3-4718351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718351
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718351
    reference: chr 3
allele count: 1
allele frequency: 8.384197464618687e-6
allele num: 119272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2833G>A
  hgvsp: ENSP00000346595.6:p.Val945Met
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2806G>A
  hgvsp: ENSP00000349597.4:p.Val936Met
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2788G>A
  hgvsp: ENSP00000306253.8:p.Val930Met
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22781G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2806G>A
  hgvsp: ENSP00000405934.2:p.Val936Met
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2788G>A
  hgvsp: ENSP00000401671.2:p.Val930Met
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2761G>A
  hgvsp: ENSP00000397885.2:p.Val921Met
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val930Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

3-4718357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718357
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718357
    reference: chr 3
allele count: 1
allele frequency: 8.385884878572387e-6
allele num: 119248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2839C>T
  hgvsp: ENSP00000346595.6:p.Arg947Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2812C>T
  hgvsp: ENSP00000405934.2:p.Arg938Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2767C>T
  hgvsp: ENSP00000397885.2:p.Arg923Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2812C>T
  hgvsp: ENSP00000349597.4:p.Arg938Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2794C>T
  hgvsp: ENSP00000306253.8:p.Arg932Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2794C>T
  hgvsp: ENSP00000401671.2:p.Arg932Trp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22787C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg932Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-4718358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718358
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718358
    reference: chr 3
allele count: 1
allele frequency: 8.385181706887589e-6
allele num: 119258
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2795G>A
  hgvsp: ENSP00000306253.8:p.Arg932Gln
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2813G>A
  hgvsp: ENSP00000349597.4:p.Arg938Gln
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2768G>A
  hgvsp: ENSP00000397885.2:p.Arg923Gln
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2813G>A
  hgvsp: ENSP00000405934.2:p.Arg938Gln
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22788G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2840G>A
  hgvsp: ENSP00000346595.6:p.Arg947Gln
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2795G>A
  hgvsp: ENSP00000401671.2:p.Arg932Gln
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg932Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-4718372-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718372
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718372
    reference: chr 3
allele count: 2
allele frequency: 1.678162076893386e-5
allele num: 119178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22802T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2809T>C
  hgvsp: ENST00000302640.8:c.2809T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2782T>C
  hgvsp: ENST00000456211.2:c.2782T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2809T>C
  hgvsp: ENST00000443694.2:c.2809T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2854T>C
  hgvsp: ENST00000354582.6:c.2854T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2827T>C
  hgvsp: ENST00000357086.4:c.2827T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2827T>C
  hgvsp: ENST00000423119.2:c.2827T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47180
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu937Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-4718377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718377
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718377
    reference: chr 3
allele count: 4
allele frequency: 3.359368438733518e-5
allele num: 119070
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2814C>T
  hgvsp: ENST00000302640.8:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2832C>T
  hgvsp: ENST00000357086.4:c.2832C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2787C>T
  hgvsp: ENST00000456211.2:c.2787C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2859C>T
  hgvsp: ENST00000354582.6:c.2859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22807C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2832C>T
  hgvsp: ENST00000423119.2:c.2832C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2814C>T
  hgvsp: ENST00000443694.2:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45853
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro938Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

3-4718378-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718378
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718378
    reference: chr 3
allele count: 1
allele frequency: 8.394754957102802e-6
allele num: 119122
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2815A>G
  hgvsp: ENSP00000306253.8:p.Met939Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2833A>G
  hgvsp: ENSP00000405934.2:p.Met945Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2815A>G
  hgvsp: ENSP00000401671.2:p.Met939Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2860A>G
  hgvsp: ENSP00000346595.6:p.Met954Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2788A>G
  hgvsp: ENSP00000397885.2:p.Met930Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2833A>G
  hgvsp: ENSP00000349597.4:p.Met945Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22808A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4066
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met939Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

3-4718380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718380
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718380
    reference: chr 3
allele count: 71
allele frequency: 5.961477102890057e-4
allele num: 119098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2790G>A
  hgvsp: ENSP00000397885.2:p.Met930Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2835G>A
  hgvsp: ENSP00000349597.4:p.Met945Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2817G>A
  hgvsp: ENSP00000306253.8:p.Met939Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2817G>A
  hgvsp: ENSP00000401671.2:p.Met939Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2835G>A
  hgvsp: ENSP00000405934.2:p.Met945Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2862G>A
  hgvsp: ENSP00000346595.6:p.Met954Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22810G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14904
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36723
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 46561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met939Ile
num of homozygotes: 2
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-4718394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718394
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718394
    reference: chr 3
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2831C>T
  hgvsp: ENSP00000306253.8:p.Ala944Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2849C>T
  hgvsp: ENSP00000349597.4:p.Ala950Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2876C>T
  hgvsp: ENSP00000346595.6:p.Ala959Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2804C>T
  hgvsp: ENSP00000397885.2:p.Ala935Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2849C>T
  hgvsp: ENSP00000405934.2:p.Ala950Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2831C>T
  hgvsp: ENSP00000401671.2:p.Ala944Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22824C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala944Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

3-4718397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718397
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718397
    reference: chr 3
allele count: 3
allele frequency: 2.522958926228681e-5
allele num: 118908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2834C>T
  hgvsp: ENSP00000401671.2:p.Ala945Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2807C>T
  hgvsp: ENSP00000397885.2:p.Ala936Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2852C>T
  hgvsp: ENSP00000349597.4:p.Ala951Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2879C>T
  hgvsp: ENSP00000346595.6:p.Ala960Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2852C>T
  hgvsp: ENSP00000405934.2:p.Ala951Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2834C>T
  hgvsp: ENSP00000306253.8:p.Ala945Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22827C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4019
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46459
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala945Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

