ENSP00000455567.1:p.Thr89Lys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.119C>A
  hgvsp: ENSP00000454673.1:p.Thr40Lys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-9C>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1677C>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31801
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr159Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-66172061-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172061
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172061
    reference: chr 15
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+44A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7978A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.273A>C
  hgvsp: ENST00000564910.1:c.273A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.431-2A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1768A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.483A>C
  hgvsp: ENST00000261890.2:c.483A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1684A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.126A>C
  hgvsp: ENST00000567671.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10957
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: c.431-2A>C
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

15-66172066-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172066
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172066
    reference: chr 15
allele count: 7
allele frequency: 5.776149453741294e-5
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.488C>G
  hgvsp: ENSP00000261890.2:p.Ala163Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7973C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.278C>G
  hgvsp: ENSP00000455567.1:p.Ala93Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.434C>G
  hgvsp: ENSP00000456638.1:p.Ala145Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+49C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.131C>G
  hgvsp: ENSP00000454673.1:p.Ala44Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1689C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1773C>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala163Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

15-66172083-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172083
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172083
    reference: chr 15
allele count: 3
allele frequency: 2.477373323644051e-5
allele num: 121096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.295T>C
  hgvsp: ENST00000564910.1:c.295T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1790T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.505T>C
  hgvsp: ENST00000261890.2:c.505T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.451T>C
  hgvsp: ENST00000565075.1:c.451T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1706T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.148T>C
  hgvsp: ENST00000567671.1:c.148T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+66T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7956T>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3208
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu169Leu
num of homozygotes: 1
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

15-66172095-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172095
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172095
    reference: chr 15
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+78A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+6A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7944A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1802A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+6A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+6A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1718A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+6A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10420
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.511+6A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-66172099-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172099
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172099
    reference: chr 15
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+10G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1722G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+10G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+10G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1806G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+10G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+82G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7940G>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10199
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/15-66172107-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172107
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172107
    reference: chr 15
allele count: 2
allele frequency: 1.65604040738594e-5
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+18A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7932A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1730A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+90A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+18A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1814A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+18A>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+18A>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3641
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-66172108-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172108
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172108
    reference: chr 15
allele count: 24
allele frequency: 1.987380136135539e-4
allele num: 120762
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+19G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+91G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1731G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1815G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7931G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+19G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+19G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+19G>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

15-66172109-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172109
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172109
    reference: chr 15
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+20A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7930A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+20A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+20A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+92A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1732A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+20A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1816A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD

15-66172112-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172112
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172112
    reference: chr 15
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7927A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+23A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+95A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+23A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+23A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1735A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+23A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1819A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9133
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

15-66172115-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172115
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172115
    reference: chr 15
allele count: 1
allele frequency: 8.289399515899069e-6
allele num: 120636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+26C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+26C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1738C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+98C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+26C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7924C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1822C>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+26C>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-66172117-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172117
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172117
    reference: chr 15
allele count: 1
allele frequency: 8.289674381590291e-6
allele num: 120632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1740A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+28A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+100A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+28A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+28A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1824A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7922A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+28A>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

15-66172124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172124
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172124
    reference: chr 15
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1831C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1747C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+35C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+35C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7915C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+107C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+35C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+35C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

15-66172140-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66172140
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66172140
    reference: chr 15
allele count: 1
allele frequency: 8.340144451301897e-6
allele num: 119902
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.511+51G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.430+1847G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-7899G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.439+123G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.301+51G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.457+51G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.154+51G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.439+1763G>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3631
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD

15-66179991-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66179991
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66179991
    reference: chr 15
allele count: 24
allele frequency: 2.113085280600116e-4
allele num: 113578
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-71A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-48A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-71A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-48A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-48A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-48A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-48A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-48A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13404
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8758
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5907
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11110
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

15-66179994-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66179994
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66179994
    reference: chr 15
allele count: 1
allele frequency: 8.801577242641881e-6
allele num: 113616
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-68A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-45A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-45A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-45A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-68A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-45A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-45A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-45A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