3-4718398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718398
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718398
    reference: chr 3
allele count: 4
allele frequency: 3.362474781439139e-5
allele num: 118960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22828C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2853C>T
  hgvsp: ENST00000423119.2:c.2853C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2853C>T
  hgvsp: ENST00000357086.4:c.2853C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2880C>T
  hgvsp: ENST00000354582.6:c.2880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2808C>T
  hgvsp: ENST00000456211.2:c.2808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2835C>T
  hgvsp: ENST00000443694.2:c.2835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2835C>T
  hgvsp: ENST00000302640.8:c.2835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala945Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-4718406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718406
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718406
    reference: chr 3
allele count: 1
allele frequency: 8.41779184484326e-6
allele num: 118796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2861G>A
  hgvsp: ENSP00000349597.4:p.Gly954Asp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2861G>A
  hgvsp: ENSP00000405934.2:p.Gly954Asp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2843G>A
  hgvsp: ENSP00000306253.8:p.Gly948Asp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22836G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2888G>A
  hgvsp: ENSP00000346595.6:p.Gly963Asp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2816G>A
  hgvsp: ENSP00000397885.2:p.Gly939Asp
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2843G>A
  hgvsp: ENSP00000401671.2:p.Gly948Asp
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly948Asp
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-4718409-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718409
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718409
    reference: chr 3
allele count: 4
allele frequency: 3.3664366268305e-5
allele num: 118820
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2846A>G
  hgvsp: ENSP00000306253.8:p.Asn949Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2846A>G
  hgvsp: ENSP00000401671.2:p.Asn949Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2864A>G
  hgvsp: ENSP00000405934.2:p.Asn955Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2891A>G
  hgvsp: ENSP00000346595.6:p.Asn964Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2864A>G
  hgvsp: ENSP00000349597.4:p.Asn955Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2819A>G
  hgvsp: ENSP00000397885.2:p.Asn940Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22839A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36524
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn949Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

3-4718421-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718421
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718421
    reference: chr 3
allele count: 2
allele frequency: 1.687365010799136e-5
allele num: 118528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2858C>T
  hgvsp: ENSP00000401671.2:p.Ala953Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2858C>T
  hgvsp: ENSP00000306253.8:p.Ala953Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2903C>T
  hgvsp: ENSP00000346595.6:p.Ala968Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2831C>T
  hgvsp: ENSP00000397885.2:p.Ala944Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22851C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2876C>T
  hgvsp: ENSP00000349597.4:p.Ala959Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2876C>T
  hgvsp: ENSP00000405934.2:p.Ala959Val
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15628
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala953Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-4718426-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718426
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718426
    reference: chr 3
allele count: 1
allele frequency: 8.449799739746167e-6
allele num: 118346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2881C>A
  hgvsp: ENSP00000349597.4:p.Pro961Thr
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2863C>A
  hgvsp: ENSP00000401671.2:p.Pro955Thr
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22856C>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2908C>A
  hgvsp: ENSP00000346595.6:p.Pro970Thr
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2863C>A
  hgvsp: ENSP00000306253.8:p.Pro955Thr
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2881C>A
  hgvsp: ENSP00000405934.2:p.Pro961Thr
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2836C>A
  hgvsp: ENSP00000397885.2:p.Pro946Thr
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15675
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro955Thr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-4718440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718440
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718440
    reference: chr 3
allele count: 1
allele frequency: 8.520790729379687e-6
allele num: 117360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2895C>T
  hgvsp: ENST00000357086.4:c.2895C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2922C>T
  hgvsp: ENST00000354582.6:c.2922C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2850C>T
  hgvsp: ENST00000456211.2:c.2850C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2877C>T
  hgvsp: ENST00000443694.2:c.2877C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2877C>T
  hgvsp: ENST00000302640.8:c.2877C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22870C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2895C>T
  hgvsp: ENST00000423119.2:c.2895C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15526
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp959Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-4718441-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718441
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718441
    reference: chr 3
allele count: 1
allele frequency: 8.520355128401752e-6
allele num: 117366
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2878A>G
  hgvsp: ENSP00000306253.8:p.Ile960Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2851A>G
  hgvsp: ENSP00000397885.2:p.Ile951Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2878A>G
  hgvsp: ENSP00000401671.2:p.Ile960Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22871A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2923A>G
  hgvsp: ENSP00000346595.6:p.Ile975Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2896A>G
  hgvsp: ENSP00000405934.2:p.Ile966Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2896A>G
  hgvsp: ENSP00000349597.4:p.Ile966Val
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile960Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

3-4718444-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718444
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718444
    reference: chr 3
allele count: 1
allele frequency: 8.538397172082857e-6
allele num: 117118
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2881A>G
  hgvsp: ENSP00000306253.8:p.Met961Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2881A>G
  hgvsp: ENSP00000401671.2:p.Met961Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2899A>G
  hgvsp: ENSP00000349597.4:p.Met967Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2854A>G
  hgvsp: ENSP00000397885.2:p.Met952Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2899A>G
  hgvsp: ENSP00000405934.2:p.Met967Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2926A>G
  hgvsp: ENSP00000346595.6:p.Met976Val
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22874A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met961Val
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

3-4718447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718447
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718447
    reference: chr 3
allele count: 2
allele frequency: 1.711156741957563e-5
allele num: 116880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2857G>A
  hgvsp: ENSP00000397885.2:p.Val953Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2902G>A
  hgvsp: ENSP00000349597.4:p.Val968Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2884G>A
  hgvsp: ENSP00000401671.2:p.Val962Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22877G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2884G>A
  hgvsp: ENSP00000306253.8:p.Val962Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2929G>A
  hgvsp: ENSP00000346595.6:p.Val977Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2902G>A
  hgvsp: ENSP00000405934.2:p.Val968Ile
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46665
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val962Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

3-4718464-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718464
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718464
    reference: chr 3
allele count: 1
allele frequency: 8.864776696275021e-6
allele num: 112806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2919G>A
  hgvsp: ENST00000423119.2:c.2919G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2901G>A
  hgvsp: ENST00000302640.8:c.2901G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2874G>A
  hgvsp: ENST00000456211.2:c.2874G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2946G>A
  hgvsp: ENST00000354582.6:c.2946G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2901G>A
  hgvsp: ENST00000443694.2:c.2901G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2919G>A
  hgvsp: ENST00000357086.4:c.2919G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22894G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14310
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu967Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

3-4718492-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718492
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718492
    reference: chr 3
allele count: 1
allele frequency: 9.896091044037606e-6
allele num: 101050
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22922A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+7A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+7A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+7A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+7A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+7A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+7A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17563
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3266
  bin: 3.25e1
  variant carriers: 0
hgvs: c.2922+7A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

3-4718500-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718500
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718500
    reference: chr 3
allele count: 2
allele frequency: 2.064281733170943e-5
allele num: 96886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+15G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+15G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22930G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+15G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+15G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+15G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+15G>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-4718500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718500
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718500
    reference: chr 3
allele count: 1
allele frequency: 1.032140866585472e-5
allele num: 96886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+15G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+15G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+15G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22930G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+15G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+15G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+15G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