15-66180007-CACTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180007
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180003
    reference: chr 15
allele count: 6
allele frequency: 5.261127284206096e-5
allele num: 114044
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-30_512-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-30_302-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-30_458-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-30_431-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-30_125-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-30_155-27delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-53_440-50delCTAA
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-53_440-50delCTAA
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20347
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4457
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: CACTA
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

15-66180009-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180009
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180009
    reference: chr 15
allele count: 61
allele frequency: 5.339355426010539e-4
allele num: 114246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-53C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-30C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-30C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-30C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-30C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-30C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-53C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-30C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 20899
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7914
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20258
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP

15-66180015-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180015
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180015
    reference: chr 15
allele count: 1
allele frequency: 8.701856976278738e-6
allele num: 114918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-47A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-24A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-24A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-24A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-24A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-47A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-24A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-24A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8200
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9173
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD

15-66180019-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180019
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180019
    reference: chr 15
allele count: 17
allele frequency: 1.473443350436833e-4
allele num: 115376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-20T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-20T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-43T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-20T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-43T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-20T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-20T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-20T>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13177
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8376
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

15-66180025-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180025
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180025
    reference: chr 15
allele count: 2
allele frequency: 1.724792162544413e-5
allele num: 115956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.458-14C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.302-14C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-37C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-37C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.155-14C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.512-14C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.125-14C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.431-14C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23236
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22746
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

15-66180048-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180048
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180048
    reference: chr 15
allele count: 1
allele frequency: 8.334305668994715e-6
allele num: 119986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.164G>A
  hgvsp: ENSP00000454673.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.467G>A
  hgvsp: ENSP00000456638.1:p.Arg156His
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.134G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.521G>A
  hgvsp: ENSP00000261890.2:p.Arg174His
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.440G>A
  hgvsp: ENSP00000454381.1:p.Arg147His
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-14G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-14G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.311G>A
  hgvsp: ENSP00000455567.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25651
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7475
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg174His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

15-66180058-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180058
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180058
    reference: chr 15
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.531T>G
  hgvsp: ENST00000261890.2:c.531T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.477T>G
  hgvsp: ENST00000565075.1:c.477T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.174T>G
  hgvsp: ENST00000567671.1:c.174T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.450T>G
  hgvsp: ENST00000566233.1:c.450T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.321T>G
  hgvsp: ENST00000564910.1:c.321T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.144T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.440-4T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.440-4T>G
  variant of: http://identifiers.org/hgnc/9760
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: c.440-4T>G
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

15-66180068-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180068
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180068
    reference: chr 15
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.446A>G
  hgvsp: ENSP00000405767.2:p.Asn149Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.331A>G
  hgvsp: ENSP00000455567.1:p.Met111Val
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.184A>G
  hgvsp: ENSP00000454673.1:p.Met62Val
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.541A>G
  hgvsp: ENSP00000261890.2:p.Met181Val
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.460A>G
  hgvsp: ENSP00000454381.1:p.Met154Val
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.487A>G
  hgvsp: ENSP00000456638.1:p.Met163Val
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.446A>G
  hgvsp: ENSP00000456420.1:p.Asn149Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.154A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5067
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met181Val
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

15-66180070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180070
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180070
    reference: chr 15
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454381
  ensembl transcript: ENST00000566233
  gene symbol: RAB11A
  hgvsc: ENST00000566233.1:c.462G>A
  hgvsp: ENSP00000454381.1:p.Met154Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.489G>A
  hgvsp: ENSP00000456638.1:p.Met163Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.448G>A
  hgvsp: ENSP00000456420.1:p.Val150Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.156G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.543G>A
  hgvsp: ENSP00000261890.2:p.Met181Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.448G>A
  hgvsp: ENSP00000405767.2:p.Val150Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.333G>A
  hgvsp: ENSP00000455567.1:p.Met111Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.186G>A
  hgvsp: ENSP00000454673.1:p.Met62Ile
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met181Ile
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