3-4718501-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718501
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718501
    reference: chr 3
allele count: 2
allele frequency: 2.082509006851455e-5
allele num: 96038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22931A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+16A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+16A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+16A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+16A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+16A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+16A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4666
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25910
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

3-4718504-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718504
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718503
    reference: chr 3
allele count: 1
allele frequency: 1.053208071786662e-5
allele num: 94948
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+23delG
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22938delG
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4845
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12596
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4947
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: TG
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

3-4718513-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718513
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718513
    reference: chr 3
allele count: 2
allele frequency: 2.238839385662473e-5
allele num: 89332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+28G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22943G>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26495
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

3-4718522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718522
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718522
    reference: chr 3
allele count: 2
allele frequency: 2.478929102627665e-5
allele num: 80680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+37T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22952T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+37T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+37T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+37T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+37T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+37T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5764
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

3-4718523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718523
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718523
    reference: chr 3
allele count: 1
allele frequency: 1.275900785954884e-5
allele num: 78376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+38C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+38C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22953C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+38C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+38C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+38C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+38C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4741
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3857
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5730
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

3-4718531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718531
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718531
    reference: chr 3
allele count: 2
allele frequency: 2.785980943890344e-5
allele num: 71788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+46C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+46C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22961C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+46C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+46C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+46C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+46C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20987
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19893
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5077
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4004
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7000
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

3-4718532-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718532
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718532
    reference: chr 3
allele count: 1082
allele frequency: 1.534838856105311e-2
allele num: 70496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22962G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+47G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+47G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+47G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+47G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+47G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+47G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 2.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 20201
  bin: 7.5e0
  variant carriers: 505
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 1.75e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20814
  bin: 1.25e1
  variant carriers: 712
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4009
  bin: 1.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 5.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 17380
  bin: 2.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 4.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 9.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 3.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.25e1
  variant carriers: 63
num of homozygotes: 86
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

3-4718535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4718535
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4718535
    reference: chr 3
allele count: 2
allele frequency: 2.913498237333567e-5
allele num: 68646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2967+50A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2940+50A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2922+50A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2922+50A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2895+50A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+22965A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2940+50A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20473
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9074
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5445
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

3-4722188-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722188
    reference: chr 3
allele count: 1
allele frequency: 8.337919188887221e-6
allele num: 119934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-49T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-49T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-49T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26618T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-49T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-49T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-49T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8096
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

3-4722192-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722192
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722192
    reference: chr 3
allele count: 1
allele frequency: 8.337919188887221e-6
allele num: 119934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-45A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26622A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29366
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-4722199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722199
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722199
    reference: chr 3
allele count: 160
allele frequency: 1.333600053344002e-3
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-38T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26629T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 29485
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13206
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10939
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-4722211-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722211
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722211
    reference: chr 3
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-26G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26641G>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

3-4722215-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722215
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722215
    reference: chr 3
allele count: 1
allele frequency: 8.318775476249896e-6
allele num: 120210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26645C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-22C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-22C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-22C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-22C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-22C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-22C>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-4722223-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722223
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722223
    reference: chr 3
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2923-14A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2941-14A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2968-14A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26653A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2896-14A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2941-14A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2923-14A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

3-4722242-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722242
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722242
    reference: chr 3
allele count: 2
allele frequency: 1.658017342861406e-5
allele num: 120626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2946T>A
  hgvsp: ENST00000423119.2:c.2946T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2928T>A
  hgvsp: ENST00000443694.2:c.2928T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2928T>A
  hgvsp: ENST00000302640.8:c.2928T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2973T>A
  hgvsp: ENST00000354582.6:c.2973T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2901T>A
  hgvsp: ENST00000456211.2:c.2901T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2946T>A
  hgvsp: ENST00000357086.4:c.2946T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26672T>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile976Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD

3-4722247-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722247
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722247
    reference: chr 3
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2933A>G
  hgvsp: ENSP00000306253.8:p.Asn978Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2933A>G
  hgvsp: ENSP00000401671.2:p.Asn978Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26677A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2951A>G
  hgvsp: ENSP00000349597.4:p.Asn984Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2906A>G
  hgvsp: ENSP00000397885.2:p.Asn969Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2951A>G
  hgvsp: ENSP00000405934.2:p.Asn984Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2978A>G
  hgvsp: ENSP00000346595.6:p.Asn993Ser
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1875
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn978Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

3-4722254-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722254
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722254
    reference: chr 3
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2913G>T
  hgvsp: ENSP00000397885.2:p.Arg971Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26684G>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2940G>T
  hgvsp: ENSP00000401671.2:p.Arg980Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2958G>T
  hgvsp: ENSP00000349597.4:p.Arg986Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2985G>T
  hgvsp: ENSP00000346595.6:p.Arg995Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2940G>T
  hgvsp: ENSP00000306253.8:p.Arg980Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2958G>T
  hgvsp: ENSP00000405934.2:p.Arg986Ser
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg980Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-4722257-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722257
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722257
    reference: chr 3
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2961G>A
  hgvsp: ENST00000423119.2:c.2961G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2961G>A
  hgvsp: ENST00000357086.4:c.2961G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2916G>A
  hgvsp: ENST00000456211.2:c.2916G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2943G>A
  hgvsp: ENST00000302640.8:c.2943G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26687G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.2988G>A
  hgvsp: ENST00000354582.6:c.2988G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2943G>A
  hgvsp: ENST00000443694.2:c.2943G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu981Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

3-4722278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722278
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722278
    reference: chr 3
allele count: 5
allele frequency: 4.142982616044943e-5
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26708C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2937C>T
  hgvsp: ENST00000456211.2:c.2937C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.2982C>T
  hgvsp: ENST00000357086.4:c.2982C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2964C>T
  hgvsp: ENST00000302640.8:c.2964C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2964C>T
  hgvsp: ENST00000443694.2:c.2964C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.2982C>T
  hgvsp: ENST00000423119.2:c.2982C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3009C>T
  hgvsp: ENST00000354582.6:c.3009C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu988Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

3-4722313-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722313
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722313
    reference: chr 3
allele count: 1
allele frequency: 8.340144451301897e-6
allele num: 119902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3017A>T
  hgvsp: ENSP00000349597.4:p.Asn1006Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26743A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3017A>T
  hgvsp: ENSP00000405934.2:p.Asn1006Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2972A>T
  hgvsp: ENSP00000397885.2:p.Asn991Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.2999A>T
  hgvsp: ENSP00000306253.8:p.Asn1000Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.2999A>T
  hgvsp: ENSP00000401671.2:p.Asn1000Ile
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3044A>T
  hgvsp: ENSP00000346595.6:p.Asn1015Ile
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn1000Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-4722315-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722315
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722315
    reference: chr 3
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26745T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2974T>C
  hgvsp: ENSP00000397885.2:p.Ser992Pro
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3001T>C
  hgvsp: ENSP00000401671.2:p.Ser1001Pro
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3001T>C
  hgvsp: ENSP00000306253.8:p.Ser1001Pro
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3019T>C
  hgvsp: ENSP00000349597.4:p.Ser1007Pro
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3019T>C
  hgvsp: ENSP00000405934.2:p.Ser1007Pro
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3046T>C
  hgvsp: ENSP00000346595.6:p.Ser1016Pro
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29931
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser1001Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

3-4722316-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722316
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722316
    reference: chr 3
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26746C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3002C>G
  hgvsp: ENSP00000306253.8:p.Ser1001Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3047C>G
  hgvsp: ENSP00000346595.6:p.Ser1016Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2975C>G
  hgvsp: ENSP00000397885.2:p.Ser992Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3020C>G
  hgvsp: ENSP00000349597.4:p.Ser1007Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3020C>G
  hgvsp: ENSP00000405934.2:p.Ser1007Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3002C>G
  hgvsp: ENSP00000401671.2:p.Ser1001Cys
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7889
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser1001Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

3-4722326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722326
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722326
    reference: chr 3
allele count: 107
allele frequency: 9.078567792295944e-4
allele num: 117860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2985A>G
  hgvsp: ENST00000456211.2:c.2985A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3012A>G
  hgvsp: ENST00000302640.8:c.3012A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3057A>G
  hgvsp: ENST00000354582.6:c.3057A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3030A>G
  hgvsp: ENST00000423119.2:c.3030A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3012A>G
  hgvsp: ENST00000443694.2:c.3012A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26756A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3030A>G
  hgvsp: ENST00000357086.4:c.3030A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28870
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 14217
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 9.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1004Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

3-4722334-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722334
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722334
    reference: chr 3
allele count: 1
allele frequency: 8.784258608573437e-6
allele num: 113840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3038C>G
  hgvsp: ENSP00000405934.2:p.Ser1013Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3020C>G
  hgvsp: ENSP00000306253.8:p.Ser1007Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3020C>G
  hgvsp: ENSP00000401671.2:p.Ser1007Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26764C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3038C>G
  hgvsp: ENSP00000349597.4:p.Ser1013Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3065C>G
  hgvsp: ENSP00000346595.6:p.Ser1022Cys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2993C>G
  hgvsp: ENSP00000397885.2:p.Ser998Cys
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser1007Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-4722338-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722338
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722338
    reference: chr 3
allele count: 2
allele frequency: 1.783007934385308e-5
allele num: 112170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3069C>T
  hgvsp: ENST00000354582.6:c.3069C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26768C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.2997C>T
  hgvsp: ENST00000456211.2:c.2997C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3024C>T
  hgvsp: ENST00000443694.2:c.3024C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3042C>T
  hgvsp: ENST00000423119.2:c.3042C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3042C>T
  hgvsp: ENST00000357086.4:c.3042C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3024C>T
  hgvsp: ENST00000302640.8:c.3024C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser1008Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

3-4722345-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722345
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722345
    reference: chr 3
allele count: 1
allele frequency: 9.319664492078285e-6
allele num: 107300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3076A>G
  hgvsp: ENSP00000346595.6:p.Ser1026Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3031A>G
  hgvsp: ENSP00000401671.2:p.Ser1011Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3049A>G
  hgvsp: ENSP00000405934.2:p.Ser1017Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3049A>G
  hgvsp: ENSP00000349597.4:p.Ser1017Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3004A>G
  hgvsp: ENSP00000397885.2:p.Ser1002Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26775A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3031A>G
  hgvsp: ENSP00000306253.8:p.Ser1011Gly
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11853
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser1011Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

3-4722359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722359
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722359
    reference: chr 3
allele count: 1
allele frequency: 1.044146514638934e-5
allele num: 95772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3018G>A
  hgvsp: ENST00000456211.2:c.3018G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3090G>A
  hgvsp: ENST00000354582.6:c.3090G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3045G>A
  hgvsp: ENST00000443694.2:c.3045G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3063G>A
  hgvsp: ENST00000423119.2:c.3063G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3063G>A
  hgvsp: ENST00000357086.4:c.3063G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3045G>A
  hgvsp: ENST00000302640.8:c.3045G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26789G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14491
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19927
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly1015Gly
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS

3-4722363-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722363
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722363
    reference: chr 3
allele count: 1
allele frequency: 1.067418129029504e-5
allele num: 93684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3094A>G
  hgvsp: ENSP00000346595.6:p.Ser1032Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26793A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3049A>G
  hgvsp: ENSP00000401671.2:p.Ser1017Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3049A>G
  hgvsp: ENSP00000306253.8:p.Ser1017Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3022A>G
  hgvsp: ENSP00000397885.2:p.Ser1008Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3067A>G
  hgvsp: ENSP00000349597.4:p.Ser1023Gly
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3067A>G
  hgvsp: ENSP00000405934.2:p.Ser1023Gly
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13302
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser1017Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

3-4722364-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722364
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722364
    reference: chr 3
allele count: 1
allele frequency: 1.074968288435491e-5
allele num: 93026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3050G>A
  hgvsp: ENSP00000401671.2:p.Ser1017Asn
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3095G>A
  hgvsp: ENSP00000346595.6:p.Ser1032Asn
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3068G>A
  hgvsp: ENSP00000405934.2:p.Ser1023Asn
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3068G>A
  hgvsp: ENSP00000349597.4:p.Ser1023Asn
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3023G>A
  hgvsp: ENSP00000397885.2:p.Ser1008Asn
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26794G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3050G>A
  hgvsp: ENSP00000306253.8:p.Ser1017Asn
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21695
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser1017Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