15-66180080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180080
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180080
    reference: chr 15
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.553C>T
  hgvsp: ENSP00000261890.2:p.Arg185Cys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.499C>T
  hgvsp: ENSP00000456638.1:p.Arg167Cys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.343C>T
  hgvsp: ENSP00000455567.1:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.458C>T
  hgvsp: ENSP00000456420.1:p.Thr153Met
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.458C>T
  hgvsp: ENSP00000405767.2:p.Thr153Met
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.196C>T
  hgvsp: ENSP00000454673.1:p.Arg66Cys
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.166C>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5087
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg185Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

15-66180082-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180082
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180082
    reference: chr 15
allele count: 4
allele frequency: 3.299458888742246e-5
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.460C>T
  hgvsp: ENSP00000456420.1:p.Arg154Ter
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.501C>T
  hgvsp: ENST00000565075.1:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.168C>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.555C>T
  hgvsp: ENST00000261890.2:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.198C>T
  hgvsp: ENST00000567671.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.345C>T
  hgvsp: ENST00000564910.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000405767
  ensembl transcript: ENST00000435304
  gene symbol: RAB11A
  hgvsc: ENST00000435304.2:c.460C>T
  hgvsp: ENSP00000405767.2:p.Arg154Ter
  variant of: http://identifiers.org/hgnc/9760
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg154Ter
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

15-66180097-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180097
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180097
    reference: chr 15
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.570T>G
  hgvsp: ENST00000261890.2:c.570T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.516T>G
  hgvsp: ENST00000565075.1:c.516T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.213T>G
  hgvsp: ENST00000567671.1:c.213T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*7T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.183T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.360T>G
  hgvsp: ENST00000564910.1:c.360T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5088
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser190Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

15-66180102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180102
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180102
    reference: chr 15
allele count: 2
allele frequency: 1.648967746190884e-5
allele num: 121288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.521G>A
  hgvsp: ENSP00000456638.1:p.Ser174Asn
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.575G>A
  hgvsp: ENSP00000261890.2:p.Ser192Asn
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.365G>A
  hgvsp: ENSP00000455567.1:p.Ser122Asn
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.188G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.218G>A
  hgvsp: ENSP00000454673.1:p.Ser73Asn
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3396
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser192Asn
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-66180108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180108
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180108
    reference: chr 15
allele count: 3
allele frequency: 2.473329266080762e-5
allele num: 121294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.371A>G
  hgvsp: ENSP00000455567.1:p.Asn124Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.224A>G
  hgvsp: ENSP00000454673.1:p.Asn75Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.581A>G
  hgvsp: ENSP00000261890.2:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*18A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.527A>G
  hgvsp: ENSP00000456638.1:p.Asn176Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.194A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn194Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

15-66180112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180112
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180112
    reference: chr 15
allele count: 14
allele frequency: 1.154220324171023e-4
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.531G>A
  hgvsp: ENST00000565075.1:c.531G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.375G>A
  hgvsp: ENST00000564910.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.228G>A
  hgvsp: ENST00000567671.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.198G>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.585G>A
  hgvsp: ENST00000261890.2:c.585G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 25960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26739
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val195Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-66180118-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180118
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180118
    reference: chr 15
allele count: 33
allele frequency: 2.72079678121496e-4
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.204T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.591T>G
  hgvsp: ENST00000261890.2:c.591T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.381T>G
  hgvsp: ENST00000564910.1:c.381T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.537T>G
  hgvsp: ENST00000565075.1:c.537T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.234T>G
  hgvsp: ENST00000567671.1:c.234T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*28T>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9429
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro197Pro
num of homozygotes: 1
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

15-66180123-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180123
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180123
    reference: chr 15
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.596A>G
  hgvsp: ENSP00000261890.2:p.His199Arg
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.209A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*33A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000454673
  ensembl transcript: ENST00000567671
  gene symbol: RAB11A
  hgvsc: ENST00000567671.1:c.239A>G
  hgvsp: ENSP00000454673.1:p.His80Arg
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.542A>G
  hgvsp: ENSP00000456638.1:p.His181Arg
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.386A>G
  hgvsp: ENSP00000455567.1:p.His129Arg
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14584
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9425
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His199Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