3-4722367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722367
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722367
    reference: chr 3
allele count: 1
allele frequency: 1.101855524703601e-5
allele num: 90756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3098A>G
  hgvsp: ENSP00000346595.6:p.Asn1033Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3071A>G
  hgvsp: ENSP00000349597.4:p.Asn1024Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3053A>G
  hgvsp: ENSP00000401671.2:p.Asn1018Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3053A>G
  hgvsp: ENSP00000306253.8:p.Asn1018Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3026A>G
  hgvsp: ENSP00000397885.2:p.Asn1009Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3071A>G
  hgvsp: ENSP00000405934.2:p.Asn1024Ser
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26797A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20396
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn1018Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-4722371-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722371
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722371
    reference: chr 3
allele count: 1
allele frequency: 1.143641354071363e-5
allele num: 87440
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3057A>C
  hgvsp: ENST00000443694.2:c.3057A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3075A>C
  hgvsp: ENST00000357086.4:c.3075A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26801A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3075A>C
  hgvsp: ENST00000423119.2:c.3075A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3102A>C
  hgvsp: ENST00000354582.6:c.3102A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3030A>C
  hgvsp: ENST00000456211.2:c.3030A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3057A>C
  hgvsp: ENST00000302640.8:c.3057A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val1019Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-4722371-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722371
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722371
    reference: chr 3
allele count: 1
allele frequency: 1.143641354071363e-5
allele num: 87440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3057A>G
  hgvsp: ENST00000443694.2:c.3057A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3030A>G
  hgvsp: ENST00000456211.2:c.3030A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26801A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3102A>G
  hgvsp: ENST00000354582.6:c.3102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3075A>G
  hgvsp: ENST00000423119.2:c.3075A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3075A>G
  hgvsp: ENST00000357086.4:c.3075A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3057A>G
  hgvsp: ENST00000302640.8:c.3057A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24604
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17343
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val1019Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

3-4722388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722388
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722388
    reference: chr 3
allele count: 71
allele frequency: 9.223174850610548e-4
allele num: 76980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+13G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+13G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+13G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+13G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26818G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+13G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+13G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17321
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19296
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 9.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10490
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26960
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

3-4722404-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722404
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722404
    reference: chr 3
allele count: 3
allele frequency: 4.429875077522814e-5
allele num: 67722
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+29A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+29A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+29A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+29A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26834A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+29A>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+29A>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18699
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-4722405-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722405
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722405
    reference: chr 3
allele count: 1
allele frequency: 1.477323090559905e-5
allele num: 67690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+30T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+30T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+30T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+30T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+30T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26835T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+30T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5458
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/3-4722408-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722408
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722408
    reference: chr 3
allele count: 2
allele frequency: 3.015135982632817e-5
allele num: 66332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+33A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+33A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26838A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+33A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+33A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+33A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+33A>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19005
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7729
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

3-4722408-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722408
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722408
    reference: chr 3
allele count: 1
allele frequency: 1.507567991316408e-5
allele num: 66332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+33A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+33A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+33A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26838A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+33A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+33A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+33A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7729
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-4722416-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722416
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722415
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 61572
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+42delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26847delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+42delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+42delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+42delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+42delT
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+42delT
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20764
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4387
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4522
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: CT
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-4722419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722419
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722419
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 59878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3079+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3061+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3061+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3106+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3034+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3079+44G>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+26849G>A
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 21473
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7914
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5811
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4528
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4778
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5437
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/3-4722999-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4722999
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4722999
    reference: chr 3
allele count: 19
allele frequency: 1.606412120802192e-4
allele num: 118276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-49A>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27429A>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14474
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11817
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-4723013-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723013
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723013
    reference: chr 3
allele count: 1
allele frequency: 8.436255652291287e-6
allele num: 118536
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-35T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27443T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

3-4723013-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723013
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723012
    reference: chr 3
allele count: 2
allele frequency: 1.687251130458257e-5
allele num: 118536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-33delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27445delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-33delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-33delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-33delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-33delC
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-33delC
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2699
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7240
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: TC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

3-4723018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723018
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723018
    reference: chr 3
allele count: 1
allele frequency: 8.428576244900712e-6
allele num: 118644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-30C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-30C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27448C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-30C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-30C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-30C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-30C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD

3-4723020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723020
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723020
    reference: chr 3
allele count: 1
allele frequency: 8.416233230655287e-6
allele num: 118818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-28T>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27450T>C
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-4723021-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723021
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723021
    reference: chr 3
allele count: 1
allele frequency: 8.414816809438059e-6
allele num: 118838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-27C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-27C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-27C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-27C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-27C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27451C>T
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-27C>T
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-4723027-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723027
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723027
    reference: chr 3
allele count: 14
allele frequency: 1.174989509022241e-4
allele num: 119150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-21T>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27457T>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14065
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26365
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff

3-4723031-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723031
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723031
    reference: chr 3
allele count: 2
allele frequency: 1.675238302648552e-5
allele num: 119386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-17A>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27461A>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36504
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7241
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

3-4723036-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723036
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723036
    reference: chr 3
allele count: 1
allele frequency: 8.361204013377926e-6
allele num: 119600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3035-12C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3062-12C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3080-12C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3107-12C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3080-12C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27466C>G
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3062-12C>G
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5949
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-4723056-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723056
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723056
    reference: chr 3
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3088G>C
  hgvsp: ENSP00000349597.4:p.Asp1030His
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3070G>C
  hgvsp: ENSP00000306253.8:p.Asp1024His
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3043G>C
  hgvsp: ENSP00000397885.2:p.Asp1015His
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3088G>C
  hgvsp: ENSP00000405934.2:p.Asp1030His
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27486G>C
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3115G>C
  hgvsp: ENSP00000346595.6:p.Asp1039His
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3070G>C
  hgvsp: ENSP00000401671.2:p.Asp1024His
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp1024His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-4723077-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 4723077
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 4723077
    reference: chr 3
allele count: 1
allele frequency: 8.30813199960121e-6
allele num: 120364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000397885
  ensembl transcript: ENST00000456211
  gene symbol: ITPR1
  hgvsc: ENST00000456211.2:c.3064C>A
  hgvsp: ENSP00000397885.2:p.Gln1022Lys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000306253
  ensembl transcript: ENST00000302640
  gene symbol: ITPR1
  hgvsc: ENST00000302640.8:c.3091C>A
  hgvsp: ENSP00000306253.8:p.Gln1031Lys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000440564
  ensembl transcript: ENST00000544951
  gene symbol: ITPR1
  hgvsc: ENST00000544951.1:c.996+27507C>A
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000346595
  ensembl transcript: ENST00000354582
  gene symbol: ITPR1
  hgvsc: ENST00000354582.6:c.3136C>A
  hgvsp: ENSP00000346595.6:p.Gln1046Lys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000349597
  ensembl transcript: ENST00000357086
  gene symbol: ITPR1
  hgvsc: ENST00000357086.4:c.3109C>A
  hgvsp: ENSP00000349597.4:p.Gln1037Lys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000401671
  ensembl transcript: ENST00000443694
  gene symbol: ITPR1
  hgvsc: ENST00000443694.2:c.3091C>A
  hgvsp: ENSP00000401671.2:p.Gln1031Lys
  variant of: http://identifiers.org/hgnc/6180
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150995
  ensembl protein: ENSP00000405934
  ensembl transcript: ENST00000423119
  gene symbol: ITPR1
  hgvsc: ENST00000423119.2:c.3109C>A
  hgvsp: ENSP00000405934.2:p.Gln1037Lys
  variant of: http://identifiers.org/hgnc/6180
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln1031Lys
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 317
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.016e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.6e-1

DP
type: SiteQuality
SIO_000300: 1.460215e6

QD
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66196
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.773469029654326e-5
allele num: 11398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 2.688e1

VQSLOD
type: SiteQuality
SIO_000300: -2.449e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.461522e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

GenotypeQuality
all individuals: 445
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.94e-1

FS
type: SiteQuality
SIO_000300: 2.287e0

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.461842e6

QD
type: SiteQuality
SIO_000300: 6.38e0

GenotypeQuality
all individuals: 361
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022791850553171e-5
allele num: 66164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

DP
type: SiteQuality
SIO_000300: 1.457701e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

FS
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 1.553e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

GenotypeQuality
all individuals: 4033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1464
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.336448598130841e-4
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.242544731610338e-4
allele num: 16096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

FS
type: SiteQuality
SIO_000300: 1.136e0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.49e-1

DP
type: SiteQuality
SIO_000300: 1.458159e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
all individuals: 910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46342
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512172992590352e-5
allele num: 66130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.361e0

VQSLOD
type: SiteQuality
SIO_000300: -2.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.97e1

FS
type: SiteQuality
SIO_000300: 2.909e0

DP
type: SiteQuality
SIO_000300: 1.457288e6

MQ
type: SiteQuality
SIO_000300: 5.862e1

GenotypeQuality
all individuals: 658
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66116
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.338087444470423e-4
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 68
allele frequency: 4.223077878524407e-3
allele num: 16102
num of homozygotes: 2

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.386e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.75e-2

DP
type: SiteQuality
SIO_000300: 1.459232e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 1.738e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.05e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4039
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513912859175826e-5
allele num: 66054
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.77e-1

FS
type: SiteQuality
SIO_000300: 1.177e0

DP
type: SiteQuality
SIO_000300: 1.457908e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e0

VQSLOD
type: SiteQuality
SIO_000300: -3.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 3.043e1

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.863817097415507e-4
allele num: 16096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.7e-1

DP
type: SiteQuality
SIO_000300: 1.459782e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e0

FS
type: SiteQuality
SIO_000300: 1.111e0

QD
type: SiteQuality
SIO_000300: 1.106e1

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.057118628668343e-5
allele num: 66038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

MQ
type: SiteQuality
SIO_000300: 5.986e1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

FS
type: SiteQuality
SIO_000300: 8.837e0

VQSLOD
type: SiteQuality
SIO_000300: -1.998e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

DP
type: SiteQuality
SIO_000300: 1.459441e6

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46758
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4056
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516852228255923e-5
allele num: 65926
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 4.646e0

DP
type: SiteQuality
SIO_000300: 1.459766e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.319e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.471e0

GenotypeQuality
all individuals: 394
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.211180124223603e-5
allele num: 16100
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.648305084745763e-4
allele num: 11328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.207e1

FS
type: SiteQuality
SIO_000300: 1.625e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

VQSLOD
type: SiteQuality
SIO_000300: 6.73e-1

DP
type: SiteQuality
SIO_000300: 1.46089e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 479
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4004
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.34852043212776e-4
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.162e0

DP
type: SiteQuality
SIO_000300: 1.460521e6

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.797e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e0

GenotypeQuality
all individuals: 297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3980
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.272738677706687e-5
allele num: 15942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.132e0

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

VQSLOD
type: SiteQuality
SIO_000300: -4.81e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

DP
type: SiteQuality
SIO_000300: 1.458497e6

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.524e0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53003457878148e-5
allele num: 65358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 1.342e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.12e-1

DP
type: SiteQuality
SIO_000300: 1.4454e6

GenotypeQuality
all individuals: 337
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.071811361200429e-4
allele num: 9330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.445033e6

FS
type: SiteQuality
SIO_000300: 2.729e0

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.149e1

GenotypeQuality
all individuals: 818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3854
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 772
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.418485237483954e-5
allele num: 15580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65260
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

DP
type: SiteQuality
SIO_000300: 1.441759e6

FS
type: SiteQuality
SIO_000300: 3.038e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.066e1

VQSLOD
type: SiteQuality
SIO_000300: -7.16e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 801
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.069556142181841e-5
allele num: 65156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 2.537e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.043e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.439371e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.249e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 926
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7445
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.262689885142645e-5
allele num: 10796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.183e0

VQSLOD
type: SiteQuality
SIO_000300: 5.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

FS
type: SiteQuality
SIO_000300: 6.805e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.82e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

DP
type: SiteQuality
SIO_000300: 1.369378e6

GenotypeQuality
all individuals: 523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737740242588538e-5
allele num: 57546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12072
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.688e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.813e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.11569e6