15-66180144-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180144
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180144
    reference: chr 15
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.617A>G
  hgvsp: ENSP00000261890.2:p.Asn206Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*54A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.407A>G
  hgvsp: ENSP00000455567.1:p.Asn136Ser
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.230A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.563A>G
  hgvsp: ENSP00000456638.1:p.Asn188Ser
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9426
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5075
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn206Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

15-66180156-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180156
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180156
    reference: chr 15
allele count: 1
allele frequency: 8.269520202437855e-6
allele num: 120926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.419T>G
  hgvsp: ENSP00000455567.1:p.Val140Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.242T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*66T>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.629T>G
  hgvsp: ENSP00000261890.2:p.Val210Gly
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.575T>G
  hgvsp: ENSP00000456638.1:p.Val192Gly
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val210Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

15-66180171-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180171
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180171
    reference: chr 15
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.590A>T
  hgvsp: ENSP00000456638.1:p.Asn197Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.644A>T
  hgvsp: ENSP00000261890.2:p.Asn215Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.434A>T
  hgvsp: ENSP00000455567.1:p.Asn145Ile
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.257A>T
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*81A>T
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9427
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn215Ile
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

15-66180177-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180177
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180177
    reference: chr 15
allele count: 2
allele frequency: 1.666000266560043e-5
allele num: 120048
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.440A>G
  hgvsp: ENST00000564910.1:c.440A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.263A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.650A>G
  hgvsp: ENST00000261890.2:c.650A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.596A>G
  hgvsp: ENST00000565075.1:c.596A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*87A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24508
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ter217Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

15-66180178-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180178
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180178
    reference: chr 15
allele count: 1
allele frequency: 8.33152816889674e-6
allele num: 120026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.264A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.441A>G
  hgvsp: ENST00000564910.1:c.441A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.597A>G
  hgvsp: ENST00000565075.1:c.597A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.651A>G
  hgvsp: ENST00000261890.2:c.651A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*88A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3352
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7435
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ter217Ter
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

15-66180179-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180179
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180179
    reference: chr 15
allele count: 3
allele frequency: 2.500166677778519e-5
allele num: 119992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*1G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.265G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*1G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.*1G>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*89G>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

15-66180196-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180196
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180195
    reference: chr 15
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*19delT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.283delT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456638
  ensembl transcript: ENST00000565075
  gene symbol: RAB11A
  hgvsc: ENST00000565075.1:c.*19delT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*107delT
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*19delT
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CT
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

15-66180198-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180198
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180198
    reference: chr 15
allele count: 1
allele frequency: 8.388558006878617e-6
allele num: 119210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*108A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*20A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.284A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*20A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

15-66180201-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180201
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180201
    reference: chr 15
allele count: 103
allele frequency: 8.644855891091602e-4
allele num: 119146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*111A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.287A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*23A>G
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*23A>G
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13593
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 9.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 8991
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-66180205-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180205
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180205
    reference: chr 15
allele count: 4
allele frequency: 3.360610286828088e-5
allele num: 119026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*27T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*27T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.291T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*115T>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9491
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5014
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

15-66180207-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180207
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180207
    reference: chr 15
allele count: 1
allele frequency: 8.406752303450132e-6
allele num: 118952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.293T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*117T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*29T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*29T>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9488
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

15-66180211-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180211
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180211
    reference: chr 15
allele count: 7
allele frequency: 5.890768324497181e-5
allele num: 118830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*121T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*33T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.297T>C
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*33T>C
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7212
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4020
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-66180214-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66180214
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 66180214
    reference: chr 15
allele count: 1
allele frequency: 8.425593583067927e-6
allele num: 118686
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000261890
  ensembl transcript: ENST00000261890
  gene symbol: RAB11A
  hgvsc: ENST00000261890.2:c.*36T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000455567
  ensembl transcript: ENST00000564910
  gene symbol: RAB11A
  hgvsc: ENST00000564910.1:c.*36T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103769
  ensembl transcript: ENST00000569304
  gene symbol: RAB11A
  hgvsc: ENST00000569304.1:n.300T>A
  variant of: http://identifiers.org/hgnc/9760
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103769
  ensembl protein: ENSP00000456420
  ensembl transcript: ENST00000569896
  gene symbol: RAB11A
  hgvsc: ENST00000569896.1:c.*124T>A
  variant of: http://identifiers.org/hgnc/9760
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 8044
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.047e0

QD
type: SiteQuality
SIO_000300: 1.3e1

FS
type: SiteQuality
SIO_000300: 2.332e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
SIO_000300: -1.76e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.629387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47620
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.585e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

DP
type: SiteQuality
SIO_000300: 1.629192e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -1.268e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 4.858e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.49e0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47493
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.396e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.435e0

VQSLOD
type: SiteQuality
SIO_000300: -3.284e0

DP
type: SiteQuality
SIO_000300: 1.627471e6

MQRankSum
type: SiteQuality
SIO_000300: -6.35e0

QD
type: SiteQuality
SIO_000300: 1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.581e1

GenotypeQuality
all individuals: 8000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 562
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GenotypeQuality
all individuals: 901
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504528631179851e-5
allele num: 66466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.622e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.733e0

MQ
type: SiteQuality
SIO_000300: 5.559e1

QD
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 1.1432e1

DP
type: SiteQuality
SIO_000300: 1.624153e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.309e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 114
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GenotypeQuality
all individuals: 220
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516116316443798e-5
allele num: 65958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.767532721234616e-5
allele num: 10238
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0293e1

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

QD
type: SiteQuality
SIO_000300: 1.491e1

VQSLOD
type: SiteQuality
SIO_000300: -9.785e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.141e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 1.610026e6

GenotypeQuality
all individuals: 894
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 220
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 1352
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.369865408145429e-4
allele num: 11442
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.599437e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 4.297e0

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.58e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

GenotypeQuality
all individuals: 378
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 386
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variant carriers: 0

GenotypeQuality
all individuals: 891
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variant carriers: 11

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 982
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 1052
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variant carriers: 0

GenotypeQuality
all individuals: 206
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GenotypeQuality
all individuals: 11438
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.4519535374868e-3
allele num: 7576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

DP
type: SiteQuality
SIO_000300: 1.399074e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.186e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 978
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 877
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.103022281050077e-4
allele num: 9066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.328201e6

QD
type: SiteQuality
SIO_000300: 1.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.723424789742176e-5
allele num: 58024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.165e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.097e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.254971e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 192
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GenotypeQuality
all individuals: 296
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GenotypeQuality
all individuals: 870
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 9.91237e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.382e1

QD
type: SiteQuality
SIO_000300: 2.345e1

VQSLOD
type: SiteQuality
SIO_000300: 4.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 190
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 193
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 351
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GenotypeQuality
all individuals: 738
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.913802342494067e-5
allele num: 52252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14656
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

QD
type: SiteQuality
SIO_000300: 1.678e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 9.81385e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14620
num of homozygotes: 0

European (Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.276487107480215e-4
allele num: 7834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
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QD
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VQSLOD
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.72837e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50294
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8766
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.550159567087554e-4
allele num: 14414
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.216e0

VQSLOD
type: SiteQuality
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MQ
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 1.0025e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5772
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46266
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.442169022209403e-4
allele num: 6934
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

DP
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SIO_000300: 9.02641e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.761e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.604438182458612e-5
allele num: 45424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.845e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.25e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
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SIO_000300: -6.889999999999999e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.99356e5

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.251745102454402e-5
allele num: 44410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ClippingRankSum
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.83e0