QD
type: SiteQuality
SIO_000300: 3.51e0

GenotypeQuality
all individuals: 1668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25332
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 375
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.278772378516624e-4
allele num: 7820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.802646284746007e-5
allele num: 55474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.01642e6

FS
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.236e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

GenotypeQuality
all individuals: 4565
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.278772378516624e-4
allele num: 7820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.236e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

DP
type: SiteQuality
SIO_000300: 1.01642e6

GenotypeQuality
all individuals: 496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 479
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.872737719046251e-4
allele num: 6962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8884
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.16e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

FS
type: SiteQuality
SIO_000300: 1.621e0

DP
type: SiteQuality
SIO_000300: 9.93427e5

GenotypeQuality
all individuals: 454
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26708
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5277
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.142074006395614e-4
allele num: 8756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

MQ
type: SiteQuality
SIO_000300: 6.047e1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

DP
type: SiteQuality
SIO_000300: 9.71219e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 6.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

GenotypeQuality
all individuals: 6431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5663
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7336
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.453385672227674e-4
allele num: 8152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.573e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 8.89856e5

MQRankSum
type: SiteQuality
SIO_000300: 8.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

GenotypeQuality
all individuals: 435
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4531
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.234417344173442e-5
allele num: 47232
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.293e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: 4.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

DP
type: SiteQuality
SIO_000300: 8.2426e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 559
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3781
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.169385629989587e-5
allele num: 46096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.16441e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

GenotypeQuality
all individuals: 5946
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 320
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1552
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 357
bin: 8.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.586797841954935e-4
allele num: 6302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.340385695562629e-5
allele num: 42728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.31e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

DP
type: SiteQuality
SIO_000300: 7.93245e5

FS
type: SiteQuality
SIO_000300: 4.421e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5970
bin: 1.75e1
variant carriers: 26

GenotypeQuality
all individuals: 773
bin: 6.75e1
variant carriers: 32

GenotypeQuality
all individuals: 6669
bin: 3.25e1
variant carriers: 36

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 53

GenotypeQuality
all individuals: 1454
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 2678
bin: 9.75e1
variant carriers: 957

GenotypeQuality
all individuals: 1565
bin: 4.75e1
variant carriers: 24

GenotypeQuality
all individuals: 5384
bin: 2.75e1
variant carriers: 35

GenotypeQuality
all individuals: 460
bin: 7.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1818
bin: 6.25e1
variant carriers: 29

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 4.98883451323229e-4
allele num: 42094
num of homozygotes: 0

Latino
type: Population
allele count: 1030
allele frequency: 1.780159004493605e-1
allele num: 5786
num of homozygotes: 86

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.222222222222222e-4
allele num: 4500
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 2.24791265253693e-3
allele num: 6228
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.233806292412091e-3
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.150061500615006e-4
allele num: 4878
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 9.505703422053232e-3
allele num: 526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.93e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

QD
type: SiteQuality
SIO_000300: 1.539e1

DP
type: SiteQuality
SIO_000300: 7.90812e5

VQSLOD
type: SiteQuality
SIO_000300: 5.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 298
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7044
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.253509145044662e-4
allele num: 4702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.132e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

DP
type: SiteQuality
SIO_000300: 7.88311e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 814
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40210
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.328e0

DP
type: SiteQuality
SIO_000300: 1.718497e6

FS
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.018e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 409
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.123e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

DP
type: SiteQuality
SIO_000300: 1.719773e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.18e1

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 561
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 9.75e1
variant carriers: 159

GenotypeQuality
all individuals: 317
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 145
allele frequency: 1.481103166496425e-2
allele num: 9790
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.203876482272919e-4
allele num: 66452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.220452848967405e-5
allele num: 16076
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.190311418685121e-4
allele num: 11560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.508e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.44e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

DP
type: SiteQuality
SIO_000300: 1.727131e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.422e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43496
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503397678753984e-5
allele num: 66516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

DP
type: SiteQuality
SIO_000300: 1.732482e6

MQ
type: SiteQuality
SIO_000300: 5.888e1

FS
type: SiteQuality
SIO_000300: 3.36e0

QD
type: SiteQuality
SIO_000300: 1.771e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.667e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.783e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

GenotypeQuality
all individuals: 2301
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43760
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.735597e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

FS
type: SiteQuality
SIO_000300: 9.244e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: -7.435e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2300
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.026e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.366e0

DP
type: SiteQuality
SIO_000300: 1.740903e6

VQSLOD
type: SiteQuality
SIO_000300: -1.226e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.548e0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8211
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.305e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 8.904999999999999e0

DP
type: SiteQuality
SIO_000300: 1.746346e6

QD
type: SiteQuality
SIO_000300: 1.361e1

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

FS
type: SiteQuality
SIO_000300: 1.626e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.27e0

DP
type: SiteQuality
SIO_000300: 1.746812e6

VQSLOD
type: SiteQuality
SIO_000300: 1.97e-1

QD
type: SiteQuality
SIO_000300: 1.09e1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2299
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.055e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.7471e6

VQSLOD
type: SiteQuality
SIO_000300: -4.437e-1

FS
type: SiteQuality
SIO_000300: 1.238e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.749e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.16e-1

DP
type: SiteQuality
SIO_000300: 1.747183e6

FS
type: SiteQuality
SIO_000300: 8.55e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2300
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1800
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.029201502483945e-4
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.551e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

FS
type: SiteQuality
SIO_000300: 4.333e0

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.74736e6

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 1759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 1.044e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.388e1

DP
type: SiteQuality
SIO_000300: 1.733302e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7906
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1045
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.378e1

DP
type: SiteQuality
SIO_000300: 1.726537e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

FS
type: SiteQuality
SIO_000300: 2.598e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
all individuals: 1738
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51437138443832e-5
allele num: 66034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.726308e6

QD
type: SiteQuality
SIO_000300: 1.134e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.278e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.329e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7549
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 27
allele frequency: 4.132231404958678e-3
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.704618424302297e-4
allele num: 16196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.036269430051813e-4
allele num: 9650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 73
allele frequency: 1.122489774579451e-3
allele num: 65034
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.445e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 1.686827e6

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

GenotypeQuality
all individuals: 403
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593016216905088e-5
allele num: 62774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.104e0

QD
type: SiteQuality
SIO_000300: 2.139e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.602267e6