DP
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SIO_000300: 8.97551e5

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.323861139592794e-5
allele num: 13654
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43258
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5104
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Latino
type: Population
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allele num: 7190
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.763718023823472e-5
allele num: 10242
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66422
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South Asian
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East Asian
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African
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Latino
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European (Finnish)
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allele num: 6612
num of homozygotes: 0

Other
type: Population
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MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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allele num: 66436
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Other
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allele num: 900
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European (Finnish)
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QD
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 1.512401693889897e-4
allele num: 6612
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Latino
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Other
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African
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East Asian
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele num: 11560
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.502855425308085e-5
allele num: 66540
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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East Asian
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Other
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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Latino
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South Asian
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Other
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 2.100903388457037e-4
allele num: 66638
num of homozygotes: 0

African
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
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East Asian
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Other
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allele num: 906
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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Other
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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QD
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InbreedingCoeff
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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African
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East Asian
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Other
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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DP
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Other
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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European (Finnish)
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DP
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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African
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QD
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.503216884132043e-5
allele num: 66524
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MQRankSum
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ReadPosRankSum
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FS
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QD
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VQSLOD
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MQ
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66508
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South Asian
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allele num: 16354
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Latino
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10314
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66458
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South Asian
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ClippingRankSum
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VQSLOD
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FS
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QD
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MQ
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.596952908587258e-4
allele num: 11552
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 21
allele frequency: 3.160175765966412e-4
allele num: 66452
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66452
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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East Asian
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ClippingRankSum
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MQ
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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African
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Other
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European (Non-Finnish)
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East Asian
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Latino
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66406
num of homozygotes: 0

East Asian
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South Asian
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Other
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African
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Latino
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European (Finnish)
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MQRankSum
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MQ
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.188118811881188e-5
allele num: 16160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.104e0

QD
type: SiteQuality
SIO_000300: 1.551e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

DP
type: SiteQuality
SIO_000300: 2.755556e6

FS
type: SiteQuality
SIO_000300: 2.03e0

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.94e-1

GenotypeQuality
all individuals: 1467
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1000
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51290508033526e-5
allele num: 66098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.723e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

DP
type: SiteQuality
SIO_000300: 2.725848e6

QD
type: SiteQuality
SIO_000300: 1.275e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

GenotypeQuality
all individuals: 1860
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9047
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 2079
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4125
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.238589553468446e-5
allele num: 12138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.591841834025674e-4
allele num: 64034
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 1.591532e6

QD
type: SiteQuality
SIO_000300: 1.528e1

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

VQSLOD
type: SiteQuality
SIO_000300: -2.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 9.91e0

DP
type: SiteQuality
SIO_000300: 1.602265e6

GenotypeQuality
all individuals: 273
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9109
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.866969500324465e-4
allele num: 12328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.543e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

QD
type: SiteQuality
SIO_000300: 1.172e1

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 1.659692e6

GenotypeQuality
all individuals: 4533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9168
bin: 9.75e1
variant carriers: 61

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 8.25e1
variant carriers: 1

African
type: Population
allele count: 59
allele frequency: 5.757220921155348e-3
allele num: 10248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554774713144065e-5
allele num: 64318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.802816901408451e-5
allele num: 11360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12412
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.231e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.15e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 1.716e0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

DP
type: SiteQuality
SIO_000300: 1.668695e6

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6984
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variant carriers: 0

GenotypeQuality
all individuals: 1639
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variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 0

GenotypeQuality
all individuals: 259
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variant carriers: 0

GenotypeQuality
all individuals: 3178
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variant carriers: 0

GenotypeQuality
all individuals: 3133
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variant carriers: 0

GenotypeQuality
all individuals: 288
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variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21676
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.778089887640449e-5
allele num: 11392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 1.691748e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 6.043e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

QD
type: SiteQuality
SIO_000300: 8.68e0

GenotypeQuality
all individuals: 218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9210
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 4758
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variant carriers: 0

GenotypeQuality
all individuals: 3023
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variant carriers: 0

GenotypeQuality
all individuals: 3182
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 2329
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variant carriers: 0

GenotypeQuality
all individuals: 998
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variant carriers: 0

GenotypeQuality
all individuals: 547
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variant carriers: 0

GenotypeQuality
all individuals: 3783
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variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7069
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.623051998148434e-4
allele num: 64810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12914
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.71e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 1.704054e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

FS
type: SiteQuality
SIO_000300: 3.514e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

GenotypeQuality
all individuals: 239
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
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GenotypeQuality
all individuals: 3856
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GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9242
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4833
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.749475157452764e-4
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.03e0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.179e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.037e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.722076e6

GenotypeQuality
all individuals: 1797
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 9351
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variant carriers: 1

GenotypeQuality
all individuals: 2470
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4017
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

Other
type: Population
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South Asian
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African
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allele frequency: 9.624639076034648e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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East Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66514
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East Asian
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South Asian
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MQ
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InbreedingCoeff
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QD
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.677542519958348e-5
allele num: 11524
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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MQ
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.501456412720339e-5
allele num: 66602
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Other
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South Asian
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DP
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.28e-2

ReadPosRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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Other
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MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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East Asian
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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MQ
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ReadPosRankSum
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DP
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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MQ
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VQSLOD
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MQRankSum
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QD
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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DP
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VQSLOD
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MQ
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QD
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FS
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MQRankSum
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ReadPosRankSum
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SIO_000300: 6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.034e0

GenotypeQuality
all individuals: 7617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.659508139937652e-4
allele num: 11548
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.85028502850285e-4
allele num: 66660
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.798084e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

FS
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
type: SiteQuality
SIO_000300: 1.421e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.64e0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4037
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.204e0

FS
type: SiteQuality
SIO_000300: 8.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.101e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.797159e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.169e1

GenotypeQuality
all individuals: 26552
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 9.19e0

VQSLOD
type: SiteQuality
SIO_000300: -1.217e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.38e-1

FS
type: SiteQuality
SIO_000300: 7.85e-1

DP
type: SiteQuality
SIO_000300: 1.795596e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 7548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

DP
type: SiteQuality
SIO_000300: 1.790641e6

QD
type: SiteQuality
SIO_000300: 1.088e1

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

FS
type: SiteQuality
SIO_000300: 3.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7481
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 3.667e0

MQRankSum
type: SiteQuality
SIO_000300: -1.131e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

DP
type: SiteQuality
SIO_000300: 1.777428e6

QD
type: SiteQuality
SIO_000300: 9.93e0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9427
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 7435
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 1.771215e6

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.761e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeQuality
all individuals: 1534
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.048e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.79e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 1.929e0

DP
type: SiteQuality
SIO_000300: 1.770185e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.31e-1

QD
type: SiteQuality
SIO_000300: 1.195e1

GenotypeQuality
all individuals: 9428
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5051
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3350
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.521613311629589e-5
allele num: 66348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.484e0

VQSLOD
type: SiteQuality
SIO_000300: 8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.18e1

DP
type: SiteQuality
SIO_000300: 1.76946e6

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
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GenotypeQuality
all individuals: 9427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4028
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15010
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.749301e6

GenotypeQuality
all individuals: 9427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512218727316719e-5
allele num: 66128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.747076e6

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.363e0

QD
type: SiteQuality
SIO_000300: 1.406e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9513
bin: 9.75e1
variant carriers: 103

GenotypeQuality
all individuals: 3318
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512584704743466e-5
allele num: 66112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.468007629616785e-4
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 98
allele frequency: 9.439414371026777e-3
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.283e1

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 2.244e0

DP
type: SiteQuality
SIO_000300: 1.750917e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 2483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7250
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.631773969430292e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66076
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.744571e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.538e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

MQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

FS
type: SiteQuality
SIO_000300: 1.901e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.742988e6

QD
type: SiteQuality
SIO_000300: 1.587e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9490
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 21904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 6.74893945237177e-4
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e0

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.740477e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1