FS
type: SiteQuality
SIO_000300: 3.823e0

VQSLOD
type: SiteQuality
SIO_000300: -2.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 274
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7632
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36231
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.275835672365399e-4
allele num: 15676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.565197e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

FS
type: SiteQuality
SIO_000300: 3.01e0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 1319
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 478
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.055297593921486e-4
allele num: 9476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59052
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.755e0

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 1.504e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 1.465104e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.291322314049587e-4
allele num: 7744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14350
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

QD
type: SiteQuality
SIO_000300: 1.255e1

MQRankSum
type: SiteQuality
SIO_000300: -2.094e0

DP
type: SiteQuality
SIO_000300: 1.251809e6

VQSLOD
type: SiteQuality
SIO_000300: -9.812e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.188e0

GenotypeQuality
all individuals: 1024
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.958020050125313e-5
allele num: 51072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

QD
type: SiteQuality
SIO_000300: 2.463e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.064e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

DP
type: SiteQuality
SIO_000300: 1.215474e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.367989056087551e-4
allele num: 7310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14116
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.43e-1

FS
type: SiteQuality
SIO_000300: 3.847e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

DP
type: SiteQuality
SIO_000300: 1.205719e6

GenotypeQuality
all individuals: 305
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2678
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2782
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.179781734635267e-5
allele num: 13928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

DP
type: SiteQuality
SIO_000300: 1.164717e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

QD
type: SiteQuality
SIO_000300: 1.519e1

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

GenotypeQuality
all individuals: 193
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.369196757553427e-5
allele num: 13570
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.119e1

VQSLOD
type: SiteQuality
SIO_000300: -6.954e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.113355e6

MQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

GenotypeQuality
all individuals: 3011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.108903791809018e-5
allele num: 47418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

DP
type: SiteQuality
SIO_000300: 1.113355e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

QD
type: SiteQuality
SIO_000300: 1.119e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

VQSLOD
type: SiteQuality
SIO_000300: -6.954e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

GenotypeQuality
all individuals: 990
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4175
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 235
bin: 9.25e1
variant carriers: 3

Latino
type: Population
allele count: 1
allele frequency: 1.976284584980237e-4
allele num: 5060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.385425325574952e-4
allele num: 7218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 18
allele frequency: 3.636363636363636e-3
allele num: 4950
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.105590062111801e-3
allele num: 644
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.378309814491834e-4
allele num: 12614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 46
allele frequency: 1.110413749818954e-3
allele num: 41426
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.314e1

FS
type: SiteQuality
SIO_000300: 8.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

DP
type: SiteQuality
SIO_000300: 9.60931e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.407e0

GenotypeQuality
all individuals: 2782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5232
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36146
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.581551618814905e-4
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.498e1

DP
type: SiteQuality
SIO_000300: 8.51149e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

GenotypeQuality
all individuals: 759
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5223
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3704
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.524390243902439e-4
allele num: 6560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

DP
type: SiteQuality
SIO_000300: 8.50461e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

FS
type: SiteQuality
SIO_000300: 5.006e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

QD
type: SiteQuality
SIO_000300: 2.294e1

VQSLOD
type: SiteQuality
SIO_000300: -1.12e0

GenotypeQuality
all individuals: 588
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4615
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.091190108191654e-4
allele num: 6470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.35059e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

QD
type: SiteQuality
SIO_000300: 1.626e1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

FS
type: SiteQuality
SIO_000300: 1.139e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5386
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.545595054095827e-4
allele num: 6470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

FS
type: SiteQuality
SIO_000300: 1.139e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 8.35059e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.626e1

GenotypeQuality
all individuals: 986
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8348
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 5.888e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 8.02051e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

GenotypeQuality
all individuals: 3348
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8255
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1225
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.174e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.88e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 7.95114e5

QD
type: SiteQuality
SIO_000300: 1.006e1

GenotypeQuality
all individuals: 5548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7267
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3538
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4715
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17790
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.902801967794176e-4
allele num: 65454
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 2.309e0

DP
type: SiteQuality
SIO_000300: 1.834126e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.245e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

GenotypeQuality
all individuals: 7240
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1832
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524669146795145e-5
allele num: 65588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 4.772e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e-1

DP
type: SiteQuality
SIO_000300: 1.883799e6

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.205e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.372479240806643e-4
allele num: 8430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 4.772e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

QD
type: SiteQuality
SIO_000300: 1.205e1

DP
type: SiteQuality
SIO_000300: 1.883799e6

GenotypeQuality
all individuals: 1560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7237
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 876
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.03476821192053e-4
allele num: 9664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.861e0

QD
type: SiteQuality
SIO_000300: 1.59e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.316e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.909107e6

FS
type: SiteQuality
SIO_000300: 1.374e0

VQSLOD
type: SiteQuality
SIO_000300: -3.94e-1

GenotypeQuality
all individuals: 681
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1844
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520958812435359e-5
allele num: 65748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.279e1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

DP
type: SiteQuality
SIO_000300: 1.917603e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

FS
type: SiteQuality
SIO_000300: 1.131e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

GenotypeQuality
all individuals: 462
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.181195369714151e-4
allele num: 8466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65766
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.388e0

DP
type: SiteQuality
SIO_000300: 1.922991e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.536e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.926e1

GenotypeQuality
all individuals: 1566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7252
bin: 9.75e1
variant carriers: 14

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65944
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.648610456900612e-3
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
type: SiteQuality
SIO_000300: 1.946583e6

QD
type: SiteQuality
SIO_000300: 1.149e1

FS
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 891
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027642374882679e-5
allele num: 66058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.248e1

DP
type: SiteQuality
SIO_000300: 1.957414e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

GenotypeQuality
all individuals: 376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7236
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510984859931704e-5
allele num: 66182
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.585e-1

QD
type: SiteQuality
SIO_000300: 1.755e1

FS
type: SiteQuality
SIO_000300: 3.445e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

DP
type: SiteQuality
SIO_000300: 1.966296e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.119e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.99e-1

GenotypeQuality
all individuals: 38846
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e0

MQRankSum
type: SiteQuality
SIO_000300: -1.573e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.88e0

QD
type: SiteQuality
SIO_000300: 7.61e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.985701e6

VQSLOD
type: SiteQuality
SIO_000300: -2.752e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.458e0